mRNA_P-fluviatile_contig1.177.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-fluviatile_contig1.177.1
Unique Name	mRNA_P-fluviatile_contig1.177.1
Type	mRNA
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)

Homology

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BLAST of mRNA_P-fluviatile_contig1.177.1 vs. uniprot
Match: D7G0J2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J2_ECTSI)

HSP 1 Score: 362 bits (928), Expect = 3.220e-110
Identity = 219/391 (56.01%), Postives = 261/391 (66.75%), Query Frame = 1

Query: 1444 MQCPKRQVGVGNLSEISGEYKALANRYLTQGFPLIQVAQVCYTDNSCGDRKFLQETLGPASVVVEDDADSTCFADETEA-LQLLDFPDGLKANLVIVTREHCEVSARACSGCCVARVLQDWRCSGSTSSGVRVPPA--PSAP----ATLQLSAPDGYTVVFQLKRDERKDGIMSTAIQELLINNGVKLAGVSVKADLTHLFNSYGVRGTQEVDVGQLAGQHLDVMVGARSLQALTATLLRRQLPKGQVRTSNWETSLSQQQVHYAGLDSLASVLLYVHVHERMDPIFTEPRPGVESLPAETPLRLYTATNTRCMAEGELVAYGER-TWGDTNLVIGRRKGGYTYGGAADEEIHSRGVGAT-PQEDGGEPQALDQLQLGTLVLWDAVNSRLP 2589
            MQ PKRQVGV +L EI+   KALANRYLTQGF  IQV    +TD  CGD   +Q TLGPAS  V D A ST FA+E E  L  L+FP G    LV V  E+CE+S+R C      ++L+  R S     G  +  +  PS P    A +QLSA DGYTV+F LK +ER+ GI+ TA++ELL+N+ ++LAGVSV+ DLTHLFNSYGV GT+ VD+GQLAG HL V  GARSLQALTA LL R+L K  VRTSNWET+L++ Q  YAGLDS A VLL+  +  RMDPI TE RP V SLPA T LRLYT+TNTRC+AEG +  Y +  TWG T L IG   GG T         H  G     P E GG+ QALD+L+LG LVLWDA+NSRLP
Sbjct:    1 MQRPKRQVGVASLGEIAPHLKALANRYLTQGFRPIQVY---WTDLCCGDGNIIQSTLGPASQHVPDFALSTYFAEEAERQLPNLEFPAGASPILVRVASENCELSSRIC-----LQLLRRARASAPAVLGFDIEWSVRPSGPRRQVALVQLSARDGYTVLFHLKYEERRRGILPTALKELLVNDTIQLAGVSVRGDLTHLFNSYGVHGTKPVDIGQLAGVHLHVKNGARSLQALTAELLHRRLAKDAVRTSNWETTLTKDQEKYAGLDSYAGVLLFYRIWARMDPILTECRPDVLSLPANTHLRLYTSTNTRCVAEGTVEEYSQDGTWGSTGLTIGHVTGGATRMVVRLTVKHVPGAFVLHPGEGGGQVQALDELELGALVLWDAINSRLP 383

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BLAST of mRNA_P-fluviatile_contig1.177.1 vs. uniprot
Match: A0A6H5KSD7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSD7_9PHAE)

HSP 1 Score: 198 bits (504), Expect = 1.380e-50
Identity = 103/161 (63.98%), Postives = 123/161 (76.40%), Query Frame = 1

Query: 2119 ALTATLLRRQLPKGQVRTSNWETSLSQQQVHYAGLDSLASVLLYVHVHERMDPIFTEPRPGVESLPAETPLRLYTATNTRCMAEGELVAYGERTWGDTNLVIGRRKGGYTYGGAADEEIHSRGVGAT-PQEDGGEPQALDQLQLGTLVLWDAVNSRLPKKP 2598
            ALTA LLRR+LPKGQVRTSNWETSL+++Q+ YAGLDS A VLLY HV+ RMDP++TEPRP V SLPA+T LRLYT TNTRC+ EG L  YGE+TWG+T L IGRR+GG T       + +  G  A  P  DGGEPQAL++L+LGTL+LWDAV+   P  P
Sbjct:  422 ALTAGLLRRRLPKGQVRTSNWETSLTKEQITYAGLDSYAGVLLYYHVYSRMDPVYTEPRPDVLSLPADTTLRLYTVTNTRCVGEGTLAGYGEQTWGNTGLAIGRREGGTTRMVVRLTKKYIPGALALYPCHDGGEPQALEELELGTLMLWDAVHMCSPSFP 582

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BLAST of mRNA_P-fluviatile_contig1.177.1 vs. uniprot
Match: A0A4S8KW60_DENBC (3'-5' exonuclease domain-containing protein n=1 Tax=Dendrothele bispora (strain CBS 962.96) TaxID=1314807 RepID=A0A4S8KW60_DENBC)

HSP 1 Score: 95.5 bits (236), Expect = 2.340e-16
Identity = 113/464 (24.35%), Postives = 193/464 (41.59%), Query Frame = 1

Query:  919 HPGVLKLLPRDLLELFPAVILRRSAVDKKLMTRVEQTLVSPIGLKTLANHVKENHIRHYLTLQLRYYARMDRRRRHRQPSALSGHNELMNNPPRFSRFDDKAGYNGRSPSAAVLQSAFVAVMEGMEHWYHRQQQLVDGRNLGLDDSHKVTKGIRVMNS-KVFHGVHTVLNEHSQVVMQCPKRQVGVGNLSEISGEYKALANRYLTQGFPLIQVAQVCYTDNSCGD-RKFLQ--ETLGPASVVVEDDADSTCFADETEALQLLDFPDGLKANLVIVTREHCEVSARACSGCCVARVLQDWRCSGST-----------SSGVRVPPAPSAPATLQLSAPDGYTVVFQLKRDERKDGIMSTAIQELLINNGVKLAG--VSVKADLTHLF--NSYGVRGTQEVDVGQLAGQHLDVMVGARSLQALTATLLRRQLPKGQVRTSNWETS-LSQQQVHYAGLDSLASVLLY 2250
            HP +LK LP DL + FPA +  RS +DK L+  +   +   +      + ++E H+R +  L+LRY   +  ++++ +   ++    +      FS FDD+  Y G +PS   + + ++  ME +     +    + G  L  D S KV K +  +N    F G+ TVLNE  Q+  Q     V   +L  I      L       G+P   +    +TDN   D R F++   +LG  +VV  +  DS         L L++ P         V   HC+ +    +       L D   S S            S+G+    +    A +QL+ P    ++     D+    +++    +  I  G  + G    ++ D +        G      +++G  A     V     SL  L A  LR +L K ++R S W +  L+Q Q+HYA LD+  ++ ++
Sbjct:   26 HPDILKQLPPDLADEFPAFLTHRSGIDKGLLALIRAGVAHRVSSNAWEDILRELHLREHDILELRYLHSIQDQQKYNEKWNIAQTKYIP-----FSAFDDRTQYAGHAPSKRYINNVYMDFMESIRSCLDQCMSALTGHILQWDHSFKVPKYMMKLNGITAFVGLFTVLNELGQIRYQA---FVPTKSLVHIQSGLMELVKSLKEHGYPQPILG---FTDNVAADMRTFIECIPSLGE-NVVAVNPTDSL-------NLPLMELPSD-------VASVHCKTATEIENASHGILELLDLESSNSVVHLGFDMEWEYSTGIGGTGSKKT-ALIQLALPKSVYLLRVYLLDKLPTPLLTILRSDRFIKVGRNIGGDFAKLRRDFSDFLLPEKSGNHYNGTIELGSYAKCKQVVSEANSSLSTLVAATLRTKLSK-EMRASEWGSGVLTQSQIHYAALDAWVALEIF 461

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BLAST of mRNA_P-fluviatile_contig1.177.1 vs. uniprot
Match: A0A8K0UCG2_9AGAM (Uncharacterized protein n=1 Tax=Cristinia sonorae TaxID=1940300 RepID=A0A8K0UCG2_9AGAM)

HSP 1 Score: 81.6 bits (200), Expect = 5.620e-12
Identity = 137/614 (22.31%), Postives = 223/614 (36.32%), Query Frame = 1

Query:  637 LQPVFVCMWELLCGYMSGPPCPYC--------GRYNSVVCDGWNPQSRTVHGEHFNYLLIGKIYSCKACRAAASGXXXXXXXXXXXXXXXAGRKTRYKFAPWHPGVLKLLPRDLLELFPAVILRRSAVDKKLMTRVEQTLVSPIGLKTLANHVKENHIRHYLTLQLRYYARMDRRRRHRQPSALSGHNELMNNPPRFSRFDDKAGYNGRSPSAAVLQSAFVAVMEGMEHWYHRQQQLVDGRNLGLDDSHKVTKGIRVMNS-KVFHGVHTVLNEHSQVVMQCPKRQVGVGNLSEISGEY----KALANRYLTQGFPLIQVAQVCYTDNSCGDRKFLQETLGPASVVVEDDADSTCFADETEALQLLDFP------DGLKANLVIVTREHCEVSARACSGCCVARVLQDWRCSGSTSSGVRVPPAPSAPATLQLSAPDGYTVVFQLKRDERKDGIMSTAIQELLINNG--VKLAGVSVKADLTHLFNSYGVRGT-------QEVDVGQLAGQHLDVMVGARSLQALTATLLRRQLPKGQ-VRTS-NWETS-LSQQQVHYAGLDSLAS--VLLYVHVHERMDPIFTEPRPGVESLPAETPLRLYTATNTRCMAEGEL 2379
            + P    +W   C      PCP C        G    +   GW    R V        +IG  Y+C                           + +  +  W P +L  L R +   F   +  RS +   ++  +       IG +  A  ++ NH R Y  L L Y   + R+        LSG          +  F D++GY G +PSA   +  ++ +         +   ++  + L +D S KV K +  +N   VF+ ++  +NE  +V       +V +   S+    Y    +A++      G   +++    +TDN   D+  L+         V           E  +L+ L  P      D L     + +R    +     SG     +  +W     T     V       A + ++   G  V+       R++G +    Q L +     +K  GV V AD+  LF   G             V++G LA     V  G   L  LTAT+L+R LPK   +R S +WE + LS  Q+ YA LD+ AS  V   +   E   P+  + R G       T + L +A + R +A G +
Sbjct:  617 VDPTTFFVWLPHCLQRERIPCPECTAADRKKNGETIHLRALGWPKLPRRVVDIDKCIYIIGYRYNC------------------------VDERCKRTYQSWSPALLSALSRSVALQFTHHLTYRSGLTDAVVQMMRSCFQRGIGPQPFAEMIRTNHTRRYEQLHLLYLEMVYRKLHSPLSHMLSGFIP-------WPAFSDRSGYAGFTPSANYFRDFYINMTRARASEMDQVTAMLSSKILAIDHSFKVVKHLAKVNGIPVFNAMYGGVNEWGEV-------RVLLLTASKAHSHYMPALQAVSRSLELYGHDPLELV---FTDNPRADKPELERAFPSLQKDVVP-------VPEESSLERLTIPSNFLPIDALLTPFRVGSRCAEIIDCIPPSGDLCLAMDMEWPVDPETHLQGPV-------AVISIAYKQGVYVIPLNSAGFRRNGHVHLPAQLLSVLRSPRIKKVGVQVSADMARLFRDCGFSAACGDAPFVGAVNLGPLAKSRNAVSRGNLGLADLTATILKRFLPKDPTIRISRSWENATLSADQIEYAALDAFASWSVFTALQATETGHPVDVQTRSG-------TLVSLMSADHARVVAHGHI 1168

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BLAST of mRNA_P-fluviatile_contig1.177.1 vs. uniprot
Match: A0A4S4L6Y4_9AGAM (3'-5' exonuclease domain-containing protein (Fragment) n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4L6Y4_9AGAM)

HSP 1 Score: 71.2 bits (173), Expect = 8.630e-9
Identity = 129/566 (22.79%), Postives = 215/566 (37.99%), Query Frame = 1

Query:  649 FVCMWELLCGYMSGPPCPYC----------GRYNSVVCDGWNPQSRTVHGEHFNYLLIGKIYSCKACRAAASGXXXXXXXXXXXXXXXAGRKTRYKFAPWHPGVLKLLPRDLLELFPAVILRRSAVDKKLMTRVEQTLVSPIGLKTLANHVKENHIRHYLTLQLRYYARMDRRRRHRQPSALSGHNELMNNPPRFSRFDDKAGYNGRSPSAAVLQSAFVAVMEGMEHWYHRQQQLVDGRNLGLDDSHKVTKGI-RVMNSKVFHGVHTVLNEHSQVVMQCPKRQVGVGNLS---EISGEYKALANRYLTQGFPLIQVAQVCYTDNSCGDRKFLQETLGPASVVVEDDADSTCFADETEALQLLDFPDG------LKANLVIVTREHC---EVSARACSGCCVARVLQDWRCSGSTSSGVRVPPAPSAPATLQ-LSAPDGYTVVFQLKRDERKDGI-MSTAIQELLINNGVKLAGVSVKADLTHLFNS-YGVRGTQEVDVGQLAGQHLDVMVGAR--------SLQALTATLLRRQLPK-GQVRTSN-W-ETSLSQQQVHYAGLDSLA 2235
            FV +W        G  CP C           R  ++  +GW    R V    +N  ++G+ Y C                          +  +  +  W P +L +LP  L   F   +  R  +  +L+  +     +  G +   +  +  H R++  L ++Y   +    R + P+   G    M  PP F RF D  GY G  PS    Q  +   +E       +   ++    L +  SHKVTK + +V    VF  +HT +NE++++      RQ+ +       +     + ++    T G   +++    +TDN  GDR  L+ T  P+  ++ D     C      +L+ L  P+       L ++  + TR +    +++              +W    +      V       A +Q L   D +  + QL++  R   + +   +   L    ++  GVSVK DLT LFN  +    T +  VG L    L  +  +R        SL  L A  L R L K   +R S  W +  LSQ+Q  YA LD  A
Sbjct:  365 FVFIWLPHLLVPGGILCPACFKNRRXRTSDNRPVTLQLNGWPKSPRRVVDIEYNIFIVGQRYRC------------------------GHQDCKKTYQCWSPAILDILPPALAAQFTFSLTYRGGLTDRLVXLLRSCFRNGTGPRAFEDMXRSFHHRYHEQLHVQYLEXI----RSKLPAVKGGMYGSMKYPP-FGRFXDXNGYAGYVPSXTYFQLFYNHXIEEHARDMDQHMAMLXAXYLAVXHSHKVTKRLAKVAGETVFGALHTTVNEYTEI------RQMTLTPTKAHDQFMPSLQKISESLRTYGHDDVELV---FTDNVRGDRLELEHTF-PS--LLRD----VCPVPNHSSLEPLSIPEEGWSTWTLSSDYQVXTRMNLILDDLAKLEAGDELQVGFDMEWPVDRTVGISGHV-------AIIQILYGTDIF--ILQLRQFIRNGYLXLPHXLLSFLRAERIRKIGVSVKGDLTRLFNDCHFDLSTDQXFVGAL---ELGALAKSRNAAERVNISLAELXARXLXRHLEKEDSLRVSPLWSQPVLSQEQELYAALDVYA 873

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BLAST of mRNA_P-fluviatile_contig1.177.1 vs. uniprot
Match: A0A836DG68_9ROSI (Werner Syndrome exonuclease n=1 Tax=Salix suchowensis TaxID=1278906 RepID=A0A836DG68_9ROSI)

HSP 1 Score: 57.4 bits (137), Expect = 6.690e-5
Identity = 45/136 (33.09%), Postives = 67/136 (49.26%), Query Frame = 1

Query: 1849 PSAPATLQLSAPDGYTVVFQLKRDERKDGIMSTAIQELLINNGVKLAGVSVKADLTHLFNSYGVRGTQEVDVGQLAGQHLDVMVGARSLQALTATLLRRQLPK-GQVRTSNWETS-LSQQQVHYAGLDSLASVLLY 2250
            P   A +Q+ A +    V  +       GI + ++Q LL ++ V  AG+ +  D   +F  Y V      D+  LA Q L        LQALT TL+ ++L K  ++R  NWE   LS++Q+ YA  D+ AS  LY
Sbjct:  208 PGKAAVMQICASNSLCHVMHIFHS----GI-TRSLQFLLEDSTVVKAGIGIGGDRVKVFRDYNVSVKSVEDLSYLANQKLGGEPKTWGLQALTETLVCKELQKPNRIRLGNWEVDVLSKEQLQYAATDAFASWQLY 338

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig1.177.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig1.177.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6


Match Name	E-value	Identity	Description
D7G0J2_ECTSI	3.220e-110	56.01	3'-5' exonuclease domain-containing protein n=1 Ta...	[more]
A0A6H5KSD7_9PHAE	1.380e-50	63.98	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A4S8KW60_DENBC	2.340e-16	24.35	3'-5' exonuclease domain-containing protein n=1 Ta...	[more]
A0A8K0UCG2_9AGAM	5.620e-12	22.31	Uncharacterized protein n=1 Tax=Cristinia sonorae ...	[more]
A0A4S4L6Y4_9AGAM	8.630e-9	22.79	3'-5' exonuclease domain-containing protein (Fragm...	[more]
A0A836DG68_9ROSI	6.690e-5	33.09	Werner Syndrome exonuclease n=1 Tax=Salix suchowen...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig1	contig	P-fluviatile_contig1:2270102..2274097 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	366.7
Seed ortholog evalue	3e-98
Seed eggNOG ortholog	2880.D7G0J2
Preferred name	WRN
KEGG ko	ko:K10900,ko:K20777
GOs	GO:0000018,GO:0000019,GO:0000217,GO:0000287,GO:0000400,GO:0000403,GO:0000405,GO:0000723,GO:0000724,GO:0000725,GO:0000731,GO:0000738,GO:0000781,GO:0001302,GO:0001325,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003684,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006281,GO:0006284,GO:0006302,GO:0006308,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007154,GO:0007275,GO:0007568,GO:0007569,GO:0008026,GO:0008094,GO:0008104,GO:0008150,GO:0008152,GO:0008156,GO:0008296,GO:0008297,GO:0008309,GO:0008310,GO:0008311,GO:0008408,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009267,GO:0009314,GO:0009378,GO:0009411,GO:0009416,GO:0009605,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010212,GO:0010225,GO:0010259,GO:0010332,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010941,GO:0015630,GO:0016043,GO:0016462,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0022607,GO:0030145,GO:0031297,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032200,GO:0032356,GO:0032357,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0033036,GO:0033365,GO:0033554,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0040008,GO:0040009,GO:0042162,GO:0042592,GO:0042594,GO:0042623,GO:0042802,GO:0042803,GO:0042981,GO:0042995,GO:0043005,GO:0043067,GO:0043085,GO:0043138,GO:0043140,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044464,GO:0044806,GO:0044877,GO:0045005,GO:0045910,GO:0045911,GO:0045934,GO:0045935,GO:0045950,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0046983,GO:0048478,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051276,GO:0051336,GO:0051345,GO:0051641,GO:0051716,GO:0051880,GO:0060249,GO:0060255,GO:0060542,GO:0061749,GO:0061820,GO:0061821,GO:0061849,GO:0062037,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070035,GO:0070336,GO:0070337,GO:0070727,GO:0071103,GO:0071214,GO:0071478,GO:0071479,GO:0071480,GO:0071496,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090305,GO:0090329,GO:0090656,GO:0090657,GO:0090737,GO:0097159,GO:0097458,GO:0098530,GO:0098687,GO:0104004,GO:0120025,GO:0140097,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902570,GO:1905773,GO:2000104,GO:2000112,GO:2000113
EggNOG free text desc.	3'-5' exonuclease activity
EggNOG OGs	KOG4373@1,KOG4373@2759
EC	3.1.11.1,3.6.4.12
COG Functional cat.	C
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko01000,ko03032,ko03400
Hectar predicted targeting category	other localisation
Exons	8
Model size	2638
Cds size	2634
Stop	0
Start	0

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig1.177.1	prot_P-fluviatile_contig1.177.1	Porterinema fluviatile SAG_2381	polypeptide	P-fluviatile_contig1 2270104..2274097 -

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-fluviatile_contig1:2270102..2274097-
coding sequence from alignment at P-fluviatile_contig1:2270102..2274097-

protein sequence of mRNA_P-fluviatile_contig1.177.1

>prot_P-fluviatile_contig1.177.1 ID=prot_P-fluviatile_contig1.177.1|Name=mRNA_P-fluviatile_contig1.177.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=878bp
GPKGRHQLRPSKPSKQSTAAPSAGSLDRWFQPPTVVAEDQQSGNLVVGAG
EFTATAAGEGGASSTHDAGGVPAAAPSAAPALVAALASAPASAPAMQALA
SAPASAPAMQAPAAPAAASAAAPAVPAASAAPTASSQTTTAPDSCEDTQD
VAPSPPMIKFAAAVKRMVDRVTTRVGHGSQTQGVEGKLERGSPWVYPDDP
LLAPIPDRETHYLQPVFVCMWELLCGYMSGPPCPYCGRYNSVVCDGWNPQ
SRTVHGEHFNYLLIGKIYSCKACRAAASGKGKGKAGSGGAAGPGAGRKTR
YKFAPWHPGVLKLLPRDLLELFPAVILRRSAVDKKLMTRVEQTLVSPIGL
KTLANHVKENHIRHYLTLQLRYYARMDRRRRHRQPSALSGHNELMNNPPR
FSRFDDKAGYNGRSPSAAVLQSAFVAVMEGMEHWYHRQQQLVDGRNLGLD
DSHKVTKGIRVMNSKVFHGVHTVLNEHSQVVMQCPKRQVGVGNLSEISGE
YKALANRYLTQGFPLIQVAQVCYTDNSCGDRKFLQETLGPASVVVEDDAD
STCFADETEALQLLDFPDGLKANLVIVTREHCEVSARACSGCCVARVLQD
WRCSGSTSSGVRVPPAPSAPATLQLSAPDGYTVVFQLKRDERKDGIMSTA
IQELLINNGVKLAGVSVKADLTHLFNSYGVRGTQEVDVGQLAGQHLDVMV
GARSLQALTATLLRRQLPKGQVRTSNWETSLSQQQVHYAGLDSLASVLLY
VHVHERMDPIFTEPRPGVESLPAETPLRLYTATNTRCMAEGELVAYGERT
WGDTNLVIGRRKGGYTYGGAADEEIHSRGVGATPQEDGGEPQALDQLQLG
TLVLWDAVNSRLPKKPPPTSTAVALDAG

mRNA from alignment at P-fluviatile_contig1:2270102..2274097-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-fluviatile_contig1.177.1 ID=mRNA_P-fluviatile_contig1.177.1|Name=mRNA_P-fluviatile_contig1.177.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3996bp|location=Sequence derived from alignment at P-fluviatile_contig1:2270102..2274097- (Porterinema fluviatile SAG_2381)
GGCCCAAAAGGACGGCATCAACTCAGGCCTAGCAAACCGTCGAAGCAGTC
AACAGCAGCGCCGTCAGCAGGGTCACTTGACAGGTGGTTCCAGCCCCCGA
CAGTAGTAGCGGAGGACCAGCAATCTGGAAATCTTGTGGTGGGTGCTGGT
GAGTTCACGGCAACAGCAGCAGGAGAAGGCGGCGCATCCAGCACACATGA
TGCGGGCGGCGTACCAGCAGCAGCGCCGTCAGCAGCACCAGCACTAGTAG
CAGCGCTGGCGTCAGCGCCGGCATCAGCACCAGCAATGCAAGCGCTGGCG
TCAGCGCCGGCATCAGCACCAGCAATGCAAGCGCCGGCAGCGCCGGCAGC
AGCGTCAGCAGCAGCACCGGCAGTACCAGCAGCATCAGCAGCACCAACAG
CCTCAAGCCAAACAACAACAGCGCCGGATTCATGCGAAGATACCCAAGAT
GTTGCGCCAAGTCCTCCCATGATCAAGTTCGCCGCGGCCGTGAAGCGCAT
GGTTGACAGAGTCACGACGCGGGTTGGCCACGGCTCGCAGACGCAGGGGG
TAGAAGGGAAGCTTGAGCGCGGTTCACCATGGGTTTATCCGGACGACCCC
CTACTCGCACCTATACCGGACCGGGAAACCCACTACCTCCAGCCGGTGTT
TGTCTGCATGTGGGAACTGCTCTGCGGCTACATGTCCGGGCCTCCATGCC
CGTACTGCGGGAGATACAATAGCGTGAGTATCATCTGTGTGGTGGCGTAA
GGGTATCTGCTTGCACTTAGATATTCAGGTGACGTGGAGACTCATGTCAT
TGTAGTTTTTTTTCGCTGTTTTGGCTGCGTGGTATGGGCCGTATGCGACA
CGTGTGCTGTAGTAGTTGGTATCCTCATGGGTACCCCATCAACGCATGAA
TATTGTCCATCCCAACGTTGGGCTTCGCTGCCCTTTTGCTGCTTTAGACT
ACCCACCGGTTCGCCGTTTCCTCCCGACTCCATCGTCTCACGAACTGCCG
TCGTAATCATCGCTGAACATCGCAGGTGGTTTGTGACGGCTGGAACCCCC
AGAGCCGAACCGTTCACGGAGAGCACTTCAACTACCTACTGATCGGGAAG
ATCTACTCGTGCAAGGCGTGCAGAGCGGCAGCCTCTGGTAAGGGTAAAGG
CAAAGCGGGCAGCGGTGGAGCGGCCGGCCCTGGAGCAGGTAGAAAAACCC
GCTACAAGTTCGCGCCTTGGCATCCAGGCGTCCTGAAGCTGCTTCCGCGT
GATCTGTTGGAGTTGTTCCCGGCTGTCATCTTGCGGAGATCAGCTGTCGA
CAAGAAGCTCATGACTCGCGTCGAACAGACGCTTGTGAGTCCCATCGGGT
TGAAAACCCTAGCCAACCACGTGAAGGAGAACCACATTAGGCACTACCTG
ACCTTACAGCTACGGTGAGGAATGCTCAAGAAGTATCTGAAACCCGTACC
GTACGCCACGAACGGATGCAACTCTGTTTCAGTGGTTCATGACTTGCCTT
TGCCTCCACTTGTGAATATGGTATGTAAACGGCCATTGGAAAATGTGCCA
TCCAAAATGCTAAGTCTGATGTGTGTGTCTCTGTGTGTGTGTGTGTGTGT
GTGCTGTTGACGGCGTGTACCAAAATCGATGCAGATACTACGCCCGCATG
GATAGGCGGAGAAGGCATCGTCAGCCATCAGCATTGTCGGGGCACAACGA
GCTGATGAACAACCCCCCTCGGTTCAGTCGGTTCGATGATAAAGCTGGGT
ACAACGGCCGGTCCCCCAGCGCTGCTGTTCTTCAGTCTGCGTTTGTCGCT
GTAATGGAGGGCATGGAGCATTGGTACCATCGGCAGCAGCAATTGGTTGA
CGGCAGGAATCTTGGGTTGGATGACTCGCACAAGGTCACAAAGGGAATCC
GAGTGATGAACTCAAAAGTCTTCCACGGAGTCCACACTGTCCTCAACGAG
CACAGTCAAGTGGTGATGCAGGTGAGGGGGCGAGGAGTATAAAAATGCAC
TTCGTAGATGCAGATATACGCAGCGTCCCGGGAGTCGCTTCGTGCGTTGT
GCTCTCTCGCTTGATATCCACCTGGGGCACCAGAAGCTTTCGAACAATTC
TCCACCAGCTCCTCCCTGCCCTCCCCCTCGGTTTTGCTCGGCATGTCTGC
ATCCCTCTTCTTATCGCCTCTAGTGCCCGAAGAGACAGGTCGGAGTGGGA
AACCTGAGCGAGATAAGCGGAGAGTACAAGGCGCTCGCGAACCGGTACCT
TACACAAGGCTTTCCCCTTATCCAGGCACGTTCGTCGTCTTGTGTGGGTG
ACCCAGGGTGTGTTGTCCTGTCTCTGCATGCTGTTTTGTATTTCAATGTC
GTGGATCGTATGTTGTCGCTTCGACGCCACTTCTTGCGCGATATACCCTC
TACCACCTGCACATTTAGCTTTCGGAACTCCATTTATCGGGAAACGTTGC
TCAGGTGTGCTACACCGACAACTCCTGTGGGGACAGGAAGTTCCTCCAAG
AGACACTCGGACCAGCATCTGTGGTTGTTGAGGATGACGCCGATAGTACG
TGCTTTGCTGACGAAACTGAGGCGCTACAGCTTCTGGACTTCCCCGATGG
TCTCAAGGCCAACCTCGTCATCGTGACCAGGGAGCACTGTGAGGTTTCTG
CCCGGGCTTGCTCGGGTTGCTGCGTCGCGCGCGTGCTTCAGGACTGGCGG
TGCTCGGGTTCGACATCGAGTGGAGTGCGCGTGCCACCGGCCCCGTCGGC
CCCTGCAACCCTCCAGCTGTCAGCACCCGACGGCTACACGGTTGTCTTTC
AGCTCAAGCGTGACGAGCGGAAGGACGGCATCATGTCGACAGCCATCCAA
GAGCTTCTTATCAACAACGGCGTGAAGCTGGTGCGTCTGTTTTGGTGTGC
GACATGTGGACCTGGCCTGTGTCCCTCTTCCATAACGCAGTTGAGTGCCT
TAGCAAATATCCTGATCTACCCCCGCCTGATTGCATGTGTTCCTATTTTG
ACTGTTGCTGCTTCTCAGGCGGGTGTTTCGGTAAAGGCGGATCTCACGCA
CCTTTTCAACAGCTACGGTGTGAGAGGTACACAGGAAGTGGATGTTGGAC
AGCTGGCCGGGCAGCATCTCGATGTCATGGTTGGGGCGCGCTCGCTCCAG
GCTCTGACAGCGACGTTGCTTCGGCGACAACTCCCCAAGGGTCAAGTGCG
AACGAGCAACTGGGAGACTTCTCTGAGTCAACAGCAGGTAAGCTGATGCT
GAGTTTGCCCGCCTCCCGGCCGTAGTATGCAGCGGGATTGTCCATGGGTA
AAGTCGGTGCCAGTGTTCTTCGTCGGTTCACGTCAAAGTTGCCCCTGTTT
CTTATTTGTCGCCATTTTCGCGCTTCGAAATGTCATTCTGTAATGACGCA
GGTTCACTATGCTGGGCTTGATTCCCTGGCATCAGTTCTCCTGTATGTCC
ACGTACACGAGCGAATGGATCCTATCTTTACGGAGCCTCGGCCAGGTGTT
GAGTCGCTTCCTGCCGAGACCCCTTTACGCCTGTACACGGCGACCAACAC
TCGTTGCATGGCTGAGGGAGAACTCGTGGCCTATGGGGAGCGCACGTGGG
GAGACACGAACCTTGTGATCGGGCGCCGGAAGGGGGGCTACACGTATGGT
GGTGCGGCTGACGAAGAAATACATTCCCGGGGCGTTGGCGCTACACCCCA
AGAAGATGGTGGCGAACCCCAGGCGCTCGACCAGCTTCAACTTGGGACCC
TCGTCCTGTGGGATGCGGTAAGTTGGGAAGAGGGTGTACTGCTGTGGACT
TTACTACTGTCATTTTGTCGCTAGGGGATGGGTGCGCGTTTGTTTTCCAT
TTTCTCTTCGCCGTTGTCTACAGTGTGCTTGCCATGTCCCCTGCATGGTG
TCCGTGCCGCCCACTTCATGGATTCCCGCAGGTGAACTCGCGACTGCCGA
AGAAACCGCCACCCACGTCTACAGCAGTCGCTCTTGATGCCGGGGC

Coding sequence (CDS) from alignment at P-fluviatile_contig1:2270102..2274097-

>mRNA_P-fluviatile_contig1.177.1 ID=mRNA_P-fluviatile_contig1.177.1|Name=mRNA_P-fluviatile_contig1.177.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=5268bp|location=Sequence derived from alignment at P-fluviatile_contig1:2270102..2274097- (Porterinema fluviatile SAG_2381)
GGCCCAAAAGGACGGCATCAACTCAGGCCTAGCAAACCGTCGAAGCAGTC
AACAGCAGCGCCGTCAGCAGGGTCACTTGACAGGTGGTTCCAGCCCCCGA
CAGTAGTAGCGGAGGACCAGCAATCTGGAAATCTTGTGGTGGGTGCTGGT
GAGTTCACGGCAACAGCAGCAGGAGAAGGCGGCGCATCCAGCACACATGA
TGCGGGCGGCGTACCAGCAGCAGCGCCGTCAGCAGCACCAGCACTAGTAG
CAGCGCTGGCGTCAGCGCCGGCATCAGCACCAGCAATGCAAGCGCTGGCG
TCAGCGCCGGCATCAGCACCAGCAATGCAAGCGCCGGCAGCGCCGGCAGC
AGCGTCAGCAGCAGCACCGGCAGTACCAGCAGCATCAGCAGCACCAACAG
CCTCAAGCCAAACAACAACAGCGCCGGATTCATGCGAAGATACCCAAGAT
GTTGCGCCAAGTCCTCCCATGATCAAGTTCGCCGCGGCCGTGAAGCGCAT
GGTTGACAGAGTCACGACGCGGGTTGGCCACGGCTCGCAGACGCAGGGGG
TAGAAGGGAAGCTTGAGCGCGGTTCACCATGGGTTTATCCGGACGACCCC
CTACTCGCACCTATACCGGACCGGGAAACCCACTACCTCCAGCCGGTGTT
TGTCTGCATGTGGGAACTGCTCTGCGGCTACATGTCCGGGCCTCCATGCC
CGTACTGCGGGAGATACAATAGCGGCCCAAAAGGACGGCATCAACTCAGG
CCTAGCAAACCGTCGAAGCAGTCAACAGCAGCGCCGTCAGCAGGGTCACT
TGACAGGTGGTTCCAGCCCCCGACAGTAGTAGCGGAGGACCAGCAATCTG
GAAATCTTGTGGTGGGTGCTGGTGAGTTCACGGCAACAGCAGCAGGAGAA
GGCGGCGCATCCAGCACACATGATGCGGGCGGCGTACCAGCAGCAGCGCC
GTCAGCAGCACCAGCACTAGTAGCAGCGCTGGCGTCAGCGCCGGCATCAG
CACCAGCAATGCAAGCGCTGGCGTCAGCGCCGGCATCAGCACCAGCAATG
CAAGCGCCGGCAGCGCCGGCAGCAGCGTCAGCAGCAGCACCGGCAGTACC
AGCAGCATCAGCAGCACCAACAGCCTCAAGCCAAACAACAACAGCGCCGG
ATTCATGCGAAGATACCCAAGATGTTGCGCCAAGTCCTCCCATGATCAAG
TTCGCCGCGGCCGTGAAGCGCATGGTTGACAGAGTCACGACGCGGGTTGG
CCACGGCTCGCAGACGCAGGGGGTAGAAGGGAAGCTTGAGCGCGGTTCAC
CATGGGTTTATCCGGACGACCCCCTACTCGCACCTATACCGGACCGGGAA
ACCCACTACCTCCAGCCGGTGTTTGTCTGCATGTGGGAACTGCTCTGCGG
CTACATGTCCGGGCCTCCATGCCCGTACTGCGGGAGATACAATAGCGTGG
TTTGTGACGGCTGGAACCCCCAGAGCCGAACCGTTCACGGAGAGCACTTC
AACTACCTACTGATCGGGAAGATCTACTCGTGCAAGGCGTGCAGAGCGGC
AGCCTCTGGTAAGGGTAAAGGCAAAGCGGGCAGCGGTGGAGCGGCCGGCC
CTGGAGCAGGTAGAAAAACCCGCTACAAGTTCGCGCCTTGGCATCCAGGC
GTCCTGAAGCTGCTTCCGCGTGATCTGTTGGAGTTGTTCCCGGCTGTCAT
CTTGCGGAGATCAGCTGTCGACAAGAAGCTCATGACTCGCGTCGAACAGA
CGCTTGTGAGTCCCATCGGGTTGAAAACCCTAGCCAACCACGTGAAGGAG
AACCACATTAGGCACTACCTGACCTTACAGCTACGGTGGTTTGTGACGGC
TGGAACCCCCAGAGCCGAACCGTTCACGGAGAGCACTTCAACTACCTACT
GATCGGGAAGATCTACTCGTGCAAGGCGTGCAGAGCGGCAGCCTCTGGTA
AGGGTAAAGGCAAAGCGGGCAGCGGTGGAGCGGCCGGCCCTGGAGCAGGT
AGAAAAACCCGCTACAAGTTCGCGCCTTGGCATCCAGGCGTCCTGAAGCT
GCTTCCGCGTGATCTGTTGGAGTTGTTCCCGGCTGTCATCTTGCGGAGAT
CAGCTGTCGACAAGAAGCTCATGACTCGCGTCGAACAGACGCTTGTGAGT
CCCATCGGGTTGAAAACCCTAGCCAACCACGTGAAGGAGAACCACATTAG
GCACTACCTGACCTTACAGCTACGATACTACGCCCGCATGGATAGGCGGA
GAAGGCATCGTCAGCCATCAGCATTGTCGGGGCACAACGAGCTGATGAAC
AACCCCCCTCGGTTCAGTCGGTTCGATGATAAAGCTGGGTACAACGGCCG
GTCCCCCAGCGCTGCTGTTCTTCAGTCTGCGTTTGTCGCTGTAATGGAGG
GCATGGAGCATTGGTACCATCGGCAGCAGCAATTGGTTGACGGCAGGAAT
CTTGGGTTGGATGACTCGCACAAGGTCACAAAGGGAATCCGAGTGATGAA
CTCAAAAGTCTTCCACGGAGTCCACACTGTCCTCAACGAGCACAGTCAAG
TGGTGATGCAGATACTACGCCCGCATGGATAGGCGGAGAAGGCATCGTCA
GCCATCAGCATTGTCGGGGCACAACGAGCTGATGAACAACCCCCCTCGGT
TCAGTCGGTTCGATGATAAAGCTGGGTACAACGGCCGGTCCCCCAGCGCT
GCTGTTCTTCAGTCTGCGTTTGTCGCTGTAATGGAGGGCATGGAGCATTG
GTACCATCGGCAGCAGCAATTGGTTGACGGCAGGAATCTTGGGTTGGATG
ACTCGCACAAGGTCACAAAGGGAATCCGAGTGATGAACTCAAAAGTCTTC
CACGGAGTCCACACTGTCCTCAACGAGCACAGTCAAGTGGTGATGCAGTG
CCCGAAGAGACAGGTCGGAGTGGGAAACCTGAGCGAGATAAGCGGAGAGT
ACAAGGCGCTCGCGAACCGGTACCTTACACAAGGCTTTCCCCTTATCCAG
GTGCCCGAAGAGACAGGTCGGAGTGGGAAACCTGAGCGAGATAAGCGGAG
AGTACAAGGCGCTCGCGAACCGGTACCTTACACAAGGCTTTCCCCTTATC
CAGGTTGCTCAGGTGTGCTACACCGACAACTCCTGTGGGGACAGGAAGTT
CCTCCAAGAGACACTCGGACCAGCATCTGTGGTTGTTGAGGATGACGCCG
ATAGTACGTGCTTTGCTGACGAAACTGAGGCGCTACAGCTTCTGGACTTC
CCCGATGGTCTCAAGGCCAACCTCGTCATCGTGACCAGGGAGCACTGTGA
GGTTTCTGCCCGGGCTTGCTCGGGTTGCTGCGTCGCGCGCGTGCTTCAGG
ACTGGCGGTGCTCGGGTTCGACATCGAGTGGAGTGCGCGTGCCACCGGCC
CCGTCGGCCCCTGCAACCCTCCAGCTGTCAGCACCCGACGGCTACACGGT
TGTCTTTCAGCTCAAGCGTGACGAGCGGAAGGACGGCATCATGTCGACAG
CCATCCAAGAGCTTCTTATCAACAACGGCGTGAAGCTGTTGCTCAGGTGT
GCTACACCGACAACTCCTGTGGGGACAGGAAGTTCCTCCAAGAGACACTC
GGACCAGCATCTGTGGTTGTTGAGGATGACGCCGATAGTACGTGCTTTGC
TGACGAAACTGAGGCGCTACAGCTTCTGGACTTCCCCGATGGTCTCAAGG
CCAACCTCGTCATCGTGACCAGGGAGCACTGTGAGGTTTCTGCCCGGGCT
TGCTCGGGTTGCTGCGTCGCGCGCGTGCTTCAGGACTGGCGGTGCTCGGG
TTCGACATCGAGTGGAGTGCGCGTGCCACCGGCCCCGTCGGCCCCTGCAA
CCCTCCAGCTGTCAGCACCCGACGGCTACACGGTTGTCTTTCAGCTCAAG
CGTGACGAGCGGAAGGACGGCATCATGTCGACAGCCATCCAAGAGCTTCT
TATCAACAACGGCGTGAAGCTGGCGGGTGTTTCGGTAAAGGCGGATCTCA
CGCACCTTTTCAACAGCTACGGTGTGAGAGGTACACAGGAAGTGGATGTT
GGACAGCTGGCCGGGCAGCATCTCGATGTCATGGTTGGGGCGCGCTCGCT
CCAGGCTCTGACAGCGACGTTGCTTCGGCGACAACTCCCCAAGGGTCAAG
TGCGAACGAGCAACTGGGAGACTTCTCTGAGTCAACAGCAGGCGGGTGTT
TCGGTAAAGGCGGATCTCACGCACCTTTTCAACAGCTACGGTGTGAGAGG
TACACAGGAAGTGGATGTTGGACAGCTGGCCGGGCAGCATCTCGATGTCA
TGGTTGGGGCGCGCTCGCTCCAGGCTCTGACAGCGACGTTGCTTCGGCGA
CAACTCCCCAAGGGTCAAGTGCGAACGAGCAACTGGGAGACTTCTCTGAG
TCAACAGCAGGTTCACTATGCTGGGCTTGATTCCCTGGCATCAGTTCTCC
TGTATGTCCACGTACACGAGCGAATGGATCCTATCTTTACGGAGCCTCGG
CCAGGTGTTGAGTCGCTTCCTGCCGAGACCCCTTTACGCCTGTACACGGC
GACCAACACTCGTTGCATGGCTGAGGGAGAACTCGTGGCCTATGGGGAGC
GCACGTGGGGAGACACGAACCTTGTGATCGGGCGCCGGAAGGGGGGCTAC
ACGTATGGTGGTGCGGCTGACGAAGAAATACATTCCCGGGGCGTTGGCGC
TACACCCCAAGAAGATGGTGGCGAACCCCAGGCGCTCGACCAGCTTCAAC
TTGGGACCCTCGTCCTGTGGGATGCGGTTCACTATGCTGGGCTTGATTCC
CTGGCATCAGTTCTCCTGTATGTCCACGTACACGAGCGAATGGATCCTAT
CTTTACGGAGCCTCGGCCAGGTGTTGAGTCGCTTCCTGCCGAGACCCCTT
TACGCCTGTACACGGCGACCAACACTCGTTGCATGGCTGAGGGAGAACTC
GTGGCCTATGGGGAGCGCACGTGGGGAGACACGAACCTTGTGATCGGGCG
CCGGAAGGGGGGCTACACGTATGGTGGTGCGGCTGACGAAGAAATACATT
CCCGGGGCGTTGGCGCTACACCCCAAGAAGATGGTGGCGAACCCCAGGCG
CTCGACCAGCTTCAACTTGGGACCCTCGTCCTGTGGGATGCGGTGAACTC
GCGACTGCCGAAGAAACCGCCACCCACGTCTACAGCAGTCGCTCTTGATG
CCGGGGTGAACTCGCGACTGCCGAAGAAACCGCCACCCACGTCTACAGCA
GTCGCTCTTGATGCCGGG