prot_P-fluviatile_contig1.177.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig1.177.1
Unique Nameprot_P-fluviatile_contig1.177.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length878
Homology
BLAST of mRNA_P-fluviatile_contig1.177.1 vs. uniprot
Match: D7G0J2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J2_ECTSI)

HSP 1 Score: 362 bits (928), Expect = 3.220e-110
Identity = 219/391 (56.01%), Postives = 261/391 (66.75%), Query Frame = 0
Query:  482 MQCPKRQVGVGNLSEISGEYKALANRYLTQGFPLIQVAQVCYTDNSCGDRKFLQETLGPASVVVEDDADSTCFADETEA-LQLLDFPDGLKANLVIVTREHCEVSARACSGCCVARVLQDWRCSGSTSSGVRVPPA--PSAP----ATLQLSAPDGYTVVFQLKRDERKDGIMSTAIQELLINNGVKLAGVSVKADLTHLFNSYGVRGTQEVDVGQLAGQHLDVMVGARSLQALTATLLRRQLPKGQVRTSNWETSLSQQQVHYAGLDSLASVLLYVHVHERMDPIFTEPRPGVESLPAETPLRLYTATNTRCMAEGELVAYGER-TWGDTNLVIGRRKGGYTYGGAADEEIHSRGVGAT-PQEDGGEPQALDQLQLGTLVLWDAVNSRLP 863
            MQ PKRQVGV +L EI+   KALANRYLTQGF  IQV    +TD  CGD   +Q TLGPAS  V D A ST FA+E E  L  L+FP G    LV V  E+CE+S+R C      ++L+  R S     G  +  +  PS P    A +QLSA DGYTV+F LK +ER+ GI+ TA++ELL+N+ ++LAGVSV+ DLTHLFNSYGV GT+ VD+GQLAG HL V  GARSLQALTA LL R+L K  VRTSNWET+L++ Q  YAGLDS A VLL+  +  RMDPI TE RP V SLPA T LRLYT+TNTRC+AEG +  Y +  TWG T L IG   GG T         H  G     P E GG+ QALD+L+LG LVLWDA+NSRLP
Sbjct:    1 MQRPKRQVGVASLGEIAPHLKALANRYLTQGFRPIQVY---WTDLCCGDGNIIQSTLGPASQHVPDFALSTYFAEEAERQLPNLEFPAGASPILVRVASENCELSSRIC-----LQLLRRARASAPAVLGFDIEWSVRPSGPRRQVALVQLSARDGYTVLFHLKYEERRRGILPTALKELLVNDTIQLAGVSVRGDLTHLFNSYGVHGTKPVDIGQLAGVHLHVKNGARSLQALTAELLHRRLAKDAVRTSNWETTLTKDQEKYAGLDSYAGVLLFYRIWARMDPILTECRPDVLSLPANTHLRLYTSTNTRCVAEGTVEEYSQDGTWGSTGLTIGHVTGGATRMVVRLTVKHVPGAFVLHPGEGGGQVQALDELELGALVLWDAINSRLP 383          
BLAST of mRNA_P-fluviatile_contig1.177.1 vs. uniprot
Match: A0A6H5KSD7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSD7_9PHAE)

HSP 1 Score: 198 bits (504), Expect = 1.380e-50
Identity = 103/161 (63.98%), Postives = 123/161 (76.40%), Query Frame = 0
Query:  707 ALTATLLRRQLPKGQVRTSNWETSLSQQQVHYAGLDSLASVLLYVHVHERMDPIFTEPRPGVESLPAETPLRLYTATNTRCMAEGELVAYGERTWGDTNLVIGRRKGGYTYGGAADEEIHSRGVGAT-PQEDGGEPQALDQLQLGTLVLWDAVNSRLPKKP 866
            ALTA LLRR+LPKGQVRTSNWETSL+++Q+ YAGLDS A VLLY HV+ RMDP++TEPRP V SLPA+T LRLYT TNTRC+ EG L  YGE+TWG+T L IGRR+GG T       + +  G  A  P  DGGEPQAL++L+LGTL+LWDAV+   P  P
Sbjct:  422 ALTAGLLRRRLPKGQVRTSNWETSLTKEQITYAGLDSYAGVLLYYHVYSRMDPVYTEPRPDVLSLPADTTLRLYTVTNTRCVGEGTLAGYGEQTWGNTGLAIGRREGGTTRMVVRLTKKYIPGALALYPCHDGGEPQALEELELGTLMLWDAVHMCSPSFP 582          
BLAST of mRNA_P-fluviatile_contig1.177.1 vs. uniprot
Match: A0A4S8KW60_DENBC (3'-5' exonuclease domain-containing protein n=1 Tax=Dendrothele bispora (strain CBS 962.96) TaxID=1314807 RepID=A0A4S8KW60_DENBC)

HSP 1 Score: 95.5 bits (236), Expect = 2.340e-16
Identity = 113/464 (24.35%), Postives = 193/464 (41.59%), Query Frame = 0
Query:  307 HPGVLKLLPRDLLELFPAVILRRSAVDKKLMTRVEQTLVSPIGLKTLANHVKENHIRHYLTLQLRYYARMDRRRRHRQPSALSGHNELMNNPPRFSRFDDKAGYNGRSPSAAVLQSAFVAVMEGMEHWYHRQQQLVDGRNLGLDDSHKVTKGIRVMNS-KVFHGVHTVLNEHSQVVMQCPKRQVGVGNLSEISGEYKALANRYLTQGFPLIQVAQVCYTDNSCGD-RKFLQ--ETLGPASVVVEDDADSTCFADETEALQLLDFPDGLKANLVIVTREHCEVSARACSGCCVARVLQDWRCSGST-----------SSGVRVPPAPSAPATLQLSAPDGYTVVFQLKRDERKDGIMSTAIQELLINNGVKLAG--VSVKADLTHLF--NSYGVRGTQEVDVGQLAGQHLDVMVGARSLQALTATLLRRQLPKGQVRTSNWETS-LSQQQVHYAGLDSLASVLLY 750
            HP +LK LP DL + FPA +  RS +DK L+  +   +   +      + ++E H+R +  L+LRY   +  ++++ +   ++    +      FS FDD+  Y G +PS   + + ++  ME +     +    + G  L  D S KV K +  +N    F G+ TVLNE  Q+  Q     V   +L  I      L       G+P   +    +TDN   D R F++   +LG  +VV  +  DS         L L++ P         V   HC+ +    +       L D   S S            S+G+    +    A +QL+ P    ++     D+    +++    +  I  G  + G    ++ D +        G      +++G  A     V     SL  L A  LR +L K ++R S W +  L+Q Q+HYA LD+  ++ ++
Sbjct:   26 HPDILKQLPPDLADEFPAFLTHRSGIDKGLLALIRAGVAHRVSSNAWEDILRELHLREHDILELRYLHSIQDQQKYNEKWNIAQTKYIP-----FSAFDDRTQYAGHAPSKRYINNVYMDFMESIRSCLDQCMSALTGHILQWDHSFKVPKYMMKLNGITAFVGLFTVLNELGQIRYQA---FVPTKSLVHIQSGLMELVKSLKEHGYPQPILG---FTDNVAADMRTFIECIPSLGE-NVVAVNPTDSL-------NLPLMELPSD-------VASVHCKTATEIENASHGILELLDLESSNSVVHLGFDMEWEYSTGIGGTGSKKT-ALIQLALPKSVYLLRVYLLDKLPTPLLTILRSDRFIKVGRNIGGDFAKLRRDFSDFLLPEKSGNHYNGTIELGSYAKCKQVVSEANSSLSTLVAATLRTKLSK-EMRASEWGSGVLTQSQIHYAALDAWVALEIF 461          
BLAST of mRNA_P-fluviatile_contig1.177.1 vs. uniprot
Match: A0A8K0UCG2_9AGAM (Uncharacterized protein n=1 Tax=Cristinia sonorae TaxID=1940300 RepID=A0A8K0UCG2_9AGAM)

HSP 1 Score: 81.6 bits (200), Expect = 5.620e-12
Identity = 137/614 (22.31%), Postives = 223/614 (36.32%), Query Frame = 0
Query:  213 LQPVFVCMWELLCGYMSGPPCPYC--------GRYNSVVCDGWNPQSRTVHGEHFNYLLIGKIYSCKACRAAASGXXXXXXXXXXXXXXXAGRKTRYKFAPWHPGVLKLLPRDLLELFPAVILRRSAVDKKLMTRVEQTLVSPIGLKTLANHVKENHIRHYLTLQLRYYARMDRRRRHRQPSALSGHNELMNNPPRFSRFDDKAGYNGRSPSAAVLQSAFVAVMEGMEHWYHRQQQLVDGRNLGLDDSHKVTKGIRVMNS-KVFHGVHTVLNEHSQVVMQCPKRQVGVGNLSEISGEY----KALANRYLTQGFPLIQVAQVCYTDNSCGDRKFLQETLGPASVVVEDDADSTCFADETEALQLLDFP------DGLKANLVIVTREHCEVSARACSGCCVARVLQDWRCSGSTSSGVRVPPAPSAPATLQLSAPDGYTVVFQLKRDERKDGIMSTAIQELLINNG--VKLAGVSVKADLTHLFNSYGVRGT-------QEVDVGQLAGQHLDVMVGARSLQALTATLLRRQLPKGQ-VRTS-NWETS-LSQQQVHYAGLDSLAS--VLLYVHVHERMDPIFTEPRPGVESLPAETPLRLYTATNTRCMAEGEL 793
            + P    +W   C      PCP C        G    +   GW    R V        +IG  Y+C                           + +  +  W P +L  L R +   F   +  RS +   ++  +       IG +  A  ++ NH R Y  L L Y   + R+        LSG          +  F D++GY G +PSA   +  ++ +         +   ++  + L +D S KV K +  +N   VF+ ++  +NE  +V       +V +   S+    Y    +A++      G   +++    +TDN   D+  L+         V           E  +L+ L  P      D L     + +R    +     SG     +  +W     T     V       A + ++   G  V+       R++G +    Q L +     +K  GV V AD+  LF   G             V++G LA     V  G   L  LTAT+L+R LPK   +R S +WE + LS  Q+ YA LD+ AS  V   +   E   P+  + R G       T + L +A + R +A G +
Sbjct:  617 VDPTTFFVWLPHCLQRERIPCPECTAADRKKNGETIHLRALGWPKLPRRVVDIDKCIYIIGYRYNC------------------------VDERCKRTYQSWSPALLSALSRSVALQFTHHLTYRSGLTDAVVQMMRSCFQRGIGPQPFAEMIRTNHTRRYEQLHLLYLEMVYRKLHSPLSHMLSGFIP-------WPAFSDRSGYAGFTPSANYFRDFYINMTRARASEMDQVTAMLSSKILAIDHSFKVVKHLAKVNGIPVFNAMYGGVNEWGEV-------RVLLLTASKAHSHYMPALQAVSRSLELYGHDPLELV---FTDNPRADKPELERAFPSLQKDVVP-------VPEESSLERLTIPSNFLPIDALLTPFRVGSRCAEIIDCIPPSGDLCLAMDMEWPVDPETHLQGPV-------AVISIAYKQGVYVIPLNSAGFRRNGHVHLPAQLLSVLRSPRIKKVGVQVSADMARLFRDCGFSAACGDAPFVGAVNLGPLAKSRNAVSRGNLGLADLTATILKRFLPKDPTIRISRSWENATLSADQIEYAALDAFASWSVFTALQATETGHPVDVQTRSG-------TLVSLMSADHARVVAHGHI 1168          
BLAST of mRNA_P-fluviatile_contig1.177.1 vs. uniprot
Match: A0A4S4L6Y4_9AGAM (3'-5' exonuclease domain-containing protein (Fragment) n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4L6Y4_9AGAM)

HSP 1 Score: 71.2 bits (173), Expect = 8.630e-9
Identity = 129/566 (22.79%), Postives = 215/566 (37.99%), Query Frame = 0
Query:  217 FVCMWELLCGYMSGPPCPYC----------GRYNSVVCDGWNPQSRTVHGEHFNYLLIGKIYSCKACRAAASGXXXXXXXXXXXXXXXAGRKTRYKFAPWHPGVLKLLPRDLLELFPAVILRRSAVDKKLMTRVEQTLVSPIGLKTLANHVKENHIRHYLTLQLRYYARMDRRRRHRQPSALSGHNELMNNPPRFSRFDDKAGYNGRSPSAAVLQSAFVAVMEGMEHWYHRQQQLVDGRNLGLDDSHKVTKGI-RVMNSKVFHGVHTVLNEHSQVVMQCPKRQVGVGNLS---EISGEYKALANRYLTQGFPLIQVAQVCYTDNSCGDRKFLQETLGPASVVVEDDADSTCFADETEALQLLDFPDG------LKANLVIVTREHC---EVSARACSGCCVARVLQDWRCSGSTSSGVRVPPAPSAPATLQ-LSAPDGYTVVFQLKRDERKDGI-MSTAIQELLINNGVKLAGVSVKADLTHLFNS-YGVRGTQEVDVGQLAGQHLDVMVGAR--------SLQALTATLLRRQLPK-GQVRTSN-W-ETSLSQQQVHYAGLDSLA 745
            FV +W        G  CP C           R  ++  +GW    R V    +N  ++G+ Y C                          +  +  +  W P +L +LP  L   F   +  R  +  +L+  +     +  G +   +  +  H R++  L ++Y   +    R + P+   G    M  PP F RF D  GY G  PS    Q  +   +E       +   ++    L +  SHKVTK + +V    VF  +HT +NE++++      RQ+ +       +     + ++    T G   +++    +TDN  GDR  L+ T  P+  ++ D     C      +L+ L  P+       L ++  + TR +    +++              +W    +      V       A +Q L   D +  + QL++  R   + +   +   L    ++  GVSVK DLT LFN  +    T +  VG L    L  +  +R        SL  L A  L R L K   +R S  W +  LSQ+Q  YA LD  A
Sbjct:  365 FVFIWLPHLLVPGGILCPACFKNRRXRTSDNRPVTLQLNGWPKSPRRVVDIEYNIFIVGQRYRC------------------------GHQDCKKTYQCWSPAILDILPPALAAQFTFSLTYRGGLTDRLVXLLRSCFRNGTGPRAFEDMXRSFHHRYHEQLHVQYLEXI----RSKLPAVKGGMYGSMKYPP-FGRFXDXNGYAGYVPSXTYFQLFYNHXIEEHARDMDQHMAMLXAXYLAVXHSHKVTKRLAKVAGETVFGALHTTVNEYTEI------RQMTLTPTKAHDQFMPSLQKISESLRTYGHDDVELV---FTDNVRGDRLELEHTF-PS--LLRD----VCPVPNHSSLEPLSIPEEGWSTWTLSSDYQVXTRMNLILDDLAKLEAGDELQVGFDMEWPVDRTVGISGHV-------AIIQILYGTDIF--ILQLRQFIRNGYLXLPHXLLSFLRAERIRKIGVSVKGDLTRLFNDCHFDLSTDQXFVGAL---ELGALAKSRNAAERVNISLAELXARXLXRHLEKEDSLRVSPLWSQPVLSQEQELYAALDVYA 873          
BLAST of mRNA_P-fluviatile_contig1.177.1 vs. uniprot
Match: A0A836DG68_9ROSI (Werner Syndrome exonuclease n=1 Tax=Salix suchowensis TaxID=1278906 RepID=A0A836DG68_9ROSI)

HSP 1 Score: 57.4 bits (137), Expect = 6.690e-5
Identity = 45/136 (33.09%), Postives = 67/136 (49.26%), Query Frame = 0
Query:  617 PSAPATLQLSAPDGYTVVFQLKRDERKDGIMSTAIQELLINNGVKLAGVSVKADLTHLFNSYGVRGTQEVDVGQLAGQHLDVMVGARSLQALTATLLRRQLPK-GQVRTSNWETS-LSQQQVHYAGLDSLASVLLY 750
            P   A +Q+ A +    V  +       GI + ++Q LL ++ V  AG+ +  D   +F  Y V      D+  LA Q L        LQALT TL+ ++L K  ++R  NWE   LS++Q+ YA  D+ AS  LY
Sbjct:  208 PGKAAVMQICASNSLCHVMHIFHS----GI-TRSLQFLLEDSTVVKAGIGIGGDRVKVFRDYNVSVKSVEDLSYLANQKLGGEPKTWGLQALTETLVCKELQKPNRIRLGNWEVDVLSKEQLQYAATDAFASWQLY 338          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.177.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G0J2_ECTSI3.220e-11056.013'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KSD7_9PHAE1.380e-5063.98Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4S8KW60_DENBC2.340e-1624.353'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A8K0UCG2_9AGAM5.620e-1222.31Uncharacterized protein n=1 Tax=Cristinia sonorae ... [more]
A0A4S4L6Y4_9AGAM8.630e-922.793'-5' exonuclease domain-containing protein (Fragm... [more]
A0A836DG68_9ROSI6.690e-533.09Werner Syndrome exonuclease n=1 Tax=Salix suchowen... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 599..759
e-value: 5.8E-22
score: 79.8
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 647..750
e-value: 4.4E-6
score: 26.5
NoneNo IPR availablePANTHERPTHR13620:SF45WERNER SYNDROME-LIKE EXONUCLEASEcoord: 644..750
NoneNo IPR availablePANTHERPTHR136203-5 EXONUCLEASEcoord: 644..750
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 615..754

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:2270104..2274097 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.177.1mRNA_P-fluviatile_contig1.177.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig1 2270102..2274097 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig1.177.1 ID=prot_P-fluviatile_contig1.177.1|Name=mRNA_P-fluviatile_contig1.177.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=878bp
GPKGRHQLRPSKPSKQSTAAPSAGSLDRWFQPPTVVAEDQQSGNLVVGAG
EFTATAAGEGGASSTHDAGGVPAAAPSAAPALVAALASAPASAPAMQALA
SAPASAPAMQAPAAPAAASAAAPAVPAASAAPTASSQTTTAPDSCEDTQD
VAPSPPMIKFAAAVKRMVDRVTTRVGHGSQTQGVEGKLERGSPWVYPDDP
LLAPIPDRETHYLQPVFVCMWELLCGYMSGPPCPYCGRYNSVVCDGWNPQ
SRTVHGEHFNYLLIGKIYSCKACRAAASGKGKGKAGSGGAAGPGAGRKTR
YKFAPWHPGVLKLLPRDLLELFPAVILRRSAVDKKLMTRVEQTLVSPIGL
KTLANHVKENHIRHYLTLQLRYYARMDRRRRHRQPSALSGHNELMNNPPR
FSRFDDKAGYNGRSPSAAVLQSAFVAVMEGMEHWYHRQQQLVDGRNLGLD
DSHKVTKGIRVMNSKVFHGVHTVLNEHSQVVMQCPKRQVGVGNLSEISGE
YKALANRYLTQGFPLIQVAQVCYTDNSCGDRKFLQETLGPASVVVEDDAD
STCFADETEALQLLDFPDGLKANLVIVTREHCEVSARACSGCCVARVLQD
WRCSGSTSSGVRVPPAPSAPATLQLSAPDGYTVVFQLKRDERKDGIMSTA
IQELLINNGVKLAGVSVKADLTHLFNSYGVRGTQEVDVGQLAGQHLDVMV
GARSLQALTATLLRRQLPKGQVRTSNWETSLSQQQVHYAGLDSLASVLLY
VHVHERMDPIFTEPRPGVESLPAETPLRLYTATNTRCMAEGELVAYGERT
WGDTNLVIGRRKGGYTYGGAADEEIHSRGVGATPQEDGGEPQALDQLQLG
TLVLWDAVNSRLPKKPPPTSTAVALDAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR0025623'-5'_exonuclease_dom
IPR012337RNaseH-like_sf