mRNA_P-fluviatile_contig14.2280.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig14.2280.1 vs. uniprot
Match: D7FNR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNR3_ECTSI) HSP 1 Score: 381 bits (979), Expect = 8.730e-127 Identity = 226/395 (57.22%), Postives = 261/395 (66.08%), Query Frame = 1
Query: 1 SGVFAAEVYPDLSPARTIVDLLRFYLRRALL----YRGTSKISGGVGWEQSVGVSDSPASTNPLLAEDREGAGFLVRTVPVQVSRIKELRQRLQAAAGVDDNGVAIEGHRPADALLLLSGSHPGRRLPLMRHFLPDANDELRLATTMRDSGHLPKRLAFWAVANPMVEAHEAGVDKVRKKVELGAEVILTQPPLVWEPFERWLRGVHASGALTRGAMAGYEGEARAGEHATATATASTTSRAAFERRRPSRTPTAV--GREGG---AAILVGMPVITSPKGLRFWLELCGVGDNPVLCTRAFEAFGGDS-----TNSGQPQALEEEKESKAGRTASAARAALGLNPYGEDWFETTLSKLKSLGDSGLGVAGMHVMAPGPGPRRRASELASRGVFG 1143
SGVF AE++PDL PA T+ L R YLRRA R E++ G SD+ + E EG G+LVRTVPVQ+SR KELR+RL AAGVD G + RPADALLL+SGSHPGRRLP + FLPD DELRLAT+MR+SG LPK LA WAVANP+ EA EAGVD+VRKKVELGAEVILTQPPL WE FERWL+GVHASGAL R A A G + GE AT TS + E R +R P A GR GG A ILVG+PVITSPKGLRFWL+LCG+ D P +C + FEAFG S T S +P A AG + A A +PYG++W ETT+ KLKSL SGLGVAG+H+MAPG PRRRA ELA+ G FG
Sbjct: 68 SGVFDAEIHPDLPPAGTMAGLARCYLRRAKAAVFEMRPDGNSDSSSEGEKAAG-SDTDTVGRCVAKEGNEG-GYLVRTVPVQLSRQKELRRRLAVAAGVDAEGAKVRNVRPADALLLVSGSHPGRRLPFAKSFLPDVYDELRLATSMRNSGRLPKGLALWAVANPLAEADEAGVDRVRKKVELGAEVILTQPPLAWELFERWLQGVHASGALGRSAAARNAGLTKPGEGTDATVKIFETSGSTGEER-STRHPLAAAEGRRGGDPAARILVGLPVITSPKGLRFWLDLCGLHDKPGVCKQVFEAFGQPSSVVARTGSEEPHAH------PAGEKQATAVAGSPPSPYGQEWLETTMLKLKSLDGSGLGVAGVHLMAPGRAPRRRAIELAATGFFG 453
BLAST of mRNA_P-fluviatile_contig14.2280.1 vs. uniprot
Match: A0A6H5L748_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L748_9PHAE) HSP 1 Score: 361 bits (927), Expect = 5.880e-119 Identity = 216/393 (54.96%), Postives = 260/393 (66.16%), Query Frame = 1
Query: 1 SGVFAAEVYPDLSPARTIVDLLRFYLRRALLY-------RGTSKISGGVGWEQSVGVSDSPASTNPLLAEDREGAGFLVRTVPVQVSRIKELRQRLQAAAGVDDNGVAIEGHRPADALLLLSGSHPGRRLPLMRHFLPDANDELRLATTMRDSGHLPKRLAFWAVANPMVEAHEAGVDKVRKKVELGAEVILTQPPLVWEPFERWLRGVHASGALTRGAMAGYEGEARAGEHATATATASTTSRAAFERRRPSRTPTAV--GREGG---AAILVGMPVITSPKGLRFWLELCGVGDNPVLCTRAFEAFGGDSTNSGQPQALEEEKESKAGRTASAARAALGLNPYGEDWFETTLSKLKSLGDSGLGVAGMHVMAPGPGPRRRASELASRGVFG 1143
SGVF AE++PDL PA T+ L+R+YLRRA R + S G E+S G SD+ + + EG G+LVRTVPVQ+SR K + A GVD G + RPADALLL+SGSHPGRRLP + FL D DELRLAT+MR+SGHLPK LA WAVANP+ E EAG+D+VRKKVELGAEVILTQPPL WE FERWL+GVH SGAL A A +G A+ GE AT S + E R +R PTA G+ GG A ILVG+PVIT+PKGLRFWL LCG+ DNP +C +AFEAFG S+ + EE AG ++A A +PYG++W ETT+ KLKSL SGLGVAG+H+MAPG PRRRA +LA+ G FG
Sbjct: 68 SGVFDAEIHPDLPPAGTMAGLVRYYLRRAKAAVFEMRPDRNSDSSSKG---EKSTG-SDTDTVGRSVARDGIEG-GYLVRTVPVQLSRQKA--RDAACADGVDAEGAKVPNVRPADALLLVSGSHPGRRLPFAKSFLMDVYDELRLATSMRNSGHLPKGLALWAVANPLTEVDEAGIDRVRKKVELGAEVILTQPPLAWELFERWLQGVHTSGALGGSAAARNDGLAKPGEGTDATMKMFEASGSTGEER-STRRPTAAAEGQRGGDSTARILVGLPVITAPKGLRFWLNLCGLHDNPGVCKQAFEAFGHPSSVVART-GTEEPHGHPAGEKQASAVAGSTPSPYGQEWLETTMLKLKSLDGSGLGVAGVHLMAPGRAPRRRAIQLAAAGFFG 451
BLAST of mRNA_P-fluviatile_contig14.2280.1 vs. uniprot
Match: A0A8J9WJA9_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WJA9_9CHLO) HSP 1 Score: 135 bits (341), Expect = 6.060e-33 Identity = 96/286 (33.57%), Postives = 128/286 (44.76%), Query Frame = 1
Query: 1 SGVFAAEVYPDLSPARTIVDLLRFYLRRALLYRGTSKISGGVGWEQSVGVSDSPASTNPLLAEDREGA--GFLVRTVPVQVSRIKELRQRLQAAAGVDDNGVAIEGHRPADALLLLSGSHPGRRLPLMRHFLPDANDELRLATTMRDSGHLPKRLAFWAVANPMVEAHEAGVDKVRKKVELGAEVILTQPPLVWEPFERWLRGVHASGALTRGAMAGYEGEARAGEHATATATASTTSRAAFERRRPSRTPTAVGREGGAAILVGMPVITSPKGLRFWLELCGVGD 852
+G F VYPDL D L F R T K+ L E G G LVRT VQ+ ++LR+RL AG++++G + G RPADALLL+SGSHP RR L D+ L LA ++RD G LP + + WAVANP+V+ D + +KV GAEVILTQPPL++ FE W GV G ++ A I++G+P++TS + + FWLELC D
Sbjct: 59 TGSFDVGVYPDLPAVMKWSDFLDFKKLRK-----TGKLQ----------------DLEKLRIESAAGGREGLLVRTCGVQLRGHEQLRRRLLLRAGLEEDGRSAAGVRPADALLLVSGSHPLRRALAWSGVLQDSVSALHLAHSLRDQGLLPPQTSLWAVANPLVDTP----DTLERKVAAGAEVILTQPPLIYSKFESWFDGVDRLGVASK-----------------------------------------------AKIVIGIPMLTSSRSMLFWLELCSSAD 272
BLAST of mRNA_P-fluviatile_contig14.2280.1 vs. uniprot
Match: E1ZJ72_CHLVA (Methylenetetrahydrofolate reductase (NAD(P)H) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZJ72_CHLVA) HSP 1 Score: 134 bits (338), Expect = 1.200e-32 Identity = 82/195 (42.05%), Postives = 108/195 (55.38%), Query Frame = 1
Query: 10 FAAEVYPDLSPARTIVDLLRFYLRRALLYRGTSKISGGVGWEQSVGVSDSPASTNPLLAEDREGAGFLVRTVPVQVSRIKELRQRLQAAAGVDDNGVAIEGHRPADALLLLSGSHPGRRLPLMRHFLPDANDELRLATTMRDSGHLPKRLAFWAVANPMVEAHEAGVDKVRKKVELGAEVILTQPPLVWEPFERW 594
F AE+YPDL A T DLLR ++ A G E VG + P P + VRTV Q+ +LR + +AAGVD G G RPADALL +SGSHP R LP +L D+ D L LA+ MR+ G+LP L+ WAV NPM+ A V ++R+K + GAEV++TQP L+W+ +RW
Sbjct: 60 FQAEIYPDLPLATTWRDLLRRTVQTA-------------GHESEVGRVEPPPKVCPAER-------WTVRTVAAQLRSRDQLRSMMLSAAGVDPAGDPKPGVRPADALLFVSGSHPARHLPGAGRWLQDSFDLLLLASAMREEGYLPASLSLWAVENPML----APVKRLRQKADAGAEVVVTQPALLWDRVQRW 230
BLAST of mRNA_P-fluviatile_contig14.2280.1 vs. uniprot
Match: A0A2P6TC01_CHLSO (Ribonuclease Z n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TC01_CHLSO) HSP 1 Score: 135 bits (339), Expect = 6.930e-31 Identity = 98/283 (34.63%), Postives = 130/283 (45.94%), Query Frame = 1
Query: 10 FAAEVYPDLSPARTIVDLLRFYLRRALLYRGTSKISGGVGWEQSVGVSDSPASTNPLLAEDREGAGFLVRTVPVQVSRIKELRQRLQAAAGVDDNGVAIEGHRPADALLLLSGSHPGRRLPLMRHFLPDANDELRLATTMRDSGHLPKRLAFWAVANPMVEAHEAGVDKVRKKVELGAEVILTQPPLVWEPFERWLRGVHASGALTRGAMAGYEGEARAGEHATATATASTTSRAAFERRRPSRTPTAVGREGGAAILVGMPVITSPKGLRFWLELCGVGDNP 858
F A+VYPDL A T DLLR + Q+ G + P S +P A + VRTV Q+ +LR + +AAGV +G G ADALL +SGSHP RRLP +L + D L LA+ MR+ G+LP L+ WAV NPM+ VD++++K ++GAEV+LTQPPL+WE W A A R R EH +++G+PV+ S L FWL LCGV P
Sbjct: 854 FGAQVYPDLPLASTWRDLLRRTV-------------------QTAGRAAEPGSVDPPPAAC-PAERWTVRTVAAQLRSRDQLRSMMLSAAGVGPDGEPRPGAARADALLFVSGSHPARRLPGAGRWLQSSFDLLLLASAMREEGYLPPALSLWAVENPMLSP----VDRLQQKADVGAEVVLTQPPLLWERTAAW-----AEEAAAR----------RVSEH--------------------------------IKVVLGLPVVPSVGNLDFWLRLCGVRGQP 1065
BLAST of mRNA_P-fluviatile_contig14.2280.1 vs. uniprot
Match: A0A2P6VAW2_9CHLO (5,10-methylenetetrahydrofolate reductase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VAW2_9CHLO) HSP 1 Score: 127 bits (319), Expect = 1.270e-29 Identity = 96/279 (34.41%), Postives = 126/279 (45.16%), Query Frame = 1
Query: 10 FAAEVYPDLSPARTIVDLLRFYLRRALLYRGTSKISGGVGWEQSVGVSDSPASTNPLLAEDREGAGFLVRTVPVQVSRIKELRQRLQAAAGVDDNGVAIEGHRPADALLLLSGSHPGRRLPLMRHFLPDANDELRLATTMRDSGHLPKRLAFWAVANPMVEAHEAGVDKVRKKVELGAEVILTQPPLVWEPFERWLRGVHASGALTRGAMAGYEGEARAGEHATATATASTTSRAAFERRRPSRTPTAVGREGGAAILVGMPVITSPKGLRFWLELCGV 846
F AE+YPDL A T DLLR R + G +G VG PA A+ + VRTV Q+ +LR + +AAGVD +G G ADALL +SGSHP R LP +L + D L LA+ MR+ G+LP L+ WAV NPM+ V ++ KK+E GAEVI+TQPPL+W W FE+ R V +++G+P++ S L FWL LCGV
Sbjct: 94 FRAEIYPDLPLATTWRDLLR----RTVQTAGRDSEAGWVG----------PA------AQACPAERWTVRTVAAQLRSRDQLRAMMLSAAGVDASGDPKPGGSSADALLFVSGSHPARHLPGATKWLQSSFDLLLLASAMREEGYLPPSLSLWAVENPMLSP----VSRLDKKIENGAEVIITQPPLLWNRTALW-----------------------------------------FEQADKQRLSQNV------KVVLGLPIVPSVGNLEFWLRLCGV 301
BLAST of mRNA_P-fluviatile_contig14.2280.1 vs. uniprot
Match: A0A383W723_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W723_TETOB) HSP 1 Score: 124 bits (312), Expect = 2.000e-28 Identity = 98/298 (32.89%), Postives = 141/298 (47.32%), Query Frame = 1
Query: 1 SGVFAAEVYPDLSPARTIVDLLRFYLRRALLYRGTSKISGGVGWEQSVGVSDSPASTNPLLAE--------DREGAGFL--VRTVPVQVSRIKELRQRLQAAAGVDDNGVAIEG--HRP-ADALLLLSGSHPGRRLPLMRHFLPDANDELRLATTMRDSGHLPKRLAFWAVANPMVEAHEAGVDKVRKKVELGAEVILTQPPLVWEPFERWLRGVHASGALTRGAMAGYEGEARAGEHATATATASTTSRAAFERRRPSRTPTAVGREGGAAILVGMPVITSPKGLRFWLELCGVGDN 855
+G F AEV+PDL A T L Y + + +GT++ + + S A+ ++A+ D +G + V TV Q+S + ++ + AAGV +GV E HRP ADALLL+SGSHP R LPL++ FLP + LR A+ ++ G LP++L WAVANP++E + ++ KV GA+VILTQPPL W FE W+ RRR + A +LVG P+++S + FW LCG G N
Sbjct: 68 TGAFGAEVHPDLPIATTWHGL---YKQISSRLQGTARRDALA----AAAKAQSKAAAVQMMADIASCEEAMDSQGLKPVLHVATVGAQLSSMADISDAMCTAAGVTPSGVRREASEHRPHADALLLVSGSHPVRTLPLLQQFLPGSVAMLRQASQLKQRGVLPQQLQLWAVANPVMEPDASYTEQ---KVAAGAQVILTQPPLDWARFEAWMEDA---------------------------------------RRRQLHS--------AARLLVGFPLLSSAANVTFWGALCGAGGN 308
BLAST of mRNA_P-fluviatile_contig14.2280.1 vs. uniprot
Match: A0A1D2A210_AUXPR (Uncharacterized protein n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2A210_AUXPR) HSP 1 Score: 122 bits (306), Expect = 7.050e-28 Identity = 94/290 (32.41%), Postives = 121/290 (41.72%), Query Frame = 1
Query: 1 SGVFAAEVYPDLSPARTIVDLLRFYLRRALLYRGTSKISGGVGWEQSVGVSDSPASTNPL-------LAEDREGAGFLVRTVPVQVSRIKELRQRLQAAAGVDDNGVAIEGHRPADALLLLSGSHPGRRLPLMRHFLPDANDELRLATTMRDSGHLPKRLAFWAVANPMVEAHEAGVDKVRKKVELGAEVILTQPPLVWEPFERWLRGVHASGALTRGAMAGYEGEARAGEHATATATASTTSRAAFERRRPSRTPTAVGREGGAAILVGMPVITSPKGLRFWLELCGVG 849
SG F A V PDL PA T+ L LR + GG V++SP + P L + VR+V Q+ ++LR+R+ AA EGH PA ALLLLSG HP R LP++ HFL ++ LR A T R G LP WAVANP E + ++ KVE GA +LTQPPL+W W+ +G R A I++G+P+ITS L FWL L G G
Sbjct: 80 SGAFGAGVVPDLPPATTLRQLAAQALR----------LPGGH-------VAESPTTAPPATCRAPAGLTPQQPPGCITVRSVAAQLRSREDLRRRMAAAVA------GSEGHPPAQALLLLSGGHPVRTLPIVPHFLGNSLSMLRDAGTARSRGELPADTRLWAVANPGSET----LRRLAAKVEAGASTVLTQPPLLWRRSREWMERAAENGLTHR-----------------------------------------------ARIVLGVPLITSRSNLEFWLFLIGAG 295
BLAST of mRNA_P-fluviatile_contig14.2280.1 vs. uniprot
Match: A0A061R353_9CHLO (Methylenetetrahydrofolate reductase (NAD(P)H) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R353_9CHLO) HSP 1 Score: 117 bits (293), Expect = 6.220e-27 Identity = 81/248 (32.66%), Postives = 118/248 (47.58%), Query Frame = 1
Query: 118 GGVGWEQSVGVSDSPASTNPLLAEDREGAGFLVRTVPVQVSRIKELRQR-LQAAAGVDDNGVAIEGHRPADALLLLSGSHPGRRLPLMRHFLPDANDELRLATTMRDSGHLPKRLAFWAVANPMVEAHEAGVDKVRKKVELGAEVILTQPPLVWEPFERWLRGVHASGALTRGAMAGYEGEARAGEHATATATASTTSRAAFERRRPSRTPTAVGREGGAAILVGMPVITSPKGLRFWLELCGVGDNP 858
GG+G + AS P A++ + +LVRTV VQ +EL + L+ A G DD G A+ALL +SGSHP R+L +M LP + D L +A M+ G+LP L WAV NP++E ++A ++R+K+E GAEV++TQPPL W+ F+RW G L + ++VG+P+++S L FWL+LCG P
Sbjct: 3 GGIG---------NAASPTPPAADEIRSSRWLVRTVGVQCRSRRELGEHILRQAFGNDDGDADQIG--AANALLCVSGSHPVRQLSIMGRLLPSSLDTLAMAGEMKARGNLPGSLRLWAVENPLLE-YDA--QRLRRKIEAGAEVVVTQPPLDWDSFQRWADDADRLGLLEQ-----------------------------------------------CQLVVGLPMLSSAGNLAFWLQLCGAHSAP 189
BLAST of mRNA_P-fluviatile_contig14.2280.1 vs. uniprot
Match: A0A250WU83_9CHLO (Methylenetetrahydrofolate reductase n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WU83_9CHLO) HSP 1 Score: 119 bits (299), Expect = 2.270e-26 Identity = 116/387 (29.97%), Postives = 153/387 (39.53%), Query Frame = 1
Query: 1 SGVFAAEVYPDLSPARTIVDLLRFYLRRALLYRGTSKISGGVGWEQSVGVSDSPASTNPLLAEDREGAGFL------VRTVPVQVSRIKELRQRL-QAAAGVDDNGVAIEGHRPADALLLLSGSHPGRRLPLMRHFLPDANDELRLATTMRDSGHLPKRLAFWAVANPMVEAHEAGVDKVRKKVELGAEVILTQPPLVWEPFERWLRGVHASGALTRGAMAGYEGEARAGEHATATATASTTSRAAFERRRPSRTPTAVGREGGAAILVGMPVITSPKGLRFWLELCGVGDNPVLCTRAFEAFGGDSTNSGQPQALEEEKESKAGRTASAARAALG---LNPYGEDWFETTLSKLKSLGDSGLGVAGMHVMAPGPGPRRRASELASR 1131
SG F+AEV PDL A T L R S + G +Q D P+S P+LA + A V TV V + + E+ +R+ +A+ + I+ + ALLL+SGSHP R LP + LP + D LR A ++ G +P WAVANP +E + ++K KVE GA ILTQPP FE WL V G +HA ILVGMP I+SP L FWL L G P C + F R A+AA G L+ Y + L++L S GVAG HVM ++ A +L R
Sbjct: 131 SGAFSAEVIPDLPIATTWGALAR---------ASASWFTAGSELKQQSNKKDGPSSHQPVLAVSQLKAELSSVVTSRVNTVAVNLRSMAEVERRMIEASTSSASDQPHIKADSSSAALLLVSGSHPLRTLPGVNRLLPSSVDALRAAKKLKSRGLIPGATQLWAVANPNLERDASLLEK---KVEHGATTILTQPPFDMAAFEAWLTDVERRGLP---------------DHA-------------------------------VNILVGMPFISSPGNLAFWLSLAGCSGRPA-CQQLLAGFQ---------------------RAAAAAAGIAGKPQLHAYCAQYNADLLTQLCSR----TGVAGFHVMPITASSKKMAHQLLIR 433 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2280.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig14.2280.1 >prot_P-fluviatile_contig14.2280.1 ID=prot_P-fluviatile_contig14.2280.1|Name=mRNA_P-fluviatile_contig14.2280.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=381bp SGVFAAEVYPDLSPARTIVDLLRFYLRRALLYRGTSKISGGVGWEQSVGVback to top mRNA from alignment at P-fluviatile_contig14:2435906..2438205+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig14.2280.1 ID=mRNA_P-fluviatile_contig14.2280.1|Name=mRNA_P-fluviatile_contig14.2280.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2300bp|location=Sequence derived from alignment at P-fluviatile_contig14:2435906..2438205+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig14:2435906..2438205+ >mRNA_P-fluviatile_contig14.2280.1 ID=mRNA_P-fluviatile_contig14.2280.1|Name=mRNA_P-fluviatile_contig14.2280.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2286bp|location=Sequence derived from alignment at P-fluviatile_contig14:2435906..2438205+ (Porterinema fluviatile SAG_2381)back to top |