mRNA_P-fluviatile_contig14.2280.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig14.2280.1
Unique NamemRNA_P-fluviatile_contig14.2280.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig14.2280.1 vs. uniprot
Match: D7FNR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNR3_ECTSI)

HSP 1 Score: 381 bits (979), Expect = 8.730e-127
Identity = 226/395 (57.22%), Postives = 261/395 (66.08%), Query Frame = 1
Query:    1 SGVFAAEVYPDLSPARTIVDLLRFYLRRALL----YRGTSKISGGVGWEQSVGVSDSPASTNPLLAEDREGAGFLVRTVPVQVSRIKELRQRLQAAAGVDDNGVAIEGHRPADALLLLSGSHPGRRLPLMRHFLPDANDELRLATTMRDSGHLPKRLAFWAVANPMVEAHEAGVDKVRKKVELGAEVILTQPPLVWEPFERWLRGVHASGALTRGAMAGYEGEARAGEHATATATASTTSRAAFERRRPSRTPTAV--GREGG---AAILVGMPVITSPKGLRFWLELCGVGDNPVLCTRAFEAFGGDS-----TNSGQPQALEEEKESKAGRTASAARAALGLNPYGEDWFETTLSKLKSLGDSGLGVAGMHVMAPGPGPRRRASELASRGVFG 1143
            SGVF AE++PDL PA T+  L R YLRRA       R           E++ G SD+      +  E  EG G+LVRTVPVQ+SR KELR+RL  AAGVD  G  +   RPADALLL+SGSHPGRRLP  + FLPD  DELRLAT+MR+SG LPK LA WAVANP+ EA EAGVD+VRKKVELGAEVILTQPPL WE FERWL+GVHASGAL R A A   G  + GE   AT     TS +  E R  +R P A   GR GG   A ILVG+PVITSPKGLRFWL+LCG+ D P +C + FEAFG  S     T S +P A        AG   + A A    +PYG++W ETT+ KLKSL  SGLGVAG+H+MAPG  PRRRA ELA+ G FG
Sbjct:   68 SGVFDAEIHPDLPPAGTMAGLARCYLRRAKAAVFEMRPDGNSDSSSEGEKAAG-SDTDTVGRCVAKEGNEG-GYLVRTVPVQLSRQKELRRRLAVAAGVDAEGAKVRNVRPADALLLVSGSHPGRRLPFAKSFLPDVYDELRLATSMRNSGRLPKGLALWAVANPLAEADEAGVDRVRKKVELGAEVILTQPPLAWELFERWLQGVHASGALGRSAAARNAGLTKPGEGTDATVKIFETSGSTGEER-STRHPLAAAEGRRGGDPAARILVGLPVITSPKGLRFWLDLCGLHDKPGVCKQVFEAFGQPSSVVARTGSEEPHAH------PAGEKQATAVAGSPPSPYGQEWLETTMLKLKSLDGSGLGVAGVHLMAPGRAPRRRAIELAATGFFG 453          
BLAST of mRNA_P-fluviatile_contig14.2280.1 vs. uniprot
Match: A0A6H5L748_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L748_9PHAE)

HSP 1 Score: 361 bits (927), Expect = 5.880e-119
Identity = 216/393 (54.96%), Postives = 260/393 (66.16%), Query Frame = 1
Query:    1 SGVFAAEVYPDLSPARTIVDLLRFYLRRALLY-------RGTSKISGGVGWEQSVGVSDSPASTNPLLAEDREGAGFLVRTVPVQVSRIKELRQRLQAAAGVDDNGVAIEGHRPADALLLLSGSHPGRRLPLMRHFLPDANDELRLATTMRDSGHLPKRLAFWAVANPMVEAHEAGVDKVRKKVELGAEVILTQPPLVWEPFERWLRGVHASGALTRGAMAGYEGEARAGEHATATATASTTSRAAFERRRPSRTPTAV--GREGG---AAILVGMPVITSPKGLRFWLELCGVGDNPVLCTRAFEAFGGDSTNSGQPQALEEEKESKAGRTASAARAALGLNPYGEDWFETTLSKLKSLGDSGLGVAGMHVMAPGPGPRRRASELASRGVFG 1143
            SGVF AE++PDL PA T+  L+R+YLRRA          R +   S G   E+S G SD+      +  +  EG G+LVRTVPVQ+SR K   +    A GVD  G  +   RPADALLL+SGSHPGRRLP  + FL D  DELRLAT+MR+SGHLPK LA WAVANP+ E  EAG+D+VRKKVELGAEVILTQPPL WE FERWL+GVH SGAL   A A  +G A+ GE   AT      S +  E R  +R PTA   G+ GG   A ILVG+PVIT+PKGLRFWL LCG+ DNP +C +AFEAFG  S+   +    EE     AG   ++A A    +PYG++W ETT+ KLKSL  SGLGVAG+H+MAPG  PRRRA +LA+ G FG
Sbjct:   68 SGVFDAEIHPDLPPAGTMAGLVRYYLRRAKAAVFEMRPDRNSDSSSKG---EKSTG-SDTDTVGRSVARDGIEG-GYLVRTVPVQLSRQKA--RDAACADGVDAEGAKVPNVRPADALLLVSGSHPGRRLPFAKSFLMDVYDELRLATSMRNSGHLPKGLALWAVANPLTEVDEAGIDRVRKKVELGAEVILTQPPLAWELFERWLQGVHTSGALGGSAAARNDGLAKPGEGTDATMKMFEASGSTGEER-STRRPTAAAEGQRGGDSTARILVGLPVITAPKGLRFWLNLCGLHDNPGVCKQAFEAFGHPSSVVART-GTEEPHGHPAGEKQASAVAGSTPSPYGQEWLETTMLKLKSLDGSGLGVAGVHLMAPGRAPRRRAIQLAAAGFFG 451          
BLAST of mRNA_P-fluviatile_contig14.2280.1 vs. uniprot
Match: A0A8J9WJA9_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WJA9_9CHLO)

HSP 1 Score: 135 bits (341), Expect = 6.060e-33
Identity = 96/286 (33.57%), Postives = 128/286 (44.76%), Query Frame = 1
Query:    1 SGVFAAEVYPDLSPARTIVDLLRFYLRRALLYRGTSKISGGVGWEQSVGVSDSPASTNPLLAEDREGA--GFLVRTVPVQVSRIKELRQRLQAAAGVDDNGVAIEGHRPADALLLLSGSHPGRRLPLMRHFLPDANDELRLATTMRDSGHLPKRLAFWAVANPMVEAHEAGVDKVRKKVELGAEVILTQPPLVWEPFERWLRGVHASGALTRGAMAGYEGEARAGEHATATATASTTSRAAFERRRPSRTPTAVGREGGAAILVGMPVITSPKGLRFWLELCGVGD 852
            +G F   VYPDL       D L F   R      T K+                     L  E   G   G LVRT  VQ+   ++LR+RL   AG++++G +  G RPADALLL+SGSHP RR       L D+   L LA ++RD G LP + + WAVANP+V+      D + +KV  GAEVILTQPPL++  FE W  GV   G  ++                                               A I++G+P++TS + + FWLELC   D
Sbjct:   59 TGSFDVGVYPDLPAVMKWSDFLDFKKLRK-----TGKLQ----------------DLEKLRIESAAGGREGLLVRTCGVQLRGHEQLRRRLLLRAGLEEDGRSAAGVRPADALLLVSGSHPLRRALAWSGVLQDSVSALHLAHSLRDQGLLPPQTSLWAVANPLVDTP----DTLERKVAAGAEVILTQPPLIYSKFESWFDGVDRLGVASK-----------------------------------------------AKIVIGIPMLTSSRSMLFWLELCSSAD 272          
BLAST of mRNA_P-fluviatile_contig14.2280.1 vs. uniprot
Match: E1ZJ72_CHLVA (Methylenetetrahydrofolate reductase (NAD(P)H) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZJ72_CHLVA)

HSP 1 Score: 134 bits (338), Expect = 1.200e-32
Identity = 82/195 (42.05%), Postives = 108/195 (55.38%), Query Frame = 1
Query:   10 FAAEVYPDLSPARTIVDLLRFYLRRALLYRGTSKISGGVGWEQSVGVSDSPASTNPLLAEDREGAGFLVRTVPVQVSRIKELRQRLQAAAGVDDNGVAIEGHRPADALLLLSGSHPGRRLPLMRHFLPDANDELRLATTMRDSGHLPKRLAFWAVANPMVEAHEAGVDKVRKKVELGAEVILTQPPLVWEPFERW 594
            F AE+YPDL  A T  DLLR  ++ A             G E  VG  + P    P          + VRTV  Q+    +LR  + +AAGVD  G    G RPADALL +SGSHP R LP    +L D+ D L LA+ MR+ G+LP  L+ WAV NPM+    A V ++R+K + GAEV++TQP L+W+  +RW
Sbjct:   60 FQAEIYPDLPLATTWRDLLRRTVQTA-------------GHESEVGRVEPPPKVCPAER-------WTVRTVAAQLRSRDQLRSMMLSAAGVDPAGDPKPGVRPADALLFVSGSHPARHLPGAGRWLQDSFDLLLLASAMREEGYLPASLSLWAVENPML----APVKRLRQKADAGAEVVVTQPALLWDRVQRW 230          
BLAST of mRNA_P-fluviatile_contig14.2280.1 vs. uniprot
Match: A0A2P6TC01_CHLSO (Ribonuclease Z n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TC01_CHLSO)

HSP 1 Score: 135 bits (339), Expect = 6.930e-31
Identity = 98/283 (34.63%), Postives = 130/283 (45.94%), Query Frame = 1
Query:   10 FAAEVYPDLSPARTIVDLLRFYLRRALLYRGTSKISGGVGWEQSVGVSDSPASTNPLLAEDREGAGFLVRTVPVQVSRIKELRQRLQAAAGVDDNGVAIEGHRPADALLLLSGSHPGRRLPLMRHFLPDANDELRLATTMRDSGHLPKRLAFWAVANPMVEAHEAGVDKVRKKVELGAEVILTQPPLVWEPFERWLRGVHASGALTRGAMAGYEGEARAGEHATATATASTTSRAAFERRRPSRTPTAVGREGGAAILVGMPVITSPKGLRFWLELCGVGDNP 858
            F A+VYPDL  A T  DLLR  +                   Q+ G +  P S +P  A       + VRTV  Q+    +LR  + +AAGV  +G    G   ADALL +SGSHP RRLP    +L  + D L LA+ MR+ G+LP  L+ WAV NPM+      VD++++K ++GAEV+LTQPPL+WE    W     A  A  R          R  EH                                  +++G+PV+ S   L FWL LCGV   P
Sbjct:  854 FGAQVYPDLPLASTWRDLLRRTV-------------------QTAGRAAEPGSVDPPPAAC-PAERWTVRTVAAQLRSRDQLRSMMLSAAGVGPDGEPRPGAARADALLFVSGSHPARRLPGAGRWLQSSFDLLLLASAMREEGYLPPALSLWAVENPMLSP----VDRLQQKADVGAEVVLTQPPLLWERTAAW-----AEEAAAR----------RVSEH--------------------------------IKVVLGLPVVPSVGNLDFWLRLCGVRGQP 1065          
BLAST of mRNA_P-fluviatile_contig14.2280.1 vs. uniprot
Match: A0A2P6VAW2_9CHLO (5,10-methylenetetrahydrofolate reductase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VAW2_9CHLO)

HSP 1 Score: 127 bits (319), Expect = 1.270e-29
Identity = 96/279 (34.41%), Postives = 126/279 (45.16%), Query Frame = 1
Query:   10 FAAEVYPDLSPARTIVDLLRFYLRRALLYRGTSKISGGVGWEQSVGVSDSPASTNPLLAEDREGAGFLVRTVPVQVSRIKELRQRLQAAAGVDDNGVAIEGHRPADALLLLSGSHPGRRLPLMRHFLPDANDELRLATTMRDSGHLPKRLAFWAVANPMVEAHEAGVDKVRKKVELGAEVILTQPPLVWEPFERWLRGVHASGALTRGAMAGYEGEARAGEHATATATASTTSRAAFERRRPSRTPTAVGREGGAAILVGMPVITSPKGLRFWLELCGV 846
            F AE+YPDL  A T  DLLR    R +   G    +G VG          PA      A+      + VRTV  Q+    +LR  + +AAGVD +G    G   ADALL +SGSHP R LP    +L  + D L LA+ MR+ G+LP  L+ WAV NPM+      V ++ KK+E GAEVI+TQPPL+W     W                                         FE+    R    V       +++G+P++ S   L FWL LCGV
Sbjct:   94 FRAEIYPDLPLATTWRDLLR----RTVQTAGRDSEAGWVG----------PA------AQACPAERWTVRTVAAQLRSRDQLRAMMLSAAGVDASGDPKPGGSSADALLFVSGSHPARHLPGATKWLQSSFDLLLLASAMREEGYLPPSLSLWAVENPMLSP----VSRLDKKIENGAEVIITQPPLLWNRTALW-----------------------------------------FEQADKQRLSQNV------KVVLGLPIVPSVGNLEFWLRLCGV 301          
BLAST of mRNA_P-fluviatile_contig14.2280.1 vs. uniprot
Match: A0A383W723_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W723_TETOB)

HSP 1 Score: 124 bits (312), Expect = 2.000e-28
Identity = 98/298 (32.89%), Postives = 141/298 (47.32%), Query Frame = 1
Query:    1 SGVFAAEVYPDLSPARTIVDLLRFYLRRALLYRGTSKISGGVGWEQSVGVSDSPASTNPLLAE--------DREGAGFL--VRTVPVQVSRIKELRQRLQAAAGVDDNGVAIEG--HRP-ADALLLLSGSHPGRRLPLMRHFLPDANDELRLATTMRDSGHLPKRLAFWAVANPMVEAHEAGVDKVRKKVELGAEVILTQPPLVWEPFERWLRGVHASGALTRGAMAGYEGEARAGEHATATATASTTSRAAFERRRPSRTPTAVGREGGAAILVGMPVITSPKGLRFWLELCGVGDN 855
            +G F AEV+PDL  A T   L   Y + +   +GT++         +   + S A+   ++A+        D +G   +  V TV  Q+S + ++   +  AAGV  +GV  E   HRP ADALLL+SGSHP R LPL++ FLP +   LR A+ ++  G LP++L  WAVANP++E   +  ++   KV  GA+VILTQPPL W  FE W+                                          RRR   +         A +LVG P+++S   + FW  LCG G N
Sbjct:   68 TGAFGAEVHPDLPIATTWHGL---YKQISSRLQGTARRDALA----AAAKAQSKAAAVQMMADIASCEEAMDSQGLKPVLHVATVGAQLSSMADISDAMCTAAGVTPSGVRREASEHRPHADALLLVSGSHPVRTLPLLQQFLPGSVAMLRQASQLKQRGVLPQQLQLWAVANPVMEPDASYTEQ---KVAAGAQVILTQPPLDWARFEAWMEDA---------------------------------------RRRQLHS--------AARLLVGFPLLSSAANVTFWGALCGAGGN 308          
BLAST of mRNA_P-fluviatile_contig14.2280.1 vs. uniprot
Match: A0A1D2A210_AUXPR (Uncharacterized protein n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2A210_AUXPR)

HSP 1 Score: 122 bits (306), Expect = 7.050e-28
Identity = 94/290 (32.41%), Postives = 121/290 (41.72%), Query Frame = 1
Query:    1 SGVFAAEVYPDLSPARTIVDLLRFYLRRALLYRGTSKISGGVGWEQSVGVSDSPASTNPL-------LAEDREGAGFLVRTVPVQVSRIKELRQRLQAAAGVDDNGVAIEGHRPADALLLLSGSHPGRRLPLMRHFLPDANDELRLATTMRDSGHLPKRLAFWAVANPMVEAHEAGVDKVRKKVELGAEVILTQPPLVWEPFERWLRGVHASGALTRGAMAGYEGEARAGEHATATATASTTSRAAFERRRPSRTPTAVGREGGAAILVGMPVITSPKGLRFWLELCGVG 849
            SG F A V PDL PA T+  L    LR          + GG        V++SP +  P        L   +      VR+V  Q+   ++LR+R+ AA          EGH PA ALLLLSG HP R LP++ HFL ++   LR A T R  G LP     WAVANP  E     + ++  KVE GA  +LTQPPL+W     W+     +G   R                                               A I++G+P+ITS   L FWL L G G
Sbjct:   80 SGAFGAGVVPDLPPATTLRQLAAQALR----------LPGGH-------VAESPTTAPPATCRAPAGLTPQQPPGCITVRSVAAQLRSREDLRRRMAAAVA------GSEGHPPAQALLLLSGGHPVRTLPIVPHFLGNSLSMLRDAGTARSRGELPADTRLWAVANPGSET----LRRLAAKVEAGASTVLTQPPLLWRRSREWMERAAENGLTHR-----------------------------------------------ARIVLGVPLITSRSNLEFWLFLIGAG 295          
BLAST of mRNA_P-fluviatile_contig14.2280.1 vs. uniprot
Match: A0A061R353_9CHLO (Methylenetetrahydrofolate reductase (NAD(P)H) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R353_9CHLO)

HSP 1 Score: 117 bits (293), Expect = 6.220e-27
Identity = 81/248 (32.66%), Postives = 118/248 (47.58%), Query Frame = 1
Query:  118 GGVGWEQSVGVSDSPASTNPLLAEDREGAGFLVRTVPVQVSRIKELRQR-LQAAAGVDDNGVAIEGHRPADALLLLSGSHPGRRLPLMRHFLPDANDELRLATTMRDSGHLPKRLAFWAVANPMVEAHEAGVDKVRKKVELGAEVILTQPPLVWEPFERWLRGVHASGALTRGAMAGYEGEARAGEHATATATASTTSRAAFERRRPSRTPTAVGREGGAAILVGMPVITSPKGLRFWLELCGVGDNP 858
            GG+G         + AS  P  A++   + +LVRTV VQ    +EL +  L+ A G DD      G   A+ALL +SGSHP R+L +M   LP + D L +A  M+  G+LP  L  WAV NP++E ++A   ++R+K+E GAEV++TQPPL W+ F+RW       G L +                                                 ++VG+P+++S   L FWL+LCG    P
Sbjct:    3 GGIG---------NAASPTPPAADEIRSSRWLVRTVGVQCRSRRELGEHILRQAFGNDDGDADQIG--AANALLCVSGSHPVRQLSIMGRLLPSSLDTLAMAGEMKARGNLPGSLRLWAVENPLLE-YDA--QRLRRKIEAGAEVVVTQPPLDWDSFQRWADDADRLGLLEQ-----------------------------------------------CQLVVGLPMLSSAGNLAFWLQLCGAHSAP 189          
BLAST of mRNA_P-fluviatile_contig14.2280.1 vs. uniprot
Match: A0A250WU83_9CHLO (Methylenetetrahydrofolate reductase n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WU83_9CHLO)

HSP 1 Score: 119 bits (299), Expect = 2.270e-26
Identity = 116/387 (29.97%), Postives = 153/387 (39.53%), Query Frame = 1
Query:    1 SGVFAAEVYPDLSPARTIVDLLRFYLRRALLYRGTSKISGGVGWEQSVGVSDSPASTNPLLAEDREGAGFL------VRTVPVQVSRIKELRQRL-QAAAGVDDNGVAIEGHRPADALLLLSGSHPGRRLPLMRHFLPDANDELRLATTMRDSGHLPKRLAFWAVANPMVEAHEAGVDKVRKKVELGAEVILTQPPLVWEPFERWLRGVHASGALTRGAMAGYEGEARAGEHATATATASTTSRAAFERRRPSRTPTAVGREGGAAILVGMPVITSPKGLRFWLELCGVGDNPVLCTRAFEAFGGDSTNSGQPQALEEEKESKAGRTASAARAALG---LNPYGEDWFETTLSKLKSLGDSGLGVAGMHVMAPGPGPRRRASELASR 1131
            SG F+AEV PDL  A T   L R            S  + G   +Q     D P+S  P+LA  +  A         V TV V +  + E+ +R+ +A+     +   I+    + ALLL+SGSHP R LP +   LP + D LR A  ++  G +P     WAVANP +E   + ++K   KVE GA  ILTQPP     FE WL  V   G                 +HA                                 ILVGMP I+SP  L FWL L G    P  C +    F                      R A+AA    G   L+ Y   +    L++L S      GVAG HVM      ++ A +L  R
Sbjct:  131 SGAFSAEVIPDLPIATTWGALAR---------ASASWFTAGSELKQQSNKKDGPSSHQPVLAVSQLKAELSSVVTSRVNTVAVNLRSMAEVERRMIEASTSSASDQPHIKADSSSAALLLVSGSHPLRTLPGVNRLLPSSVDALRAAKKLKSRGLIPGATQLWAVANPNLERDASLLEK---KVEHGATTILTQPPFDMAAFEAWLTDVERRGLP---------------DHA-------------------------------VNILVGMPFISSPGNLAFWLSLAGCSGRPA-CQQLLAGFQ---------------------RAAAAAAGIAGKPQLHAYCAQYNADLLTQLCSR----TGVAGFHVMPITASSKKMAHQLLIR 433          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2280.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D7FNR3_ECTSI8.730e-12757.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L748_9PHAE5.880e-11954.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8J9WJA9_9CHLO6.060e-3333.57Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi ... [more]
E1ZJ72_CHLVA1.200e-3242.05Methylenetetrahydrofolate reductase (NAD(P)H) n=1 ... [more]
A0A2P6TC01_CHLSO6.930e-3134.63Ribonuclease Z n=1 Tax=Chlorella sorokiniana TaxID... [more]
A0A2P6VAW2_9CHLO1.270e-2934.415,10-methylenetetrahydrofolate reductase n=1 Tax=M... [more]
A0A383W723_TETOB2.000e-2832.89Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]
A0A1D2A210_AUXPR7.050e-2832.41Uncharacterized protein n=3 Tax=Auxenochlorella pr... [more]
A0A061R353_9CHLO6.220e-2732.66Methylenetetrahydrofolate reductase (NAD(P)H) n=1 ... [more]
A0A250WU83_9CHLO2.270e-2629.97Methylenetetrahydrofolate reductase n=1 Tax=Chlamy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig14contigP-fluviatile_contig14:2435906..2438205 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score136.3
Seed ortholog evalue2.9e-29
Seed eggNOG ortholog554065.XP_005846552.1
EggNOG OGs2E0ZU@1,2S8CR@2759,34N70@3041,37XFJ@33090
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons6
Model size1143
Cds size1143
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig14.2280.1prot_P-fluviatile_contig14.2280.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig14 2435906..2438205 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815629.3909328-CDS-P-fluviatile_contig14:2435905..24361541622815629.3909328-CDS-P-fluviatile_contig14:2435905..2436154Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2435906..2436154 +
1693562556.127278-CDS-P-fluviatile_contig14:2435905..24361541693562556.127278-CDS-P-fluviatile_contig14:2435905..2436154Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2435906..2436154 +
1622815629.4039702-CDS-P-fluviatile_contig14:2436414..24365041622815629.4039702-CDS-P-fluviatile_contig14:2436414..2436504Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2436415..2436504 +
1693562556.138121-CDS-P-fluviatile_contig14:2436414..24365041693562556.138121-CDS-P-fluviatile_contig14:2436414..2436504Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2436415..2436504 +
1622815629.41521-CDS-P-fluviatile_contig14:2436738..24368361622815629.41521-CDS-P-fluviatile_contig14:2436738..2436836Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2436739..2436836 +
1693562556.1460688-CDS-P-fluviatile_contig14:2436738..24368361693562556.1460688-CDS-P-fluviatile_contig14:2436738..2436836Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2436739..2436836 +
1622815629.425041-CDS-P-fluviatile_contig14:2437149..24373021622815629.425041-CDS-P-fluviatile_contig14:2437149..2437302Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2437150..2437302 +
1693562556.1541417-CDS-P-fluviatile_contig14:2437149..24373021693562556.1541417-CDS-P-fluviatile_contig14:2437149..2437302Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2437150..2437302 +
1622815629.4385843-CDS-P-fluviatile_contig14:2437598..24380011622815629.4385843-CDS-P-fluviatile_contig14:2437598..2438001Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2437599..2438001 +
1693562556.1694956-CDS-P-fluviatile_contig14:2437598..24380011693562556.1694956-CDS-P-fluviatile_contig14:2437598..2438001Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2437599..2438001 +
1622815629.4515548-CDS-P-fluviatile_contig14:2438055..24382051622815629.4515548-CDS-P-fluviatile_contig14:2438055..2438205Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2438056..2438205 +
1693562556.1807206-CDS-P-fluviatile_contig14:2438055..24382051693562556.1807206-CDS-P-fluviatile_contig14:2438055..2438205Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2438056..2438205 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig14.2280.1

>prot_P-fluviatile_contig14.2280.1 ID=prot_P-fluviatile_contig14.2280.1|Name=mRNA_P-fluviatile_contig14.2280.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=381bp
SGVFAAEVYPDLSPARTIVDLLRFYLRRALLYRGTSKISGGVGWEQSVGV
SDSPASTNPLLAEDREGAGFLVRTVPVQVSRIKELRQRLQAAAGVDDNGV
AIEGHRPADALLLLSGSHPGRRLPLMRHFLPDANDELRLATTMRDSGHLP
KRLAFWAVANPMVEAHEAGVDKVRKKVELGAEVILTQPPLVWEPFERWLR
GVHASGALTRGAMAGYEGEARAGEHATATATASTTSRAAFERRRPSRTPT
AVGREGGAAILVGMPVITSPKGLRFWLELCGVGDNPVLCTRAFEAFGGDS
TNSGQPQALEEEKESKAGRTASAARAALGLNPYGEDWFETTLSKLKSLGD
SGLGVAGMHVMAPGPGPRRRASELASRGVFG
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mRNA from alignment at P-fluviatile_contig14:2435906..2438205+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig14.2280.1 ID=mRNA_P-fluviatile_contig14.2280.1|Name=mRNA_P-fluviatile_contig14.2280.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2300bp|location=Sequence derived from alignment at P-fluviatile_contig14:2435906..2438205+ (Porterinema fluviatile SAG_2381)
AGTGGCGTGTTCGCTGCCGAAGTTTATCCGGACCTTTCCCCGGCACGGAC GATAGTTGATCTTCTCCGCTTCTACCTACGAAGAGCTCTTCTCTATCGCG GCACGAGCAAGATCTCAGGAGGGGTCGGATGGGAGCAAAGCGTCGGGGTT TCAGACTCACCGGCCAGTACGAACCCTCTTCTTGCTGAGGATAGAGAAGG AGCCGGCTTTCTCGTCCGCACCGTCCCTGTGCAAGTCTCGCGAATAAAGG TAGAACTCAGTAGAGATTTGGGATATGCACGTGAAACGAATCACCGCGTC GTTTTGCTACGTCGCTCAAGAGCTGCCAGTCACAAACGCGAGATTGCATG CTGCATGCACTATTTTGGGACAAATTTCGAAGCGTGTTTTCGAGACTACA AAAGGTGAAGTACGTGCCTGATTCACAAGGAGTTAAACTTGTCCACACAC CATACCCGGTCTCCCATACCCAATCGCCCGCTCCATTCCGTTCATCACGG AACACTCAGGAACTTCGGCAACGCCTGCAGGCAGCGGCCGGGGTTGATGA CAATGGGGTTGCAATCGAGGGCCATCGACCCGCCGACGCACTACTGTTGG TAAGGGCAGTCGCTTTTCGTCCTCATATGAAGGACACCAGCAGGAACGGG CTTGCATCTGAAATGTCAGCACGGGATTGTCGAGCTCGTCGTGTTCAGAA ACGACCGTGCATCGGCGGTCGTGTCAATATATTGGAATTTCTTCCCAGCA CAGCCATGTTTTACCTTGTCTGAAGGTTGTAAACGAAGCAGTTCTGTTTC CTGTGCACTGTTTCTTTTCTTTGTTTTATCAAGTTGTCAGGCAGTCACCC CGGGCGACGCCTACCGTTGATGAGGCATTTTCTCCCAGACGCAAACGACG AGCTGCGCCTGGCCACGACCATGCGAGACAGGTAGGGTCTACCTTTTGTC GTGGTCGGGGTGGTACTACTGCTGGCCTGATCAAATCGCTCCGCATACCC CATCGAGCTGTGTACTGACAGAGCGGCACGCCTTTGCTCCCAGCAAGCGA CATCAGGGATGTCTTGTTCATCGGCCGACCTACGGGCTGTTTCCAGAAAA AAATATGTCAGGGGTTAGGGTTAGGGTTATAGGGTTAAGCGTGCCACGTT TCCCATAACCTCTGTGGCAGAAAATGAGGGCTTCAGTTGTGACCGACCTC TGGGATACCCCGCCCCGCCACCTTATCCCCTGCCCCTCTTCCAGCGGTCA CCTCCCGAAGCGGTTGGCTTTCTGGGCAGTGGCAAACCCAATGGTCGAAG CACACGAGGCGGGCGTGGACAAGGTCCGGAAAAAAGTGGAGCTCGGGGCA GAAGTCATTCTCACGCAGCCTCCGCTGGTGTGGGAACCGTTCGAGCGGTG AGAGCGCACCAGTCGCAAGCGTCGAGAGGCGTACGAATCGTTTCGCATTG GGGGTTCCGCTTGAGTCAAGAGGCTGTGGCGCGCACGTAGTGGGTTCGTG GAGTTTCCGAGGTCTCAGTCGATTACGTCGATGAGTCGGCACCATCATGA TCACCGTTTTCTCCGGCCGAATCGCGCATCCGTTAAACTCTGCGGCCATG TCTGCTTCGGCAGCAACGTAGCTGTACGAGGTGCAGGGGAGAGCTCACGT GTCAACGGCACGACGACGTTTTTTTTCTGCACACTTGCGTCAGGTGGCTG CGAGGTGTCCACGCCAGCGGAGCTTTGACTCGAGGCGCCATGGCAGGGTA CGAAGGAGAGGCGAGGGCGGGGGAACACGCGACGGCGACAGCGACGGCGT CAACAACGTCGCGAGCGGCATTCGAACGACGACGCCCGTCTCGCACTCCT ACGGCGGTTGGACGGGAAGGAGGAGCCGCTATCCTGGTTGGAATGCCGGT GATCACCTCACCGAAGGGGCTCCGCTTTTGGCTCGAGCTGTGCGGGGTGG GCGACAATCCGGTTCTCTGCACGAGGGCGTTCGAGGCCTTCGGAGGCGAC TCGACAAACTCGGGCCAACCACAAGCCCTGGAGGAGGAAAAGGAGAGTAA AGCAGGCAGAACTGCTTCAGCCGCACGTGCGGCGTTGGGGTTAAATGTAG GCAAATCGACATCGGCTGCGAGCAGCGGGAAGATGGTGGGGTCGTCGCAG CCGTACGGAGAGGATTGGTTCGAGACCACCCTGTCCAAGCTGAAGAGTCT CGGCGACAGCGGCTTGGGCGTGGCGGGGATGCATGTTATGGCTCCTGGAC CGGGCCCGAGACGAAGAGCAAGCGAGCTTGCGAGCAGGGGTGTCTTCGGG
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Coding sequence (CDS) from alignment at P-fluviatile_contig14:2435906..2438205+

>mRNA_P-fluviatile_contig14.2280.1 ID=mRNA_P-fluviatile_contig14.2280.1|Name=mRNA_P-fluviatile_contig14.2280.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2286bp|location=Sequence derived from alignment at P-fluviatile_contig14:2435906..2438205+ (Porterinema fluviatile SAG_2381)
AGTGGCGTGTTCGCTGCCGAAGTTTATCCGGACCTTTCCCCGGCACGGAC
GATAGTTGATCTTCTCCGCTTCTACCTACGAAGAGCTCTTCTCTATCGCG
GCACGAGCAAGATCTCAGGAGGGGTCGGATGGGAGCAAAGCGTCGGGGTT
TCAGACTCACCGGCCAGTACGAACCCTCTTCTTGCTGAGGATAGAGAAGG
AGCCGGCTTTCTCGTCCGCACCGTCCCTGTGCAAGTCTCGCGAATAAAGA
GTGGCGTGTTCGCTGCCGAAGTTTATCCGGACCTTTCCCCGGCACGGACG
ATAGTTGATCTTCTCCGCTTCTACCTACGAAGAGCTCTTCTCTATCGCGG
CACGAGCAAGATCTCAGGAGGGGTCGGATGGGAGCAAAGCGTCGGGGTTT
CAGACTCACCGGCCAGTACGAACCCTCTTCTTGCTGAGGATAGAGAAGGA
GCCGGCTTTCTCGTCCGCACCGTCCCTGTGCAAGTCTCGCGAATAAAGGA
ACTTCGGCAACGCCTGCAGGCAGCGGCCGGGGTTGATGACAATGGGGTTG
CAATCGAGGGCCATCGACCCGCCGACGCACTACTGTTGGAACTTCGGCAA
CGCCTGCAGGCAGCGGCCGGGGTTGATGACAATGGGGTTGCAATCGAGGG
CCATCGACCCGCCGACGCACTACTGTTGTTGTCAGGCAGTCACCCCGGGC
GACGCCTACCGTTGATGAGGCATTTTCTCCCAGACGCAAACGACGAGCTG
CGCCTGGCCACGACCATGCGAGACAGTTGTCAGGCAGTCACCCCGGGCGA
CGCCTACCGTTGATGAGGCATTTTCTCCCAGACGCAAACGACGAGCTGCG
CCTGGCCACGACCATGCGAGACAGCGGTCACCTCCCGAAGCGGTTGGCTT
TCTGGGCAGTGGCAAACCCAATGGTCGAAGCACACGAGGCGGGCGTGGAC
AAGGTCCGGAAAAAAGTGGAGCTCGGGGCAGAAGTCATTCTCACGCAGCC
TCCGCTGGTGTGGGAACCGTTCGAGCGCGGTCACCTCCCGAAGCGGTTGG
CTTTCTGGGCAGTGGCAAACCCAATGGTCGAAGCACACGAGGCGGGCGTG
GACAAGGTCCGGAAAAAAGTGGAGCTCGGGGCAGAAGTCATTCTCACGCA
GCCTCCGCTGGTGTGGGAACCGTTCGAGCGGTGGCTGCGAGGTGTCCACG
CCAGCGGAGCTTTGACTCGAGGCGCCATGGCAGGGTACGAAGGAGAGGCG
AGGGCGGGGGAACACGCGACGGCGACAGCGACGGCGTCAACAACGTCGCG
AGCGGCATTCGAACGACGACGCCCGTCTCGCACTCCTACGGCGGTTGGAC
GGGAAGGAGGAGCCGCTATCCTGGTTGGAATGCCGGTGATCACCTCACCG
AAGGGGCTCCGCTTTTGGCTCGAGCTGTGCGGGGTGGGCGACAATCCGGT
TCTCTGCACGAGGGCGTTCGAGGCCTTCGGAGGCGACTCGACAAACTCGG
GCCAACCACAAGCCCTGGAGGAGGAAAAGGAGAGTAAAGCAGGCAGAACT
GCTTCAGCCGCACGTGCGGCGTTGGGGTTAAATGTGGCTGCGAGGTGTCC
ACGCCAGCGGAGCTTTGACTCGAGGCGCCATGGCAGGGTACGAAGGAGAG
GCGAGGGCGGGGGAACACGCGACGGCGACAGCGACGGCGTCAACAACGTC
GCGAGCGGCATTCGAACGACGACGCCCGTCTCGCACTCCTACGGCGGTTG
GACGGGAAGGAGGAGCCGCTATCCTGGTTGGAATGCCGGTGATCACCTCA
CCGAAGGGGCTCCGCTTTTGGCTCGAGCTGTGCGGGGTGGGCGACAATCC
GGTTCTCTGCACGAGGGCGTTCGAGGCCTTCGGAGGCGACTCGACAAACT
CGGGCCAACCACAAGCCCTGGAGGAGGAAAAGGAGAGTAAAGCAGGCAGA
ACTGCTTCAGCCGCACGTGCGGCGTTGGGGTTAAATCCGTACGGAGAGGA
TTGGTTCGAGACCACCCTGTCCAAGCTGAAGAGTCTCGGCGACAGCGGCT
TGGGCGTGGCGGGGATGCATGTTATGGCTCCTGGACCGGGCCCGAGACGA
AGAGCAAGCGAGCTTGCGAGCAGGGGTGTCTTCGGGCCGTACGGAGAGGA
TTGGTTCGAGACCACCCTGTCCAAGCTGAAGAGTCTCGGCGACAGCGGCT
TGGGCGTGGCGGGGATGCATGTTATGGCTCCTGGACCGGGCCCGAGACGA
AGAGCAAGCGAGCTTGCGAGCAGGGGTGTCTTCGGG
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