mRNA_P-fluviatile_contig14.2166.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig14.2166.1 vs. uniprot
Match: A0A6H5JEJ0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ0_9PHAE) HSP 1 Score: 179 bits (454), Expect = 9.080e-51 Identity = 88/106 (83.02%), Postives = 92/106 (86.79%), Query Frame = 1
Query: 4 EGYCADVPAEAFEGSDAPDITMYGTTSLSSFTELVRNVPIDAVVQVQYKYPRTTGGGKVSHIVVVGPGGFQLCTCLKLMRCGLHCNHMLAALVTRLGRAKDFVGES 321
EGYCADVPAEAFEGS PDITMYGTTSL SF ELVRNV I+AVVQVQYKYPRT GKVSHIVVVGP GFQLCTCLKLMRCGL C+H+ AALVTRL RA DF+G S
Sbjct: 437 EGYCADVPAEAFEGSHDPDITMYGTTSLPSFAELVRNVGIEAVVQVQYKYPRTARRGKVSHIVVVGPKGFQLCTCLKLMRCGLPCSHVFAALVTRLDRASDFIGAS 542
BLAST of mRNA_P-fluviatile_contig14.2166.1 vs. uniprot
Match: A0A6H5JJS4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJS4_9PHAE) HSP 1 Score: 179 bits (454), Expect = 4.140e-50 Identity = 88/106 (83.02%), Postives = 92/106 (86.79%), Query Frame = 1
Query: 4 EGYCADVPAEAFEGSDAPDITMYGTTSLSSFTELVRNVPIDAVVQVQYKYPRTTGGGKVSHIVVVGPGGFQLCTCLKLMRCGLHCNHMLAALVTRLGRAKDFVGES 321
EGYCADVPAEAFEGS PDITMYGTTSL SF ELVRNV I+AVVQVQYKYPRT GKVSHIVVVGP GFQLCTCLKLMRCGL C+H+ AALVTRL RA DF+G S
Sbjct: 783 EGYCADVPAEAFEGSHDPDITMYGTTSLPSFAELVRNVGIEAVVQVQYKYPRTARRGKVSHIVVVGPKGFQLCTCLKLMRCGLPCSHVFAALVTRLDRASDFIGAS 888
BLAST of mRNA_P-fluviatile_contig14.2166.1 vs. uniprot
Match: D7FLF6_ECTSI (Putative far-red impaired response protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF6_ECTSI) HSP 1 Score: 122 bits (307), Expect = 2.120e-30 Identity = 61/103 (59.22%), Postives = 74/103 (71.84%), Query Frame = 1
Query: 13 CADVPAEAFEGSDAPDITMYGTTSLSSFTELVRNVPIDAVVQVQYKYPRTTGGGKVSHIVVVGPGGFQLCTCLKLMRCGLHCNHMLAALVTRLGRAKDFVGES 321
C VP E FE +APD TM+GTTSL SF LV V ID +V+V YK+ KV H+V+VGPGGFQLCTCL+L+R GL C H+LAALVTRL R+ +F G+S
Sbjct: 395 CCQVPKEVFEEDEAPDTTMFGTTSLHSFCRLVECVEIDCIVKVLYKHKPDR---KVGHLVIVGPGGFQLCTCLQLLRRGLQCRHVLAALVTRLKRSDEFKGQS 494
BLAST of mRNA_P-fluviatile_contig14.2166.1 vs. uniprot
Match: A0A6H5K454_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K454_9PHAE) HSP 1 Score: 110 bits (276), Expect = 4.390e-26 Identity = 59/105 (56.19%), Postives = 70/105 (66.67%), Query Frame = 1
Query: 13 CADVPAEAFEGSDAPDITMYGTTSLSSFTELVRNVPI---DAVVQVQYKYPRTTGGGKVSHIVVVGPGGFQLCTCLKLMRCGLHCNHMLAALVTRLGRAKDFVGE 318
C VPA+ F+G PD +M+GTT L SF LV +V I DAVV+V YK KV H+VV+GP GFQLC CL+LMR GL C H+LAALVT L RA +F GE
Sbjct: 1220 CCQVPADVFDGKKHPDTSMFGTTCLQSFYRLVAHVDIYMGDAVVKVVYKRR------KVGHLVVIGPDGFQLCACLQLMRRGLQCRHVLAALVTELDRASEFKGE 1318
BLAST of mRNA_P-fluviatile_contig14.2166.1 vs. uniprot
Match: A0A6H5K6K4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K4_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 2.270e-24 Identity = 55/103 (53.40%), Postives = 67/103 (65.05%), Query Frame = 1
Query: 13 CADVPAEAFEGSDAPDITMYGTTSLSSFTELVRNVPIDAVVQVQYKYPRTTGGGKVSHIVVVGPGGFQLCTCLKLMRCGLHCNHMLAALVTRLGRAKDFVGES 321
C +VP EAF+G D P+ T +G L SF LV NV IDA V+V YKY T VSH+VV+GP FQ+CTCL++MR G C H+LAALV R R +F G S
Sbjct: 49 CCEVPREAFDGKDNPE-TKFGAICLQSFFRLVANVKIDAGVKVSYKYRSPT----VSHLVVLGPDRFQMCTCLQVMRRGWQCRHVLAALV-RSNRDSEFAGAS 145
BLAST of mRNA_P-fluviatile_contig14.2166.1 vs. uniprot
Match: A0A6H5KRH9_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRH9_9PHAE) HSP 1 Score: 74.3 bits (181), Expect = 2.880e-13 Identity = 39/89 (43.82%), Postives = 49/89 (55.06%), Query Frame = 1
Query: 40 EGSDAPDITMYGTTSLSSFTELVRNVPIDAVVQVQYKYPRTTGGGKVSHIVVVGPGGFQLCTCLKLMRCGLHCNHMLAALVTRLGRAKD 306
E D T++ TSL + LV VP+ V+YK + G H+VV GPGGF LC+CLKL+R GL C H AALV +G D
Sbjct: 686 EAESTEDNTVWARTSLEALLHLVSRVPVHLSAAVRYKLTPSRPG----HVVVFGPGGFYLCSCLKLLRHGLQCRHYFAALVRFIGGKMD 770
BLAST of mRNA_P-fluviatile_contig14.2166.1 vs. uniprot
Match: A0A6H5L2H3_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2H3_9PHAE) HSP 1 Score: 71.2 bits (173), Expect = 3.360e-12 Identity = 37/85 (43.53%), Postives = 48/85 (56.47%), Query Frame = 1
Query: 40 EGSDAPDITMYGTTSLSSFTELVRNVPIDAVVQVQYKYPRTTGGGKVSHIVVVGPGGFQLCTCLKLMRCGLHCNHMLAALVTRLG 294
E D T++ TSL + +LV VP+ V+YK + G H+VVVGPGGF LC+CLK +R GL C H A LV +G
Sbjct: 260 EAESTEDNTVWARTSLEAPLDLVSRVPVHLAAAVRYKLTPSRPG----HVVVVGPGGFYLCSCLKFLRHGLPCRHYFAVLVRFIG 340
BLAST of mRNA_P-fluviatile_contig14.2166.1 vs. uniprot
Match: A0A6H5JZB4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZB4_9PHAE) HSP 1 Score: 68.2 bits (165), Expect = 4.230e-11 Identity = 36/85 (42.35%), Postives = 45/85 (52.94%), Query Frame = 1
Query: 40 EGSDAPDITMYGTTSLSSFTELVRNVPIDAVVQVQYKYPRTTGGGKVSHIVVVGPGGFQLCTCLKLMRCGLHCNHMLAALVTRLG 294
E D T++ TSL + +L VP+ V YK + G H+VV GPGGF LC+CLKLMR GL C H A L +G
Sbjct: 749 EAESTEDNTVWARTSLEALLDLFSRVPVHLAAAVPYKLTPSRPG----HVVVSGPGGFYLCSCLKLMRHGLPCRHYFAVLFRFVG 829
BLAST of mRNA_P-fluviatile_contig14.2166.1 vs. uniprot
Match: A0A6H5JY17_9PHAE (SWIM-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY17_9PHAE) HSP 1 Score: 67.8 bits (164), Expect = 5.560e-11 Identity = 34/85 (40.00%), Postives = 46/85 (54.12%), Query Frame = 1
Query: 40 EGSDAPDITMYGTTSLSSFTELVRNVPIDAVVQVQYKYPRTTGGGKVSHIVVVGPGGFQLCTCLKLMRCGLHCNHMLAALVTRLG 294
E D +++ TSL + +L+ +P+ V+YK G H+VV GP GF LC+CLKL+R GL C H A LV LG
Sbjct: 303 EAESTEDSSVWARTSLEALLDLIGELPVHVAAAVRYKLTPARPG----HVVVFGPNGFHLCSCLKLLRHGLVCRHYFAVLVRFLG 383
BLAST of mRNA_P-fluviatile_contig14.2166.1 vs. uniprot
Match: A0A6H5JEH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEH9_9PHAE) HSP 1 Score: 62.0 bits (149), Expect = 3.070e-10 Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = 1
Query: 175 KVSHIVVVGPGGFQLCTCLKLMRCGLHCNHMLAALVTRLGRAKDFVG 315
KV H+VV+G GGFQ CTCL+++R C +L ALVT+LGRA DF G
Sbjct: 9 KVDHLVVIGLGGFQRCTCLQVIRRVSQCRQILVALVTKLGRASDFKG 55 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2166.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig14.2166.1 >prot_P-fluviatile_contig14.2166.1 ID=prot_P-fluviatile_contig14.2166.1|Name=mRNA_P-fluviatile_contig14.2166.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=107bp KEGYCADVPAEAFEGSDAPDITMYGTTSLSSFTELVRNVPIDAVVQVQYKback to top mRNA from alignment at P-fluviatile_contig14:1432680..1433000+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig14.2166.1 ID=mRNA_P-fluviatile_contig14.2166.1|Name=mRNA_P-fluviatile_contig14.2166.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=321bp|location=Sequence derived from alignment at P-fluviatile_contig14:1432680..1433000+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig14:1432680..1433000+ >mRNA_P-fluviatile_contig14.2166.1 ID=mRNA_P-fluviatile_contig14.2166.1|Name=mRNA_P-fluviatile_contig14.2166.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=642bp|location=Sequence derived from alignment at P-fluviatile_contig14:1432680..1433000+ (Porterinema fluviatile SAG_2381)back to top |