prot_P-fluviatile_contig14.2133.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig14.2133.1
Unique Name	prot_P-fluviatile_contig14.2133.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	505

Homology

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BLAST of mRNA_P-fluviatile_contig14.2133.1 vs. uniprot
Match: D7FQD3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQD3_ECTSI)

HSP 1 Score: 444 bits (1143), Expect = 5.710e-149
Identity = 344/512 (67.19%), Postives = 386/512 (75.39%), Query Frame = 0

Query:    1 MAAATGPLRTSGTRVVYWALRASHPLPLRIAGNPSHHRCFK-SEPW--------RSRAPAGPTSSPPTTDATPA-EAAEQGLRIIRERSEHLEQGDAVEALRLLLHAASVDSTGRDVFFALGELHYNWGHLLEFGKKAELGAEGAAKAVVAEIKELRKQAMRQRRLAPASGGSK--AAREATR--KREGGTGTGGEGAALGGASGDDASAGDGMEAFLVEVDHPEAWEWYLKAATCGDTRAMMRLGDIAMESAAKTAINMQHAEEWFRKAAEGEPPQPNALFQIARIHHEGIGVPCDPARSRKLYEEAREAGSLPAAYFLGHAFHFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFHGDDGFARDPRAAFRCYASAADDGGHADASYCLGVMNYAMGDMQEAFRRYQTAAEGGNMLAWRNLASMYALGEGVERSEQMAKNILQTFGERIRQQEKEENGETEEGDE 498
            MAA  G LR S  R ++WAL A  P       NP+    F  S+P         R  +   P S    TD   A EAAEQGLRI+RERSE LEQ DAVEA RLLL AA  ++   DV+FALG LHY WG LLEFGK+AELGAEGAAKAVVAEIK+LRKQAM++R+LAP S GSK  A +  T+  +    +  G +G  L   S     AG G      EVD+PEAWEWYLKAA  GDTRAMM+LGDIA+E+  K+A N QHAEEW+RKAA G PPQP+A FQ+ARIHHEGIG PCDP R+R+LY+EA +AGS  AAYFLG  FH G   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   FFHG+DGFARDPRAAFRCY+SAADDG HADASYCLGVM YAMGD +EAFRRYQTAAE GN+LAWRNLA+MYALGEGV RSEQMAKNIL TFG+ I ++EKEE    ++G+E
Sbjct:    1 MAAVVGRLRVSCGRGLWWALHARRPP------NPAPSYIFTTSQPGCLHAGHFSRLSSVTRPPSEHEHTDPAAAREAAEQGLRILRERSESLEQDDAVEAWRLLLKAACAETVPPDVYFALGNLHYIWGELLEFGKRAELGAEGAAKAVVAEIKDLRKQAMKKRQLAPGSFGSKGRAGKSPTKTTRMSDVSARGNDGRVL---SVGAREAGGGRGTTPPEVDYPEAWEWYLKAALSGDTRAMMQLGDIALEAKTKSAGNAQHAEEWYRKAAVGNPPQPDACFQMARIHHEGIGAPCDPTRARELYDEALQAGSSAAAYFLGQRFHVGDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSAFFHGEDGFARDPRAAFRCYSSAADDG-HADASYCLGVMQYAMGDAEEAFRRYQTAAEAGNVLAWRNLAAMYALGEGVARSEQMAKNILATFGDEIERREKEEKRAAKDGEE 502

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BLAST of mRNA_P-fluviatile_contig14.2133.1 vs. uniprot
Match: A0A835YR63_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR63_9STRA)

HSP 1 Score: 103 bits (258), Expect = 3.350e-21
Identity = 101/277 (36.46%), Postives = 132/277 (47.65%), Query Frame = 0

Query:  234 IAMESAAKTAINMQHAEEWFRKAAEGEPPQPNALFQIARIHHEGIGVPC-DPARSRKLYEEAREAGSLPAAYFLGHAFHFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFH-GDDGFARDPRAAFRCYASAADDGG----------------HADASYCLGVMNY----AMGDMQEAFRRYQTAAEGGNMLAWRNLASMYALGEGVERSEQMAKNILQTFGERIRQQEKE 488
            +AM+   ++A N   AE W+ +AA G PP P+ALFQ+AR++HEG+G    DP R+ +LY+ A   GS  A + LGHA   G                             XXXXXXXXXXXXXXXXXXXX                          +  G  G  R    A   +  A                     HA+A+YC  VM Y       D++ AF  YQTAAE G++LAWR +ASM+ LGEGV R E  A++I+Q  G+ I + E+E
Sbjct:    1 MAMQDPGESAANTPFAEHWYLRAAAGAPPLPDALFQLARVYHEGLGPAGEDPVRALELYQRAAAEGSSAALFLLGHAHSVGDAELGLPRDARAALAYLQRSADIDEHPEAXXXXXXXXXXXXXXXXXXXXEGRYVELVARAAAAGSANALFAEGDLWRRGLAGRERSEEKALHWFELAXXXXXXXXXXXXXXXXXXXXXHAEAAYCAAVMRYHGWGCDKDLRAAFELYQTAAEAGHVLAWREVASMHMLGEGVPRCEATARHIMQVMGKAIHKAEQE 277

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BLAST of mRNA_P-fluviatile_contig14.2133.1 vs. uniprot
Match: A0A7R9UGA6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGA6_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 1.630e-6
Identity = 36/121 (29.75%), Postives = 60/121 (49.59%), Query Frame = 0

Query:  208 DHPEAWEWYLKAATCGDTRAMMRLGDIAMESAAKT----AINMQHAEEWFRKAAEGEPPQPNALFQIARIHHEGIG-----------VPCDPARSRKLYEEAREAGSLPAAYFLGHAFHFG 313
            D  +AW W   AA  G T AM+RLG+I +E+ +        N++ AE+W+ +AA    P  +A++ +A+++HEG             +  D  R+R   + A + G   A  ++ HA   G
Sbjct:  122 DFFQAWRWLQIAAFRGHTGAMVRLGNICIENVSDDRSGGTYNVRLAEKWYIRAAAAPSPIADAMYNLAKLYHEGFQAEDGSGEIREILSSDSVRARFWLDRAAQHGDPTACLWMAHAARVG 242

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig14.2133.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig14.2133.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7FQD3_ECTSI	5.710e-149	67.19	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835YR63_9STRA	3.350e-21	36.46	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7R9UGA6_9STRA	1.630e-6	29.75	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 136..156
None	No IPR available	PANTHER	PTHR11102:SF147	SEL1L ERAD E3 LIGASE ADAPTOR SUBUNIT	coord: 121..300
None	No IPR available	PANTHER	PTHR11102	SEL-1-LIKE PROTEIN	coord: 121..300
None	No IPR available	PANTHER	PTHR11102:SF147	SEL1L ERAD E3 LIGASE ADAPTOR SUBUNIT	coord: 211..474
None	No IPR available	PANTHER	PTHR11102	SEL-1-LIKE PROTEIN	coord: 211..474
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 204..345
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 324..476
IPR006597	Sel1-like repeat	SMART	SM00671	sel1	coord: 416..447 e-value: 45.0 score: 8.0 coord: 300..338 e-value: 0.28 score: 20.3 coord: 378..414 e-value: 0.0024 score: 27.1 coord: 264..299 e-value: 1.8E-4 score: 30.9 coord: 339..377 e-value: 10.0 score: 13.6 coord: 448..483 e-value: 39.0 score: 8.5 coord: 225..261 e-value: 15.0 score: 12.1
IPR006597	Sel1-like repeat	PFAM	PF08238	Sel1	coord: 226..258 e-value: 0.035 score: 14.8 coord: 453..471 e-value: 150.0 score: 3.3 coord: 378..413 e-value: 0.026 score: 15.2 coord: 302..338 e-value: 0.025 score: 15.3 coord: 265..299 e-value: 0.12 score: 13.1 coord: 205..224 e-value: 0.18 score: 12.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 184..503 e-value: 5.0E-56 score: 192.0

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig14	contig	P-fluviatile_contig14:1214199..1228215 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig14.2133.1	mRNA_P-fluviatile_contig14.2133.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig14 1214156..1228808 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig14.2133.1 ID=prot_P-fluviatile_contig14.2133.1|Name=mRNA_P-fluviatile_contig14.2133.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=505bp
MAAATGPLRTSGTRVVYWALRASHPLPLRIAGNPSHHRCFKSEPWRSRAP
AGPTSSPPTTDATPAEAAEQGLRIIRERSEHLEQGDAVEALRLLLHAASV
DSTGRDVFFALGELHYNWGHLLEFGKKAELGAEGAAKAVVAEIKELRKQA
MRQRRLAPASGGSKAAREATRKREGGTGTGGEGAALGGASGDDASAGDGM
EAFLVEVDHPEAWEWYLKAATCGDTRAMMRLGDIAMESAAKTAINMQHAE
EWFRKAAEGEPPQPNALFQIARIHHEGIGVPCDPARSRKLYEEAREAGSL
PAAYFLGHAFHFGHEELGIEADGARALHLLRHASKKGHAEATFYLAQAYR
SGSPELGVAQDLRAFGELVQKAAAAGSADALFALGGAFFHGDDGFARDPR
AAFRCYASAADDGGHADASYCLGVMNYAMGDMQEAFRRYQTAAEGGNMLA
WRNLASMYALGEGVERSEQMAKNILQTFGERIRQQEKEENGETEEGDEEN
EEKK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006597	Sel1-like
IPR011990	TPR-like_helical_dom_sf