mRNA_P-fluviatile_contig14.2133.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig14.2133.1 vs. uniprot
Match: D7FQD3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQD3_ECTSI) HSP 1 Score: 446 bits (1146), Expect = 2.030e-146 Identity = 344/512 (67.19%), Postives = 386/512 (75.39%), Query Frame = 2
Query: 44 MAAATGPLRTSGTRVVYWALRASHPLPLRIAGNPSHHRCFK-SEPW--------RSRAPAGPTSSPPTTDATPA-EAAEQGLRIIRERSEHLEQGDAVEALRLLLHAASVDSTGRDVFFALGELHYNWGHLLEFGKKAELGAEGAAKAVVAEIKELRKQAMRQRRLAPASGGSK--AAREATR--KREGGTGTGGEGAALGGASGDDASAGDGMEAFLVEVDHPEAWEWYLKAATCGDTRAMMRLGDIAMESAAKTAINMQHAEEWFRKAAEGEPPQPNALFQIARIHHEGIGVPCDPARSRKLYEEAREAGSLPAAYFLGHAFHFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFHGDDGFARDPRAAFRCYASAADDGGHADASYCLGVMNYAMGDMQEAFRRYQTAAEGGNMLAWRNLASMYALGEGVERSEQMAKNILQTFGERIRQQEKEENGETEEGDE 1537
MAA G LR S R ++WAL A P NP+ F S+P R + P S TD A EAAEQGLRI+RERSE LEQ DAVEA RLLL AA ++ DV+FALG LHY WG LLEFGK+AELGAEGAAKAVVAEIK+LRKQAM++R+LAP S GSK A + T+ + + G +G L S AG G EVD+PEAWEWYLKAA GDTRAMM+LGDIA+E+ K+A N QHAEEW+RKAA G PPQP+A FQ+ARIHHEGIG PCDP R+R+LY+EA +AGS AAYFLG FH G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FFHG+DGFARDPRAAFRCY+SAADDG HADASYCLGVM YAMGD +EAFRRYQTAAE GN+LAWRNLA+MYALGEGV RSEQMAKNIL TFG+ I ++EKEE ++G+E
Sbjct: 1 MAAVVGRLRVSCGRGLWWALHARRPP------NPAPSYIFTTSQPGCLHAGHFSRLSSVTRPPSEHEHTDPAAAREAAEQGLRILRERSESLEQDDAVEAWRLLLKAACAETVPPDVYFALGNLHYIWGELLEFGKRAELGAEGAAKAVVAEIKDLRKQAMKKRQLAPGSFGSKGRAGKSPTKTTRMSDVSARGNDGRVL---SVGAREAGGGRGTTPPEVDYPEAWEWYLKAALSGDTRAMMQLGDIALEAKTKSAGNAQHAEEWYRKAAVGNPPQPDACFQMARIHHEGIGAPCDPTRARELYDEALQAGSSAAAYFLGQRFHVGDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSAFFHGEDGFARDPRAAFRCYSSAADDG-HADASYCLGVMQYAMGDAEEAFRRYQTAAEAGNVLAWRNLAAMYALGEGVARSEQMAKNILATFGDEIERREKEEKRAAKDGEE 502
BLAST of mRNA_P-fluviatile_contig14.2133.1 vs. uniprot
Match: A0A835YR63_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR63_9STRA) HSP 1 Score: 103 bits (258), Expect = 7.300e-21 Identity = 101/277 (36.46%), Postives = 132/277 (47.65%), Query Frame = 2
Query: 743 IAMESAAKTAINMQHAEEWFRKAAEGEPPQPNALFQIARIHHEGIGVPC-DPARSRKLYEEAREAGSLPAAYFLGHAFHFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFH-GDDGFARDPRAAFRCYASAADDGG----------------HADASYCLGVMNY----AMGDMQEAFRRYQTAAEGGNMLAWRNLASMYALGEGVERSEQMAKNILQTFGERIRQQEKE 1507
+AM+ ++A N AE W+ +AA G PP P+ALFQ+AR++HEG+G DP R+ +LY+ A GS A + LGHA G XXXXXXXXXXXXXXXXXXXX + G G R A + A HA+A+YC VM Y D++ AF YQTAAE G++LAWR +ASM+ LGEGV R E A++I+Q G+ I + E+E
Sbjct: 1 MAMQDPGESAANTPFAEHWYLRAAAGAPPLPDALFQLARVYHEGLGPAGEDPVRALELYQRAAAEGSSAALFLLGHAHSVGDAELGLPRDARAALAYLQRSADIDEHPEAXXXXXXXXXXXXXXXXXXXXEGRYVELVARAAAAGSANALFAEGDLWRRGLAGRERSEEKALHWFELAXXXXXXXXXXXXXXXXXXXXXHAEAAYCAAVMRYHGWGCDKDLRAAFELYQTAAEAGHVLAWREVASMHMLGEGVPRCEATARHIMQVMGKAIHKAEQE 277
BLAST of mRNA_P-fluviatile_contig14.2133.1 vs. uniprot
Match: A0A7R9UGA6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGA6_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 2.850e-6 Identity = 36/121 (29.75%), Postives = 60/121 (49.59%), Query Frame = 2
Query: 665 DHPEAWEWYLKAATCGDTRAMMRLGDIAMESAAKT----AINMQHAEEWFRKAAEGEPPQPNALFQIARIHHEGIG-----------VPCDPARSRKLYEEAREAGSLPAAYFLGHAFHFG 982
D +AW W AA G T AM+RLG+I +E+ + N++ AE+W+ +AA P +A++ +A+++HEG + D R+R + A + G A ++ HA G
Sbjct: 122 DFFQAWRWLQIAAFRGHTGAMVRLGNICIENVSDDRSGGTYNVRLAEKWYIRAAAAPSPIADAMYNLAKLYHEGFQAEDGSGEIREILSSDSVRARFWLDRAAQHGDPTACLWMAHAARVG 242 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2133.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig14.2133.1 >prot_P-fluviatile_contig14.2133.1 ID=prot_P-fluviatile_contig14.2133.1|Name=mRNA_P-fluviatile_contig14.2133.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=505bp MAAATGPLRTSGTRVVYWALRASHPLPLRIAGNPSHHRCFKSEPWRSRAPback to top mRNA from alignment at P-fluviatile_contig14:1214156..1228808+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig14.2133.1 ID=mRNA_P-fluviatile_contig14.2133.1|Name=mRNA_P-fluviatile_contig14.2133.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=14653bp|location=Sequence derived from alignment at P-fluviatile_contig14:1214156..1228808+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig14:1214156..1228808+ >mRNA_P-fluviatile_contig14.2133.1 ID=mRNA_P-fluviatile_contig14.2133.1|Name=mRNA_P-fluviatile_contig14.2133.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3030bp|location=Sequence derived from alignment at P-fluviatile_contig14:1214156..1228808+ (Porterinema fluviatile SAG_2381)back to top |