mRNA_P-fluviatile_contig14.2130.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig14.2130.1
Unique NamemRNA_P-fluviatile_contig14.2130.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig14.2130.1 vs. uniprot
Match: D7FQD7_ECTSI (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQD7_ECTSI)

HSP 1 Score: 372 bits (956), Expect = 1.600e-125
Identity = 192/241 (79.67%), Postives = 212/241 (87.97%), Query Frame = 1
Query:    1 CC--QEAMVAGMSSVSAGADADEIALIKTSLLQVAAMTERGQLATEAQQNDMGVLVERLEDLKVDG---GFEDENMVGIWTLVYSSSQAFRSSPFFAAFQALLGTQGVAERVFSFTDTVSNAKIGQARQIINEGCTELLSRVEMSVWPHRWVSGVVETRSKIVNDDVGDRLELIVDDTGVSDSLLGKISPRLEELRLPVDQLSERLFDRIPRITLDTVFLDQDLRISRLPDRNFLIYVKDY 708
            CC  +  +   MSSV   AD DEI LIK SLLQVAAMTERGQLATEAQQNDM +L+ERLE+LK +     ++DENMVG WTLVYSSSQAFRSSPFFA FQAL+G  GVAER+FSFTD   NAKIGQARQI+NE CTELLSRVEMSVWPHRW+SGVVETRSKIVNDD+GD+LE+IVDDT VSDS+LGKISPRLEE+R+PVDQLSERLFDRIPRITLDTVFLDQDLR+SRLPDRNFL+YVKDY
Sbjct:   43 CCDGKHVLTTRMSSVGTPADVDEITLIKNSLLQVAAMTERGQLATEAQQNDMDLLLERLEELKAEELLEPYKDENMVGTWTLVYSSSQAFRSSPFFATFQALIGKDGVAERIFSFTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHRWISGVVETRSKIVNDDIGDQLEVIVDDTRVSDSILGKISPRLEEVRVPVDQLSERLFDRIPRITLDTVFLDQDLRVSRLPDRNFLVYVKDY 283          
BLAST of mRNA_P-fluviatile_contig14.2130.1 vs. uniprot
Match: A0A835ZIJ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIJ0_9STRA)

HSP 1 Score: 147 bits (372), Expect = 6.260e-39
Identity = 81/196 (41.33%), Postives = 123/196 (62.76%), Query Frame = 1
Query:  136 QQNDMGVLVERLEDL-KVDGGFEDENMVGIWTLVYSSSQAFRSSPFFAAFQALLGTQGVAERVFSFTDTVSNAKIGQARQII----NEGCTELLSRVEMSVWPHRWVSGVVETRSKIVNDDVGDRLELIVDDTGVSDSLLGKISP-RLEELRLPVDQLSERLFDRIPRITLDTVFLDQDLRISRLPDRNFLIYVKD 705
            Q++D+ +LV RL++L   +  F  ++M+G WTLVYSS + FR  P FA  QAL G      RV+     +  A++G  +Q I     EG  +    + + V+P  ++ G +ET ++IVNDD+GD LE+IV+ + V++S L +  P +     +PV +LSER FDR+PR+ L+T++LD D R++RLPD   LIYVKD
Sbjct:    2 QRDDVELLVTRLQELVPAEEPFNGDDMLGSWTLVYSSGEVFRGDPVFAHIQALAGNPLWPNRVYRMAGAMPTARVGTVQQTIAAGGEEGRCKRCLVIRLEVFPWNYLQGTIETEARIVNDDIGDGLEVIVERSAVTESPLTRFWPGKNGPPAVPVARLSERFFDRLPRLALETLYLDSDFRVTRLPDDTLLIYVKD 197          
BLAST of mRNA_P-fluviatile_contig14.2130.1 vs. uniprot
Match: A0A7S0WSZ6_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WSZ6_9CHLO)

HSP 1 Score: 101 bits (251), Expect = 6.130e-21
Identity = 80/233 (34.33%), Postives = 128/233 (54.94%), Query Frame = 1
Query:   22 AGMSSVSAGADADEIALIKTSLLQVAAMTERGQLATEAQQNDMGVLVERLEDLKVDGGFE---DENMVGIWTLVYSSSQAFRSSPFFAAFQ-ALLGTQGVAERVFSFTDTVSNAKIGQARQIINEGCTELLSRVEMSVWPHRWVSGVVETRSKIVNDDVGDRLELIVDDTGVSDSLLGKISPRLEELRLPVDQLSERLFDR-IPRITLDTVFLDQDLRISRL-PDRNFLIYVK 702
            A +SSV+  +D      +K  LL+  A  +RGQ+ATE+Q+ ++ +++ +LE  +     +    E + G W LVY+S +AFRSSPFF AFQ  L+G++ +A  +F FTD +  A +GQA Q  +    E +S V++ V+P     G V T S +        L L V++T V+ S L  +   L+ + +PV  + E +  R    ++ D  FLD +LR++R  PD    +Y K
Sbjct:   28 ANVSSVAVDSD------LKKVLLRHVAGIDRGQVATESQKQEIEMVISQLEASQAPMSEQLEVQEALQGKWQLVYTSVEAFRSSPFFWAFQEGLVGSEELASAIFKFTDAIPGATVGQAFQTFDFNTGECVSEVDLEVFPG--AKGCVVTTSTVRCSTPPTCLVLTVENTRVARSNL--LPFLLDSVVVPVKDVVEAVRGRGKTAVSADMTFLDGELRVARTRPDGAIFVYRK 250          
BLAST of mRNA_P-fluviatile_contig14.2130.1 vs. uniprot
Match: B8BQA8_THAPS (PAP_fibrillin domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQA8_THAPS)

HSP 1 Score: 96.7 bits (239), Expect = 6.490e-19
Identity = 80/235 (34.04%), Postives = 124/235 (52.77%), Query Frame = 1
Query:   37 VSAGADADEIAL---IKTSLLQVAAMTERGQLATEAQQNDMGVLVERLEDLKVDGGFEDENMVGIWTLVYSSSQAFRSSPFFAAFQALLG--TQGVAERVFSFTDTVSNA-KIGQARQIINEGCTELLSRVEMSVW-----PHRWVSGVVETRSKIVNDDVGDRLELIVDDTGVSDSLLGKISPRLEE--LRLPVDQLSERLFDRIPRITLDTVFLDQDLRISRLPDRNFLIYVK 702
            VS   D D+  +   +K  LL ++++T RGQ A++ ++N +  LV +LE L         N  G W L YSS+Q+FRSSPFF A ++ +G   + +AE  F   D  + A ++G+ RQI++ G  EL+S  E+SV      P R V G V T S  +     +  EL V  T V  S +      L++  L LPV +  + +   +P   L T ++D+ +RISR  D NF ++ +
Sbjct:   71 VSVDIDEDDAIIRDELKRELLLLSSVTNRGQCASQEEENLVVDLVTQLEALNPTAD-PALNSQGDWELCYSSTQSFRSSPFFLAIRSFMGESNKSMAENAFDIHDRATTASRVGKVRQIVDAGNMELISEYELSVGLLPGLPVR-VKGTVIT-SADMRAIAPETWELTVKATKVKGSNVPFFDQYLDDSGLELPVGEAYKAISGSVPVSVLKTFYVDEGMRISRDVDDNFFVFTR 302          
BLAST of mRNA_P-fluviatile_contig14.2130.1 vs. uniprot
Match: A0A7R9UZ95_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9UZ95_9CHLO)

HSP 1 Score: 92.0 bits (227), Expect = 3.640e-18
Identity = 70/184 (38.04%), Postives = 100/184 (54.35%), Query Frame = 1
Query:  169 LEDLKVDGGFEDENMVGIWTLVYSSSQAFRSSPFFAAFQA--LLGTQGVAERVFSFTDTVSNAKIGQARQIINEGCTELLSRVEMSVWPHRWV---SGVVETRSKIVNDDVGDRLELIVDDTGVSDS-LLGKISPRLEELRLPVDQLSERLFDR-IPRITLDTVFLDQDLRISR-LPDRNFLIY 696
            LE +  + G +   + G W LVYSS +AFRSSPFF AFQ   L G   +A  +F++TD+V  A IG ARQ I+     L+S V+++V P   +   SG V T   I       RL + V DT VS S + G++   L++L +PV  + E L      R  + T +LD  LR+ R LP++   +Y
Sbjct:   13 LERIGREKGVDVAKLNGTWELVYSSVEAFRSSPFFWAFQEGLLAGNVNLASAIFAYTDSVPGATIGSARQTIDTSFGTLVSEVDLTVTPLPGLPGASGAVVTGCDIDASSGDGRLVVTVTDTRVSGSNVAGQL---LDQLSVPVKDIFEALRGSGAARTEVTTTYLDDTLRVMRVLPNKELFVY 193          
BLAST of mRNA_P-fluviatile_contig14.2130.1 vs. uniprot
Match: K0SUV6_THAOC (PAP_fibrillin domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SUV6_THAOC)

HSP 1 Score: 92.4 bits (228), Expect = 3.730e-17
Identity = 80/216 (37.04%), Postives = 116/216 (53.70%), Query Frame = 1
Query:   73 IKTSLLQVAAMTERGQLATEAQQNDMGVLVERLEDLKVDGGFEDENMVGIWTLVYSSSQAFRSSPFFAAFQALLGTQG--VAERVFSFTDTVSNA-KIGQARQIINEGCTELLSRVEMSVW-----PHRWVSGVVETRSKIVNDDVGDRLELIVDDTGVSDSLLGKISPRLEE--LRLPVDQLSERLFDR-IPRITLDTVFLDQDLRISRLPDRNF 687
            +K  L+ +A+ T RGQ AT  +QN +  LV +LE L         N  G W L YSS+Q+FRSSPFF A +A LG     VAE  FS  D  + A ++G+ RQII+   TEL+S  ++SV      P R V G V T + + +    +  E+ V  T V  S +  I   L++  + +PV ++ E +    +P   L T ++D+ +RISR  D NF
Sbjct:   76 LKRELILLASTTNRGQCATLEEQNLVIDLVTQLEALNPTAD-PALNSQGDWELCYSSTQSFRSSPFFLAIRAFLGDDNKEVAENAFSIHDMATTASRVGKVRQIIDSYNTELISEYDLSVGVAPGLPVR-VKGCVVTSADL-SVSAPETWEMKVRGTRVKSSNVPFIDEWLDDSQVEVPVGRVYEAINGGDVPAAILKTYYVDEGMRISRDADENF 288          
BLAST of mRNA_P-fluviatile_contig14.2130.1 vs. uniprot
Match: A0A7S2Q3I4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q3I4_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 3.790e-17
Identity = 74/222 (33.33%), Postives = 118/222 (53.15%), Query Frame = 1
Query:   73 IKTSLLQVAAMTERGQLATEAQQNDMGVLVERLEDLKVDGGFEDENMVGIWTLVYSSSQAFRSSPFFAAFQALLGTQG--VAERVFSFTDTVSNA-KIGQARQIINEGCTELLSRVEMSVW-----PHRWVSGVVETRSK--IVNDDVGDRLELIVDDTGVSDSLLGKISPRLEE--LRLPVDQLSERLFDRIPRITLDTVFLDQDLRISRLPDRNFLIYVK 702
            +K  L+ ++++T RG  AT  + N +  LV +LE L         N  G W L YSS+Q+FRSSPFF A ++ LG     +AE  F   D  + A ++G+ RQII++   EL+S  E+SV      P + V G V T ++  ++  +     EL V  T V  S +  +   L++  L +PV +  + +   +P  TL T ++D+ LRI+R  D NF ++ +
Sbjct:   66 LKRELILLSSVTNRGSCATTEESNLVVDLVTQLEALNPTAD-PAANCQGDWELCYSSTQSFRSSPFFLAIRSFLGDDNKQIAESAFDIHDAATTASRVGKVRQIIDKNNNELVSEYEVSVGLLPGLPVQ-VKGTVITSAEMSVIRPE---SWELEVKGTKVKGSNVPFLDAFLDDSDLEVPVGEAYKAVSGAVPVSTLKTFYVDEGLRITRDVDENFYVFTR 282          
BLAST of mRNA_P-fluviatile_contig14.2130.1 vs. uniprot
Match: A0A1X6P059_PORUM (PAP_fibrillin domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P059_PORUM)

HSP 1 Score: 91.3 bits (225), Expect = 1.000e-16
Identity = 75/217 (34.56%), Postives = 111/217 (51.15%), Query Frame = 1
Query:   73 IKTSLLQVAAMTERGQLATEAQQNDMGVLVERLE-----DLKVDGGFEDENMVGIWTLVYSSSQAFRSSPFFAAFQALLGTQGVAERVFSFTDTVSNAKIGQARQIINEGCTELLSRVEMSVWPHRWVSGVVETRSKIVNDDVGDRLELIVDDTGVSD-SLLGKISPRLEELRLPVDQLSERLFD-RIPRITLDTVFLDQDLRISRLPDRNFLIYVK 702
            +K  LL++AA T+RGQLAT AQ+  +  LV  LE     D  VD    D    G W LVY+S   F+++P   A    L                    +GQ +Q++     EL++ VE++ +P   ++G V T ++ V    G+RLEL+V+ TGV   SL GK+        LPV+QL  +L +  +P   LDT +LD+ +RISR    +  +Y K
Sbjct:  162 MKGKLLEIAAATDRGQLATSAQKEAVEDLVSMLEAANPTDSPVDTALID----GTWLLVYASKPLFKTTPLLLAAATPL------------------LVVGQVKQMLRVDSGELVNDVEVTAFP--MITGTVSTTAR-VTPITGERLELVVEKTGVKGKSLAGKLDLGGLGGSLPVEQLYGKLKNGAVPETFLDTFYLDEKMRISRGKGGSIYVYTK 353          
BLAST of mRNA_P-fluviatile_contig14.2130.1 vs. uniprot
Match: A0A7S2Y236_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y236_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 4.270e-16
Identity = 79/222 (35.59%), Postives = 118/222 (53.15%), Query Frame = 1
Query:   73 IKTSLLQVAAMTERGQLATEAQQNDMGVLVERLEDLKVDGGFEDENMV--GIWTLVYSSSQAFRSSPFFAAFQALLGT--QGVAERVFSFTDTVSNA-KIGQARQIINEGCTELLSRVEMSVW-----PHRWVSGVVETRSKIVNDDVGDRLELIVDDTGVSDSLLGKISPRLEELRL--PVDQLSERLFDRIPRITLDTVFLDQDLRISRLPDRNFLIYVK 702
            +K  LL +++++ RG+ A+   QN +  LV +LE L      ED  M   G W L  SS+Q FRSSPFF   +A +G   + +AE  F   D  + A +IG+ RQ I  G T L S V++ V      P R V G V TR+        +  EL V  T V  S +  ++  L+ L+L  PV+Q+ ER+   +P + L T ++D+ +RI+R  D NF +Y +
Sbjct:   84 LKRELLLLSSVSNRGEFASLDDQNVITDLVAQLEALNPT---EDPAMKCEGEWDLALSSTQFFRSSPFFLTIRAAMGASNKAMAENAFDIHDRATTAGRIGRVRQTI-VGDT-LTSEVDLEVGVFPGLPFR-VKGSVITRASF-RPVSSETAELQVGATEVKGSNIPILNQYLDNLKLELPVNQIFERIQGSVPTVELKTYYIDEGMRITRDMDDNFFVYTR 298          
BLAST of mRNA_P-fluviatile_contig14.2130.1 vs. uniprot
Match: A0A1Z5KQ85_FISSO (PAP_fibrillin domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQ85_FISSO)

HSP 1 Score: 87.8 bits (216), Expect = 4.610e-16
Identity = 69/218 (31.65%), Postives = 117/218 (53.67%), Query Frame = 1
Query:   73 IKTSLLQVAAMTERGQLATEAQQNDMGVLVERLEDLKVDGGFEDENMVGIWTLVYSSSQAFRSSPFFAAFQALLGTQGVAERVFSFTDTVSN-AKIGQARQIINEGCTELLSRVEMSVW----PHRWVSGVVETRS-KIVNDDVGDRLELIVDDTGVSDSLLGKISPRLEELRL--PVDQLSERLFDRIPRITLDTVFLDQDLRISRLPDRNFLIYVK 702
            +K  LL ++++T RG+  ++ +QN +  LV +LE L         N  G W L  SS+Q FRSSPFF + +  +  + +    F   D  S  +++G+ RQ I++    L S V++ V     P R    VV T + K+V+DD+    EL +  T V  S +  ++  LE+ RL  P+  L +RL  ++P + + T ++D+ +RI+R  D NF ++ +
Sbjct:   51 LKRELLLLSSVTNRGEYCSKDEQNILVDLVAQLEALNPTAS-PARNCQGEWDLCLSSTQFFRSSPFFQSLRVAVNDKALINNGFDLHDRASTPSRVGRVRQTIDDN-NLLTSSVDLQVGFPLLPLRVEGTVVTTATMKVVSDDLA---ELQIVKTQVRGSNIPFLNEYLEDPRLDMPMGDLYQRLNGKVPVVPMKTYYVDEGMRIARDIDDNFFVFTR 263          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2130.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQD7_ECTSI1.600e-12579.67PAP_fibrillin domain-containing protein n=2 Tax=Ec... [more]
A0A835ZIJ0_9STRA6.260e-3941.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0WSZ6_9CHLO6.130e-2134.33Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
B8BQA8_THAPS6.490e-1934.04PAP_fibrillin domain-containing protein n=1 Tax=Th... [more]
A0A7R9UZ95_9CHLO3.640e-1838.04Hypothetical protein n=1 Tax=Chlamydomonas euryale... [more]
K0SUV6_THAOC3.730e-1737.04PAP_fibrillin domain-containing protein n=1 Tax=Th... [more]
A0A7S2Q3I4_9STRA3.790e-1733.33Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A1X6P059_PORUM1.000e-1634.56PAP_fibrillin domain-containing protein n=1 Tax=Po... [more]
A0A7S2Y236_9STRA4.270e-1635.59Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A1Z5KQ85_FISSO4.610e-1631.65PAP_fibrillin domain-containing protein n=2 Tax=Fi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig14contigP-fluviatile_contig14:1189305..1192641 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score374.8
Seed ortholog evalue2.9e-101
Seed eggNOG ortholog2880.D7FQD7
EggNOG free text desc.PAP_fibrillin
EggNOG OGs2CY64@1,2S2BE@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPlastid lipid-associated protein/fibrillin conserved domain
Ec32 orthologEc-01_006500.1
Exons5
Model size1204
Cds size696
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815609.7496367-UTR-P-fluviatile_contig14:1189304..11897971622815609.7496367-UTR-P-fluviatile_contig14:1189304..1189797Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 1189305..1189797 -
1693562408.4849727-UTR-P-fluviatile_contig14:1189304..11897971693562408.4849727-UTR-P-fluviatile_contig14:1189304..1189797Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 1189305..1189797 -
1622815609.835385-UTR-P-fluviatile_contig14:1192626..11926411622815609.835385-UTR-P-fluviatile_contig14:1192626..1192641Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 1192627..1192641 -
1693562408.5549736-UTR-P-fluviatile_contig14:1192626..11926411693562408.5549736-UTR-P-fluviatile_contig14:1192626..1192641Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 1192627..1192641 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815609.762899-CDS-P-fluviatile_contig14:1189797..11899091622815609.762899-CDS-P-fluviatile_contig14:1189797..1189909Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1189798..1189909 -
1693562408.4967823-CDS-P-fluviatile_contig14:1189797..11899091693562408.4967823-CDS-P-fluviatile_contig14:1189797..1189909Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1189798..1189909 -
1622815609.775799-CDS-P-fluviatile_contig14:1190366..11905311622815609.775799-CDS-P-fluviatile_contig14:1190366..1190531Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1190367..1190531 -
1693562408.5064628-CDS-P-fluviatile_contig14:1190366..11905311693562408.5064628-CDS-P-fluviatile_contig14:1190366..1190531Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1190367..1190531 -
1622815609.7919762-CDS-P-fluviatile_contig14:1191138..11913591622815609.7919762-CDS-P-fluviatile_contig14:1191138..1191359Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1191139..1191359 -
1693562408.5235531-CDS-P-fluviatile_contig14:1191138..11913591693562408.5235531-CDS-P-fluviatile_contig14:1191138..1191359Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1191139..1191359 -
1622815609.8048208-CDS-P-fluviatile_contig14:1191963..11920831622815609.8048208-CDS-P-fluviatile_contig14:1191963..1192083Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1191964..1192083 -
1693562408.5354958-CDS-P-fluviatile_contig14:1191963..11920831693562408.5354958-CDS-P-fluviatile_contig14:1191963..1192083Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1191964..1192083 -
1622815609.820579-CDS-P-fluviatile_contig14:1192548..11926261622815609.820579-CDS-P-fluviatile_contig14:1192548..1192626Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1192549..1192626 -
1693562408.5456922-CDS-P-fluviatile_contig14:1192548..11926261693562408.5456922-CDS-P-fluviatile_contig14:1192548..1192626Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1192549..1192626 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig14.2130.1prot_P-fluviatile_contig14.2130.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig14 1189798..1192626 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig14.2130.1

>prot_P-fluviatile_contig14.2130.1 ID=prot_P-fluviatile_contig14.2130.1|Name=mRNA_P-fluviatile_contig14.2130.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=232bp
MVAGMSSVSAGADADEIALIKTSLLQVAAMTERGQLATEAQQNDMGVLVE
RLEDLKVDGGFEDENMVGIWTLVYSSSQAFRSSPFFAAFQALLGTQGVAE
RVFSFTDTVSNAKIGQARQIINEGCTELLSRVEMSVWPHRWVSGVVETRS
KIVNDDVGDRLELIVDDTGVSDSLLGKISPRLEELRLPVDQLSERLFDRI
PRITLDTVFLDQDLRISRLPDRNFLIYVKDY*
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mRNA from alignment at P-fluviatile_contig14:1189305..1192641-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig14.2130.1 ID=mRNA_P-fluviatile_contig14.2130.1|Name=mRNA_P-fluviatile_contig14.2130.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3337bp|location=Sequence derived from alignment at P-fluviatile_contig14:1189305..1192641- (Porterinema fluviatile SAG_2381)
TGTTGTCAGGAGGCTATGGTCGCAGGTATGAGCTCGGTGAGCGCAGGTGC CGATGCCGACGAGATTGCCCTCATCAAAACGTCTCTGCTTCAGGTCAGGA AATCAGGAATAAAAAAAACAAGCTTGCATTTACCTACGCTTTTGTGAAGG GTGCACTTGATCGAGAGAGGGTTGGTGTACGTGTGTTGGAATCTCAGCGG TGGTTTGAGCGTGAAGTATTGCTCTATTGTGGTGGGGCATGGATGTAGAA AGTTGCCCTGACGACGGGAAACCAAGCCATGACAATGTGCTACTGCGCGG AGAGAGGACTTTCAGTAGACAGTTGGGGAGTGAAGGCCATTACCGCTGGC GAATGCCGCCGTTTGTCCACGCCTAGGAAATGTCGCCGGACTCTGGAAGG CTTTTAAGATAACCTGAACAATGCGAAGAACACAGTTCTTTCCGAAGATT AATATTGGTTTCAGATGCAAACCGCTTCAGAAGTCAGATCTTGACACGCA CCCATGACCTGTCTGGAATCAAATCTTCGAATATACATGTGTTCATTATT TCATGAAGGTGGCGGCGATGACGGAACGGGGCCAGCTGGCGACCGAGGCA CAACAGAACGACATGGGCGTGTTGGTGGAGCGCCTGGAGGATCTCAAGGT CGACGGAGGCTTCGAGGACGAGAATATGGTAAGATACAGTGCGTTATCAT GTGCGCACTTCGGGAGAGTGTATTGCGAGGTGTAGCGCCCAGTGTCGTTT TTTTTATTTTTCCATGTTGTGGACCGAGGTATACGCGTTTTCATGCGGAC CCCAGGACCTACGCGAAGGATGTTGCGACCCAATTAAATGTCCCGCTCAG AAGATTGTTGGGTTGTTACGCGCAGATAATCCTCGACACTCAGGAATAGG GGAAATACTTCTCAGTTTACACATCGCTTTCGACGAAACCTTCTGCACGT CGTGCTGAAAATGCGCACCGCTGTTTGAGTGTGTGTCGGGTAGTATCAAA TTCACGCAATATCCACACACGTCGGGCATCCCTTAACTTCCCAGCGGACG TGTGACAAATAGAGCTCAGGATATCTTGAATTCTGTTTTTTTTTTCTAAG CACGGCTTCCCCTCGATTTCCTTTTGTTTCACCTCCTGCTTTCGATCCCC TGTCGCGGTTAGAAGCGCCGGGACTCGAAATCGCCACGGCTACAACCACC TTACCAAATGCTTCATTACCAACAACAACCGCAACAACGGTAACAACCAC CACCACGACGACGACGACGACGACAACGACAGGTCGGGATATGGACGCTG GTCTACTCGTCCTCCCAGGCGTTCCGATCCAGCCCGTTCTTCGCGGCCTT CCAGGCTCTGCTCGGCACTCAGGGCGTCGCGGAGAGGGTTTTCTCCTTCA CCGACACCGTCTCGAACGCCAAGATAGGCCAGGCGCGGCAGATCATCAAC GAAGGCTGCACGGAGCTCTTATCCCGGGTAGAGATGTCTGTTTGGCCTCA CAGGTGATGAGACGGCGTGTAGAGTATACGAGGATGGGGGAGGGAGCGCG CGCGTGCCGCATGGGAGGTAAATGTATTTGGCTGGCGCAGGTATTGCGAG CCTTTTGCATTAGGACGGCGAATGTTGCTTTGGCGATGGTTTGAGCTTTT TCGTGTTTTGCCTTTGAAGGTCTTGGTTTGAGAGGTAGCCAGAATGGCTG GACGTGATCTTGTTGGGGGGCCGACCATGTGATGATTGAAACGCAGTCGT AATATTTGCCTTTTGTGTTGGAGGTGTTCCCAGTTACGCCTAAAATTTTG GTTTCACCAAATCGCAAGAACCTTGATTTGTGAGCAATTCCAGTAGAACG GAGGAAAGGGTCTAAGCCCGTTCCGCAGGGCCGTCCTAGGAGTAAGCCTG AGCGATTACAATGCTGTAATCGTGTCAATGCTGACGACCTGCGGGTCAGT GCTTGTGGCGTTCGTATTGGTATTGTCCAGGAGCAGACGCCATCGATACA CCTCCACAAAGTCCAGGAAACAAGAGGACGGGTGAATATTTCTCGCGCGA CCGCTGCCTCTTCATACTCTCGCTCCCTCATCATGCGTTAATTGGGCTAC ACTCGTGCAGGTGGGTATCGGGCGTTGTCGAGACAAGGTCGAAGATCGTG AACGATGATGTCGGCGACCGGTTGGAGCTCATCGTAGATGACACTGGGGT CAGTGACTCCTTGCTGGGCAAAATCAGCCCCAGGCTCGAGGAGTTGCGAC TGCCGGTCGATCAGCTCTCGGAGAGGTGAGTAGTAGACGGGCGCGGGTGG TGCCCGAACTTGCGCCGACAAAGAGGTTTCCTTGCGCATCCGAGAAGCTG CCGAAGCTCTCTGGCTGTGTCTTCACCCACGCAGCACGAAGGATGGCACA GGATGTATTCGTAAGGAGGCTTTCGCACAGCCCGCAACTTGAAGAAAATA CCCTCCAGTTGTTTGCTCTGCAGGTATGGAAGGCAACCGAGAGGGTGATT CCGTCTCCTGCTGACGTGGGAAGCATTTTTTCTGATTTCGCAAGTTTTTC GGGGTTTTTCCCCTCACTGTTGCTTCCTCCGGTTCGAGCAGCACAGGCGA GGTGTCTGCACACATGAAACGACTATTTTGAGTCTAGTTTCTTACTGTGT TTGGTACTGATCGTCGAAGGAGACTGTAGCCCACGCCGTTAATCTGTTTC TCCCCGCACGTCACCACCGCCGCCGCCCCCAGATTGTTCGACCGCATACC ACGGATTACGTTAGACACCGTTTTTCTCGACCAAGACCTGCGCATATCTC GCCTTCCAGACAGAAATTTCCTGATCTACGTGAAGGACTATTGAGTCGAA AGGGAGCGACCGCCGCCTGCGAAACACACGGGGAATGCATGAGGGTTTAG GAGGCTACCAATCGATCTTACACCGGACATATCGAGGGGAGAGCTCTGCT GGAGAATTCTGGAGACTGAAGGAAGCACGGCATGCTTAGCGCTCACTGCA TTAGATGATTGCATGTTGATCCAGCGCTGATTTTACCGGGTGGATGGAAC GCGGGTGCAAGGAATAAGTTTCTGCATACATGTCCATTCGGTGAGGACGT GATTGCGGTAGACACCGTGTACAAAGCTGTGTGTTAGCTGATCGCCTGGC CGAGGTGTGAACAAGAATGCCGTGTTTTAATATACAAGGCATTCGGAGAA TCTTGATGTTATCCCGCCCGTTTAAGTCCAACAGAGGTCTGTTGGCCCTT TCCTTGCCAGCTTCGATAGCAGGCAGCGGTAGAACCATCGTCGAAAACCG ATCGAGTGACCTCGTCCTTTTTTGCCGCGAAATGCAT
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Coding sequence (CDS) from alignment at P-fluviatile_contig14:1189305..1192641-

>mRNA_P-fluviatile_contig14.2130.1 ID=mRNA_P-fluviatile_contig14.2130.1|Name=mRNA_P-fluviatile_contig14.2130.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1392bp|location=Sequence derived from alignment at P-fluviatile_contig14:1189305..1192641- (Porterinema fluviatile SAG_2381)
ATGGTCGCAGGTATGAGCTCGGTGAGCGCAGGTGCCGATGCCGACGAGAT
TGCCCTCATCAAAACGTCTCTGCTTCAGATGGTCGCAGGTATGAGCTCGG
TGAGCGCAGGTGCCGATGCCGACGAGATTGCCCTCATCAAAACGTCTCTG
CTTCAGGTGGCGGCGATGACGGAACGGGGCCAGCTGGCGACCGAGGCACA
ACAGAACGACATGGGCGTGTTGGTGGAGCGCCTGGAGGATCTCAAGGTCG
ACGGAGGCTTCGAGGACGAGAATATGGTGGCGGCGATGACGGAACGGGGC
CAGCTGGCGACCGAGGCACAACAGAACGACATGGGCGTGTTGGTGGAGCG
CCTGGAGGATCTCAAGGTCGACGGAGGCTTCGAGGACGAGAATATGGTCG
GGATATGGACGCTGGTCTACTCGTCCTCCCAGGCGTTCCGATCCAGCCCG
TTCTTCGCGGCCTTCCAGGCTCTGCTCGGCACTCAGGGCGTCGCGGAGAG
GGTTTTCTCCTTCACCGACACCGTCTCGAACGCCAAGATAGGCCAGGCGC
GGCAGATCATCAACGAAGGCTGCACGGAGCTCTTATCCCGGGTAGAGATG
TCTGTTTGGCCTCACAGGTCGGGATATGGACGCTGGTCTACTCGTCCTCC
CAGGCGTTCCGATCCAGCCCGTTCTTCGCGGCCTTCCAGGCTCTGCTCGG
CACTCAGGGCGTCGCGGAGAGGGTTTTCTCCTTCACCGACACCGTCTCGA
ACGCCAAGATAGGCCAGGCGCGGCAGATCATCAACGAAGGCTGCACGGAG
CTCTTATCCCGGGTAGAGATGTCTGTTTGGCCTCACAGGTGGGTATCGGG
CGTTGTCGAGACAAGGTCGAAGATCGTGAACGATGATGTCGGCGACCGGT
TGGAGCTCATCGTAGATGACACTGGGGTCAGTGACTCCTTGCTGGGCAAA
ATCAGCCCCAGGCTCGAGGAGTTGCGACTGCCGGTCGATCAGCTCTCGGA
GAGGTGGGTATCGGGCGTTGTCGAGACAAGGTCGAAGATCGTGAACGATG
ATGTCGGCGACCGGTTGGAGCTCATCGTAGATGACACTGGGGTCAGTGAC
TCCTTGCTGGGCAAAATCAGCCCCAGGCTCGAGGAGTTGCGACTGCCGGT
CGATCAGCTCTCGGAGAGATTGTTCGACCGCATACCACGGATTACGTTAG
ACACCGTTTTTCTCGACCAAGACCTGCGCATATCTCGCCTTCCAGACAGA
AATTTCCTGATCTACGTGAAGGACTATTGAATTGTTCGACCGCATACCAC
GGATTACGTTAGACACCGTTTTTCTCGACCAAGACCTGCGCATATCTCGC
CTTCCAGACAGAAATTTCCTGATCTACGTGAAGGACTATTGA
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