mRNA_P-fluviatile_contig14.2130.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig14.2130.1 vs. uniprot
Match: D7FQD7_ECTSI (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQD7_ECTSI) HSP 1 Score: 372 bits (956), Expect = 1.600e-125 Identity = 192/241 (79.67%), Postives = 212/241 (87.97%), Query Frame = 1
Query: 1 CC--QEAMVAGMSSVSAGADADEIALIKTSLLQVAAMTERGQLATEAQQNDMGVLVERLEDLKVDG---GFEDENMVGIWTLVYSSSQAFRSSPFFAAFQALLGTQGVAERVFSFTDTVSNAKIGQARQIINEGCTELLSRVEMSVWPHRWVSGVVETRSKIVNDDVGDRLELIVDDTGVSDSLLGKISPRLEELRLPVDQLSERLFDRIPRITLDTVFLDQDLRISRLPDRNFLIYVKDY 708
CC + + MSSV AD DEI LIK SLLQVAAMTERGQLATEAQQNDM +L+ERLE+LK + ++DENMVG WTLVYSSSQAFRSSPFFA FQAL+G GVAER+FSFTD NAKIGQARQI+NE CTELLSRVEMSVWPHRW+SGVVETRSKIVNDD+GD+LE+IVDDT VSDS+LGKISPRLEE+R+PVDQLSERLFDRIPRITLDTVFLDQDLR+SRLPDRNFL+YVKDY
Sbjct: 43 CCDGKHVLTTRMSSVGTPADVDEITLIKNSLLQVAAMTERGQLATEAQQNDMDLLLERLEELKAEELLEPYKDENMVGTWTLVYSSSQAFRSSPFFATFQALIGKDGVAERIFSFTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHRWISGVVETRSKIVNDDIGDQLEVIVDDTRVSDSILGKISPRLEEVRVPVDQLSERLFDRIPRITLDTVFLDQDLRVSRLPDRNFLVYVKDY 283
BLAST of mRNA_P-fluviatile_contig14.2130.1 vs. uniprot
Match: A0A835ZIJ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIJ0_9STRA) HSP 1 Score: 147 bits (372), Expect = 6.260e-39 Identity = 81/196 (41.33%), Postives = 123/196 (62.76%), Query Frame = 1
Query: 136 QQNDMGVLVERLEDL-KVDGGFEDENMVGIWTLVYSSSQAFRSSPFFAAFQALLGTQGVAERVFSFTDTVSNAKIGQARQII----NEGCTELLSRVEMSVWPHRWVSGVVETRSKIVNDDVGDRLELIVDDTGVSDSLLGKISP-RLEELRLPVDQLSERLFDRIPRITLDTVFLDQDLRISRLPDRNFLIYVKD 705
Q++D+ +LV RL++L + F ++M+G WTLVYSS + FR P FA QAL G RV+ + A++G +Q I EG + + + V+P ++ G +ET ++IVNDD+GD LE+IV+ + V++S L + P + +PV +LSER FDR+PR+ L+T++LD D R++RLPD LIYVKD
Sbjct: 2 QRDDVELLVTRLQELVPAEEPFNGDDMLGSWTLVYSSGEVFRGDPVFAHIQALAGNPLWPNRVYRMAGAMPTARVGTVQQTIAAGGEEGRCKRCLVIRLEVFPWNYLQGTIETEARIVNDDIGDGLEVIVERSAVTESPLTRFWPGKNGPPAVPVARLSERFFDRLPRLALETLYLDSDFRVTRLPDDTLLIYVKD 197
BLAST of mRNA_P-fluviatile_contig14.2130.1 vs. uniprot
Match: A0A7S0WSZ6_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WSZ6_9CHLO) HSP 1 Score: 101 bits (251), Expect = 6.130e-21 Identity = 80/233 (34.33%), Postives = 128/233 (54.94%), Query Frame = 1
Query: 22 AGMSSVSAGADADEIALIKTSLLQVAAMTERGQLATEAQQNDMGVLVERLEDLKVDGGFE---DENMVGIWTLVYSSSQAFRSSPFFAAFQ-ALLGTQGVAERVFSFTDTVSNAKIGQARQIINEGCTELLSRVEMSVWPHRWVSGVVETRSKIVNDDVGDRLELIVDDTGVSDSLLGKISPRLEELRLPVDQLSERLFDR-IPRITLDTVFLDQDLRISRL-PDRNFLIYVK 702
A +SSV+ +D +K LL+ A +RGQ+ATE+Q+ ++ +++ +LE + + E + G W LVY+S +AFRSSPFF AFQ L+G++ +A +F FTD + A +GQA Q + E +S V++ V+P G V T S + L L V++T V+ S L + L+ + +PV + E + R ++ D FLD +LR++R PD +Y K
Sbjct: 28 ANVSSVAVDSD------LKKVLLRHVAGIDRGQVATESQKQEIEMVISQLEASQAPMSEQLEVQEALQGKWQLVYTSVEAFRSSPFFWAFQEGLVGSEELASAIFKFTDAIPGATVGQAFQTFDFNTGECVSEVDLEVFPG--AKGCVVTTSTVRCSTPPTCLVLTVENTRVARSNL--LPFLLDSVVVPVKDVVEAVRGRGKTAVSADMTFLDGELRVARTRPDGAIFVYRK 250
BLAST of mRNA_P-fluviatile_contig14.2130.1 vs. uniprot
Match: B8BQA8_THAPS (PAP_fibrillin domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQA8_THAPS) HSP 1 Score: 96.7 bits (239), Expect = 6.490e-19 Identity = 80/235 (34.04%), Postives = 124/235 (52.77%), Query Frame = 1
Query: 37 VSAGADADEIAL---IKTSLLQVAAMTERGQLATEAQQNDMGVLVERLEDLKVDGGFEDENMVGIWTLVYSSSQAFRSSPFFAAFQALLG--TQGVAERVFSFTDTVSNA-KIGQARQIINEGCTELLSRVEMSVW-----PHRWVSGVVETRSKIVNDDVGDRLELIVDDTGVSDSLLGKISPRLEE--LRLPVDQLSERLFDRIPRITLDTVFLDQDLRISRLPDRNFLIYVK 702
VS D D+ + +K LL ++++T RGQ A++ ++N + LV +LE L N G W L YSS+Q+FRSSPFF A ++ +G + +AE F D + A ++G+ RQI++ G EL+S E+SV P R V G V T S + + EL V T V S + L++ L LPV + + + +P L T ++D+ +RISR D NF ++ +
Sbjct: 71 VSVDIDEDDAIIRDELKRELLLLSSVTNRGQCASQEEENLVVDLVTQLEALNPTAD-PALNSQGDWELCYSSTQSFRSSPFFLAIRSFMGESNKSMAENAFDIHDRATTASRVGKVRQIVDAGNMELISEYELSVGLLPGLPVR-VKGTVIT-SADMRAIAPETWELTVKATKVKGSNVPFFDQYLDDSGLELPVGEAYKAISGSVPVSVLKTFYVDEGMRISRDVDDNFFVFTR 302
BLAST of mRNA_P-fluviatile_contig14.2130.1 vs. uniprot
Match: A0A7R9UZ95_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9UZ95_9CHLO) HSP 1 Score: 92.0 bits (227), Expect = 3.640e-18 Identity = 70/184 (38.04%), Postives = 100/184 (54.35%), Query Frame = 1
Query: 169 LEDLKVDGGFEDENMVGIWTLVYSSSQAFRSSPFFAAFQA--LLGTQGVAERVFSFTDTVSNAKIGQARQIINEGCTELLSRVEMSVWPHRWV---SGVVETRSKIVNDDVGDRLELIVDDTGVSDS-LLGKISPRLEELRLPVDQLSERLFDR-IPRITLDTVFLDQDLRISR-LPDRNFLIY 696
LE + + G + + G W LVYSS +AFRSSPFF AFQ L G +A +F++TD+V A IG ARQ I+ L+S V+++V P + SG V T I RL + V DT VS S + G++ L++L +PV + E L R + T +LD LR+ R LP++ +Y
Sbjct: 13 LERIGREKGVDVAKLNGTWELVYSSVEAFRSSPFFWAFQEGLLAGNVNLASAIFAYTDSVPGATIGSARQTIDTSFGTLVSEVDLTVTPLPGLPGASGAVVTGCDIDASSGDGRLVVTVTDTRVSGSNVAGQL---LDQLSVPVKDIFEALRGSGAARTEVTTTYLDDTLRVMRVLPNKELFVY 193
BLAST of mRNA_P-fluviatile_contig14.2130.1 vs. uniprot
Match: K0SUV6_THAOC (PAP_fibrillin domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SUV6_THAOC) HSP 1 Score: 92.4 bits (228), Expect = 3.730e-17 Identity = 80/216 (37.04%), Postives = 116/216 (53.70%), Query Frame = 1
Query: 73 IKTSLLQVAAMTERGQLATEAQQNDMGVLVERLEDLKVDGGFEDENMVGIWTLVYSSSQAFRSSPFFAAFQALLGTQG--VAERVFSFTDTVSNA-KIGQARQIINEGCTELLSRVEMSVW-----PHRWVSGVVETRSKIVNDDVGDRLELIVDDTGVSDSLLGKISPRLEE--LRLPVDQLSERLFDR-IPRITLDTVFLDQDLRISRLPDRNF 687
+K L+ +A+ T RGQ AT +QN + LV +LE L N G W L YSS+Q+FRSSPFF A +A LG VAE FS D + A ++G+ RQII+ TEL+S ++SV P R V G V T + + + + E+ V T V S + I L++ + +PV ++ E + +P L T ++D+ +RISR D NF
Sbjct: 76 LKRELILLASTTNRGQCATLEEQNLVIDLVTQLEALNPTAD-PALNSQGDWELCYSSTQSFRSSPFFLAIRAFLGDDNKEVAENAFSIHDMATTASRVGKVRQIIDSYNTELISEYDLSVGVAPGLPVR-VKGCVVTSADL-SVSAPETWEMKVRGTRVKSSNVPFIDEWLDDSQVEVPVGRVYEAINGGDVPAAILKTYYVDEGMRISRDADENF 288
BLAST of mRNA_P-fluviatile_contig14.2130.1 vs. uniprot
Match: A0A7S2Q3I4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q3I4_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 3.790e-17 Identity = 74/222 (33.33%), Postives = 118/222 (53.15%), Query Frame = 1
Query: 73 IKTSLLQVAAMTERGQLATEAQQNDMGVLVERLEDLKVDGGFEDENMVGIWTLVYSSSQAFRSSPFFAAFQALLGTQG--VAERVFSFTDTVSNA-KIGQARQIINEGCTELLSRVEMSVW-----PHRWVSGVVETRSK--IVNDDVGDRLELIVDDTGVSDSLLGKISPRLEE--LRLPVDQLSERLFDRIPRITLDTVFLDQDLRISRLPDRNFLIYVK 702
+K L+ ++++T RG AT + N + LV +LE L N G W L YSS+Q+FRSSPFF A ++ LG +AE F D + A ++G+ RQII++ EL+S E+SV P + V G V T ++ ++ + EL V T V S + + L++ L +PV + + + +P TL T ++D+ LRI+R D NF ++ +
Sbjct: 66 LKRELILLSSVTNRGSCATTEESNLVVDLVTQLEALNPTAD-PAANCQGDWELCYSSTQSFRSSPFFLAIRSFLGDDNKQIAESAFDIHDAATTASRVGKVRQIIDKNNNELVSEYEVSVGLLPGLPVQ-VKGTVITSAEMSVIRPE---SWELEVKGTKVKGSNVPFLDAFLDDSDLEVPVGEAYKAVSGAVPVSTLKTFYVDEGLRITRDVDENFYVFTR 282
BLAST of mRNA_P-fluviatile_contig14.2130.1 vs. uniprot
Match: A0A1X6P059_PORUM (PAP_fibrillin domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P059_PORUM) HSP 1 Score: 91.3 bits (225), Expect = 1.000e-16 Identity = 75/217 (34.56%), Postives = 111/217 (51.15%), Query Frame = 1
Query: 73 IKTSLLQVAAMTERGQLATEAQQNDMGVLVERLE-----DLKVDGGFEDENMVGIWTLVYSSSQAFRSSPFFAAFQALLGTQGVAERVFSFTDTVSNAKIGQARQIINEGCTELLSRVEMSVWPHRWVSGVVETRSKIVNDDVGDRLELIVDDTGVSD-SLLGKISPRLEELRLPVDQLSERLFD-RIPRITLDTVFLDQDLRISRLPDRNFLIYVK 702
+K LL++AA T+RGQLAT AQ+ + LV LE D VD D G W LVY+S F+++P A L +GQ +Q++ EL++ VE++ +P ++G V T ++ V G+RLEL+V+ TGV SL GK+ LPV+QL +L + +P LDT +LD+ +RISR + +Y K
Sbjct: 162 MKGKLLEIAAATDRGQLATSAQKEAVEDLVSMLEAANPTDSPVDTALID----GTWLLVYASKPLFKTTPLLLAAATPL------------------LVVGQVKQMLRVDSGELVNDVEVTAFP--MITGTVSTTAR-VTPITGERLELVVEKTGVKGKSLAGKLDLGGLGGSLPVEQLYGKLKNGAVPETFLDTFYLDEKMRISRGKGGSIYVYTK 353
BLAST of mRNA_P-fluviatile_contig14.2130.1 vs. uniprot
Match: A0A7S2Y236_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y236_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 4.270e-16 Identity = 79/222 (35.59%), Postives = 118/222 (53.15%), Query Frame = 1
Query: 73 IKTSLLQVAAMTERGQLATEAQQNDMGVLVERLEDLKVDGGFEDENMV--GIWTLVYSSSQAFRSSPFFAAFQALLGT--QGVAERVFSFTDTVSNA-KIGQARQIINEGCTELLSRVEMSVW-----PHRWVSGVVETRSKIVNDDVGDRLELIVDDTGVSDSLLGKISPRLEELRL--PVDQLSERLFDRIPRITLDTVFLDQDLRISRLPDRNFLIYVK 702
+K LL +++++ RG+ A+ QN + LV +LE L ED M G W L SS+Q FRSSPFF +A +G + +AE F D + A +IG+ RQ I G T L S V++ V P R V G V TR+ + EL V T V S + ++ L+ L+L PV+Q+ ER+ +P + L T ++D+ +RI+R D NF +Y +
Sbjct: 84 LKRELLLLSSVSNRGEFASLDDQNVITDLVAQLEALNPT---EDPAMKCEGEWDLALSSTQFFRSSPFFLTIRAAMGASNKAMAENAFDIHDRATTAGRIGRVRQTI-VGDT-LTSEVDLEVGVFPGLPFR-VKGSVITRASF-RPVSSETAELQVGATEVKGSNIPILNQYLDNLKLELPVNQIFERIQGSVPTVELKTYYIDEGMRITRDMDDNFFVYTR 298
BLAST of mRNA_P-fluviatile_contig14.2130.1 vs. uniprot
Match: A0A1Z5KQ85_FISSO (PAP_fibrillin domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQ85_FISSO) HSP 1 Score: 87.8 bits (216), Expect = 4.610e-16 Identity = 69/218 (31.65%), Postives = 117/218 (53.67%), Query Frame = 1
Query: 73 IKTSLLQVAAMTERGQLATEAQQNDMGVLVERLEDLKVDGGFEDENMVGIWTLVYSSSQAFRSSPFFAAFQALLGTQGVAERVFSFTDTVSN-AKIGQARQIINEGCTELLSRVEMSVW----PHRWVSGVVETRS-KIVNDDVGDRLELIVDDTGVSDSLLGKISPRLEELRL--PVDQLSERLFDRIPRITLDTVFLDQDLRISRLPDRNFLIYVK 702
+K LL ++++T RG+ ++ +QN + LV +LE L N G W L SS+Q FRSSPFF + + + + + F D S +++G+ RQ I++ L S V++ V P R VV T + K+V+DD+ EL + T V S + ++ LE+ RL P+ L +RL ++P + + T ++D+ +RI+R D NF ++ +
Sbjct: 51 LKRELLLLSSVTNRGEYCSKDEQNILVDLVAQLEALNPTAS-PARNCQGEWDLCLSSTQFFRSSPFFQSLRVAVNDKALINNGFDLHDRASTPSRVGRVRQTIDDN-NLLTSSVDLQVGFPLLPLRVEGTVVTTATMKVVSDDLA---ELQIVKTQVRGSNIPFLNEYLEDPRLDMPMGDLYQRLNGKVPVVPMKTYYVDEGMRIARDIDDNFFVFTR 263 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2130.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig14.2130.1 >prot_P-fluviatile_contig14.2130.1 ID=prot_P-fluviatile_contig14.2130.1|Name=mRNA_P-fluviatile_contig14.2130.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=232bp MVAGMSSVSAGADADEIALIKTSLLQVAAMTERGQLATEAQQNDMGVLVEback to top mRNA from alignment at P-fluviatile_contig14:1189305..1192641- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig14.2130.1 ID=mRNA_P-fluviatile_contig14.2130.1|Name=mRNA_P-fluviatile_contig14.2130.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3337bp|location=Sequence derived from alignment at P-fluviatile_contig14:1189305..1192641- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig14:1189305..1192641- >mRNA_P-fluviatile_contig14.2130.1 ID=mRNA_P-fluviatile_contig14.2130.1|Name=mRNA_P-fluviatile_contig14.2130.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1392bp|location=Sequence derived from alignment at P-fluviatile_contig14:1189305..1192641- (Porterinema fluviatile SAG_2381)back to top |