prot_P-fluviatile_contig14.2063.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig14.2063.1
Unique Nameprot_P-fluviatile_contig14.2063.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length211
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig14.2063.1 vs. uniprot
Match: D7FNH7_ECTSI (Tetracycline-efflux transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNH7_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 4.460e-33
Identity = 83/153 (54.25%), Postives = 92/153 (60.13%), Query Frame = 0 
Query:    1 MLYPALAFGALQNITEPCLQAVMATFVEADRQGGLQGAVMSLRVIGEGFAAPLFNQAFSAGSSAGFEEAPFLLATIFSLAGLAVRKGSITLSEIAWGRRARYRKVAWLPLRRLDKRKSHL-------PRRGSVTTPTTVGYQAAADGTRGIAE 146
            MLYPAL FGALQNITEPCLQA+MATFV  + QG LQGAVMSLRV+GEG AAP+F Q FSAG+S GFEEAPF LAT  SL  LA                     VAW PLR+LDK K+ +       PR     TP      AA D  +  AE
Sbjct:  451 MLYPALVFGALQNITEPCLQAIMATFVGPELQGSLQGAVMSLRVVGEGVAAPVFTQVFSAGASVGFEEAPFFLATAISLVSLA---------------------VAWWPLRKLDKTKNIVLPDHDASPRGWEPPTPAPTRAPAAGDEVQHAAE 582
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2063.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FNH7_ECTSI4.460e-3354.25Tetracycline-efflux transporter n=1 Tax=Ectocarpus... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig14contigP-fluviatile_contig14:628577..631641 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig14.2063.1mRNA_P-fluviatile_contig14.2063.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig14 627928..632958 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig14.2063.1 ID=prot_P-fluviatile_contig14.2063.1|Name=mRNA_P-fluviatile_contig14.2063.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=211bp
MLYPALAFGALQNITEPCLQAVMATFVEADRQGGLQGAVMSLRVIGEGFA
APLFNQAFSAGSSAGFEEAPFLLATIFSLAGLAVRKGSITLSEIAWGRRA
RYRKVAWLPLRRLDKRKSHLPRRGSVTTPTTVGYQAAADGTRGIAEERAA
ARATNENGGGGGCEGSDGNEAKTSVTVPKAATASAVGGGDSDGEGDDVMS
ANSSCPSGRG*
back to top