prot_P-fluviatile_contig13.1897.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig13.1897.1
Unique Name	prot_P-fluviatile_contig13.1897.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	214

Homology

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BLAST of mRNA_P-fluviatile_contig13.1897.1 vs. uniprot
Match: D7FV33_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV33_ECTSI)

HSP 1 Score: 342 bits (877), Expect = 1.040e-117
Identity = 176/214 (82.24%), Postives = 187/214 (87.38%), Query Frame = 0

Query:    4 MKITGAALLAMAASTQGF-VPV---PTIARTQGNALRMSASPSSAVNTISDAEAKASLEAIGGYDIETAGKPLDPLNLAKYIPAETLRKYETVHCRVAMLACVGYAFPQIFGMFDATDVQSANGIDAFFQTAPEAWAQIIGACGIVEAAQWKHQQSGETTPFYDPFKAWPKTEAEQEKMKMRELKNGRAAMLCWASFVSAALIPGSVPDFCLPF 213
            MKITGA +L M ASTQ F +P    P++AR      R S S +SA+  +SDAEA ASLEAIGGYD+ET GKPLDPL+LAKYIPAETLRKYETVHCRVAMLACVGYAFPQIFGMFDATDVQSANGIDA FQTAPEAWAQIIGACGI EAAQWKHQQSG+TTPFYDPFK WPKTE +QEKMKMRELKNGRAAMLCWASFVSAALIPGSVPDF LPF
Sbjct:    1 MKITGATVLGMVASTQAFHMPANVKPSVAR------RSSTSLASALEPLSDAEAMASLEAIGGYDVETLGKPLDPLHLAKYIPAETLRKYETVHCRVAMLACVGYAFPQIFGMFDATDVQSANGIDALFQTAPEAWAQIIGACGIAEAAQWKHQQSGDTTPFYDPFKGWPKTEKQQEKMKMRELKNGRAAMLCWASFVSAALIPGSVPDFALPF 208

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BLAST of mRNA_P-fluviatile_contig13.1897.1 vs. uniprot
Match: A0A7R9W903_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W903_9STRA)

HSP 1 Score: 131 bits (330), Expect = 7.850e-35
Identity = 78/201 (38.81%), Postives = 115/201 (57.21%), Query Frame = 0

Query:   13 AMAASTQGFVPVPTIARTQGNALRMSASPSSAVNTISDAEAKASLEAIGGYDIETAGKPLDPLNLAKYIPAETLRKYETVHCRVAMLACVGYAFPQIFGMFDATDVQSANGIDAFFQTAPEAWAQIIGACGIVEAAQWKHQQSGETT-----PFYDPFKAWPKTEAEQEKMKMRELKNGRAAMLCWASFVSAALIPGSVPD 208
            A+A S  GF P  +   ++ ++L+MS+ P             A  E + G D+ET  K  DP   + YIPA+  R+ E  + R AMLA VG+ +PQIFG FD+TDV + + I AF +  P+ WAQ I  CG +EA +++    G+++     P  D  +++P  E  +  M+++ELKNGR AM+  AS+ SA  IPGSVP 
Sbjct:   11 ALAGSAHGFAPASS--GSKASSLQMSSMP-------------ADYEGMVGIDVETGNKFFDPCGFSNYIPAKWAREAELANGRSAMLASVGWLWPQIFGTFDSTDVTTTDPIKAFSEADPQWWAQFIIFCGTIEAYKYRKGLEGKSSTGGGEPAVDWMRSYPADEEGRRAMELKELKNGRLAMIAVASYFSAHFIPGSVPS 196

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BLAST of mRNA_P-fluviatile_contig13.1897.1 vs. uniprot
Match: A0A7S0ASU6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ASU6_9STRA)

HSP 1 Score: 127 bits (320), Expect = 2.160e-33
Identity = 68/149 (45.64%), Postives = 93/149 (62.42%), Query Frame = 0

Query:   62 GYDIETAGKPLDPLNLAKYIPAETLRKYETVHCRVAMLACVGYAFPQIFGMFDATDVQSANGIDAFFQTAPEAWAQIIGACGIVEAAQWKHQQSGET-----TPFYDPFKAWPKTEAEQEKMKMRELKNGRAAMLCWASFVSAALIPGS 205
            G D+E+ GK  DPLNLA++IPA+  R+ E  + R AMLA VG+ FP   G FD+ DV S + + A  +  P+ WAQ +  CG  EA ++K    G++      P  D  K +PK E E+ KM+++ELKNGR AM+  ASF+SA  IPGS
Sbjct:   49 GVDLESGGKFFDPLNLAQWIPAKWARETELANGRSAMLATVGWFFPYTLGTFDSQDVTSTDPMGAIMEADPQWWAQFVILCGTFEAYKYKKALEGKSYTGNGEPVIDYLKGYPKEEDERRKMELKELKNGRLAMIGVASFLSAHFIPGS 197

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BLAST of mRNA_P-fluviatile_contig13.1897.1 vs. uniprot
Match: A0A7S0PIU0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0PIU0_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.180e-32
Identity = 69/174 (39.66%), Postives = 104/174 (59.77%), Query Frame = 0

Query:   41 PSSAVNTISDAEAKASLEAIGGYDIETAGKPLDPLNLAKYIPAETLRKYETVHCRVAMLACVGYAFPQIFGMFDATDVQSANGIDAFFQTAPEAWAQIIGACGIVEAAQWKHQQS-------GETTPFYDPFKAWPKTEAEQEKMKMRELKNGRAAMLCWASFVSAALIPGSVP 207
            P++A    +  +A +  E + G  +ET GK  DP  +++Y+PA+  R+ E  + R AMLA VG+ +PQ+ G FD+ DV + + IDA  Q  P+ WAQ I  CG++E   WK+ ++       G   P  D  K +P   A++ +++ +ELKN R AM+ +ASFVSA  IPGSVP
Sbjct:   18 PNTAPKVTTSLKAASDFEGMTGISVETGGKFFDPWGVSEYMPADWAREVELSNGRSAMLATVGWFWPQVVGTFDSNDVTTTDPIDAIMQADPQWWAQFIIFCGVIE--NWKYNKAKEGKSYTGGGEPAVDWMKLYPSDPAKRLELEEKELKNARLAMIGFASFVSAHFIPGSVP 189

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BLAST of mRNA_P-fluviatile_contig13.1897.1 vs. uniprot
Match: A0A7S2R2M8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R2M8_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.570e-32
Identity = 69/151 (45.70%), Postives = 89/151 (58.94%), Query Frame = 0

Query:   62 GYDIETAGKPLDPLNLAKYIPAETLRKYETVHCRVAMLACVGYAFPQIFGMFDATDVQSANGIDAFFQTAPEAWAQIIGACGIVEAAQWKHQQSGET-----TPFYDPFKAWPKTEAEQEKMKMRELKNGRAAMLCWASFVSAALIPGSVP 207
            G D+ET  K  DP  L+ YIPA+  R+ E  + R AMLA VGY FP  FG FD+TDV + + IDA  Q  P+ WAQ I  CG  E  +++    G+T      P  D    +PK EA++  M ++ELKNGR AM+  A FVS   IPG+VP
Sbjct:   39 GIDVETGKKFFDPWGLSGYIPAKWAREAELSNGRSAMLATVGYVFPAYFGTFDSTDVTTTDPIDAILQADPQWWAQFILLCGAFEGVKYRCALEGKTFTGIGEPAVDYANLYPKEEAKRADMHLKELKNGRLAMIGIAGFVSNHFIPGAVP 189

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BLAST of mRNA_P-fluviatile_contig13.1897.1 vs. uniprot
Match: A0A7S1H281_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H281_9STRA)

HSP 1 Score: 125 bits (313), Expect = 2.610e-32
Identity = 69/156 (44.23%), Postives = 98/156 (62.82%), Query Frame = 0

Query:   58 EAIGGYDIETAGKPLDPLNLAKYIPAETLRKYETVHCRVAMLACVGYAFPQIFGMFDATDVQSANGIDAFFQTAPEAWAQIIGACGIVEAAQWKHQQSGET-----TPFYDPFKAWPK-TEAEQEKMKMRELKNGRAAMLCWASFVSAALIPGSVP 207
            E++ G D+ET  K  DP  L+++IPAE  RK E  + R AMLA VG+ +P+ FG F + DV + + I+A  Q  P+ WAQ I  CG+ E  +++ +  G++      P  D  K W K ++A++E +++RELKNGR AML  ASF SA  IPGSVP
Sbjct:   35 ESLVGMDVETGKKFFDPWELSQWIPAEHARKAELANGRSAMLATVGWFWPKFFGTFASDDVTTTDPIEAVMQADPQWWAQFIVLCGVAEFVKYQGELEGKSYTGDGEPVLDWTKTWSKLSDAKKEDIRLRELKNGRLAMLGIASFFSAHFIPGSVP 190

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BLAST of mRNA_P-fluviatile_contig13.1897.1 vs. uniprot
Match: A0A7S2D2F8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D2F8_9STRA)

HSP 1 Score: 123 bits (309), Expect = 1.390e-31
Identity = 63/146 (43.15%), Postives = 86/146 (58.90%), Query Frame = 0

Query:   62 GYDIETAGKPLDPLNLAKYIPAETLRKYETVHCRVAMLACVGYAFPQIFGMFDATDVQSANGIDAFFQTAPEAWAQIIGACGIVEAAQWKHQQSGETTPFYDPFKAWPKTEAEQEKMKMRELKNGRAAMLCWASFVSAALIPGSVP 207
            G  +E   KP DPL LA +   + +R  E  + RVAMLA VG+ +PQ+FG+F++ DV + + I A  Q APE W Q+    G  E+ ++KH+ SG   P +DP    PK   ++      ELKNGR AML  A++ SA  IPGSVP
Sbjct:   59 GATVEVGKKPFDPLGLAAWRDFDEMRACELKNGRVAMLASVGWVWPQMFGLFESDDVTTTDPIAAITQVAPEGWIQMFLLAGCFESLEYKHKMSGTDKPLWDPLDLMPKDPVKKAAKMESELKNGRLAMLSVAAYASAHFIPGSVP 204

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BLAST of mRNA_P-fluviatile_contig13.1897.1 vs. uniprot
Match: A0A7S2RJJ1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJJ1_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.460e-31
Identity = 65/146 (44.52%), Postives = 87/146 (59.59%), Query Frame = 0

Query:   62 GYDIETAGKPLDPLNLAKYIPAETLRKYETVHCRVAMLACVGYAFPQIFGMFDATDVQSANGIDAFFQTAPEAWAQIIGACGIVEAAQWKHQQSGETTPFYDPFKAWPKTEAEQEKMKMRELKNGRAAMLCWASFVSAALIPGSVP 207
            G   E   K  DPL LA+Y   + LR  ET + RVAMLA VG+ +PQIFG +    V++ + I+        AWAQ+I    + E   +KH+QSG T P +DP +  PK E  ++ M  +ELKNGR AML +A+FVS   IPG+VP
Sbjct:   48 GATTEVGNKAFDPLKLAQYRDFDELRACETRNGRVAMLASVGWVWPQIFGTWAGGPVKTVDPIETLSAVPVAAWAQMILLASVFEVIDFKHKQSGSTEPVWDPLQLLPKEEKAKKAMMEKELKNGRLAMLAFAAFVSEHFIPGAVP 193

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BLAST of mRNA_P-fluviatile_contig13.1897.1 vs. uniprot
Match: B7G8E5_PHATC (Fucoxanthin chlorophyll a/c protein, deviant n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G8E5_PHATC)

HSP 1 Score: 118 bits (296), Expect = 8.830e-30
Identity = 70/161 (43.48%), Postives = 99/161 (61.49%), Query Frame = 0

Query:   53 AKASLEAIGGYDIETAGKPLDPLNLAKYIPAETLRKYETVHCRVAMLACVGYAFPQIFGMFDATDVQSANGIDAFFQTAPEAWAQIIGACGIVEAAQWKHQ-----QSGETTPFYDPFKAWPKTEAEQ-EKMKMRELKNGRAAMLCWASFVSAALIPGSVP 207
            A A L+ + G DIET  K  DP+ LA++ PA+ LRK E  + R AMLA VG+ +P+I G FD+ DV + + I A  +   + WAQ    CG++EA +++ +      +GE     D  K W K  A+Q E M+++ELKNGR AML +AS+V+   IPGSVP
Sbjct:   33 ATAELDNMLGVDIETGKKIFDPVGLAQWAPADFLRKAELSNGRSAMLANVGWFWPKIVGTFDSQDVTTTDPIKAIAEADLQWWAQFFVFCGMLEAVKYRGELEGKSYTGEGPAVIDWAKQWDKLNADQKESMRLKELKNGRLAMLGFASYVANYYIPGSVP 193

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BLAST of mRNA_P-fluviatile_contig13.1897.1 vs. uniprot
Match: A0A1Z5KCJ7_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KCJ7_FISSO)

HSP 1 Score: 114 bits (286), Expect = 2.400e-28
Identity = 66/173 (38.15%), Postives = 101/173 (58.38%), Query Frame = 0

Query:   41 PSSAVNTISDAEAKASLEAIGGYDIETAGKPLDPLNLAKYIPAETLRKYETVHCRVAMLACVGYAFPQIFGMFDATDVQSANGIDAFFQTAPEAWAQIIGACGIVEAAQWKHQQSGETTPFYDPF-----KAWPKTE-AEQEKMKMRELKNGRAAMLCWASFVSAALIPGSVP 207
            PS++V   S     A + ++ G   E   +  DPL L ++  AE LRK E  + R AMLA VG+ +P+I G FD+ DV + + IDA  Q  P+ WAQ +  CG++E  +++ +  G++     P      K W K +  ++  M+++ELKNGR AM+ +AS+V+A  IPGSVP
Sbjct:   20 PSASVKKSSLPATAAEIASLPGISNECGNRVFDPLELGQWADAEFLRKAELSNGRSAMLANVGWFWPKIVGTFDSDDVTTTDPIDAILQADPQWWAQFLLLCGVIEGVKYRAELEGKSYTGDGPAAIDWAKQWDKLDKTKKADMRLKELKNGRLAMIGFASYVAAYFIPGSVP 192

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig13.1897.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig13.1897.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FV33_ECTSI	1.040e-117	82.24	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]
A0A7R9W903_9STRA	7.850e-35	38.81	Hypothetical protein n=1 Tax=Pseudictyota dubia Ta...	[more]
A0A7S0ASU6_9STRA	2.160e-33	45.64	Hypothetical protein (Fragment) n=1 Tax=Minutocell...	[more]
A0A7S0PIU0_9STRA	1.180e-32	39.66	Hypothetical protein n=1 Tax=Leptocylindrus aporus...	[more]
A0A7S2R2M8_9STRA	1.570e-32	45.70	Hypothetical protein n=1 Tax=Eucampia antarctica T...	[more]
A0A7S1H281_9STRA	2.610e-32	44.23	Hypothetical protein n=1 Tax=Thalassionema nitzsch...	[more]
A0A7S2D2F8_9STRA	1.390e-31	43.15	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A7S2RJJ1_9STRA	1.460e-31	44.52	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
B7G8E5_PHATC	8.830e-30	43.48	Fucoxanthin chlorophyll a/c protein, deviant n=3 T...	[more]
A0A1Z5KCJ7_FISSO	2.400e-28	38.15	Uncharacterized protein n=2 Tax=Fistulifera solari...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 68..200 e-value: 1.0E-23 score: 84.6
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10		coord: 62..210 e-value: 2.3E-23 score: 84.9
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 9..207
None	No IPR available	PANTHER	PTHR21649:SF63		coord: 9..207
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..28
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..5
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 29..213
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 6..16
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..28
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..20 score: 0.631
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 73..205

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig13	contig	P-fluviatile_contig13:2693923..2696915 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig13.1897.1	mRNA_P-fluviatile_contig13.1897.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig13 2693846..2697424 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig13.1897.1 ID=prot_P-fluviatile_contig13.1897.1|Name=mRNA_P-fluviatile_contig13.1897.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=214bp
MATMKITGAALLAMAASTQGFVPVPTIARTQGNALRMSASPSSAVNTISD
AEAKASLEAIGGYDIETAGKPLDPLNLAKYIPAETLRKYETVHCRVAMLA
CVGYAFPQIFGMFDATDVQSANGIDAFFQTAPEAWAQIIGACGIVEAAQW
KHQQSGETTPFYDPFKAWPKTEAEQEKMKMRELKNGRAAMLCWASFVSAA
LIPGSVPDFCLPF*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR022796	Chloroa_b-bind
IPR023329	Chlorophyll_a/b-bd_dom_sf
IPR001344	Chloro_AB-bd_pln