mRNA_P-fluviatile_contig13.1897.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig13.1897.1 vs. uniprot
Match: D7FV33_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV33_ECTSI) HSP 1 Score: 342 bits (877), Expect = 1.400e-114 Identity = 176/214 (82.24%), Postives = 187/214 (87.38%), Query Frame = 3
Query: 87 MKITGAALLAMAASTQGF-VPV---PTIARTQGNALRMSASPSSAVNTISDAEAKASLEAIGGYDIETAGKPLDPLNLAKYIPAETLRKYETVHCRVAMLACVGYAFPQIFGMFDATDVQSANGIDAFFQTAPEAWAQIIGACGIVEAAQWKHQQSGETTPFYDPFKAWPKTEAEQEKMKMRELKNGRAAMLCWASFVSAALIPGSVPDFCLPF 716
MKITGA +L M ASTQ F +P P++AR R S S +SA+ +SDAEA ASLEAIGGYD+ET GKPLDPL+LAKYIPAETLRKYETVHCRVAMLACVGYAFPQIFGMFDATDVQSANGIDA FQTAPEAWAQIIGACGI EAAQWKHQQSG+TTPFYDPFK WPKTE +QEKMKMRELKNGRAAMLCWASFVSAALIPGSVPDF LPF
Sbjct: 1 MKITGATVLGMVASTQAFHMPANVKPSVAR------RSSTSLASALEPLSDAEAMASLEAIGGYDVETLGKPLDPLHLAKYIPAETLRKYETVHCRVAMLACVGYAFPQIFGMFDATDVQSANGIDALFQTAPEAWAQIIGACGIAEAAQWKHQQSGDTTPFYDPFKGWPKTEKQQEKMKMRELKNGRAAMLCWASFVSAALIPGSVPDFALPF 208
BLAST of mRNA_P-fluviatile_contig13.1897.1 vs. uniprot
Match: A0A7R9W903_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W903_9STRA) HSP 1 Score: 131 bits (330), Expect = 1.010e-32 Identity = 78/201 (38.81%), Postives = 115/201 (57.21%), Query Frame = 3
Query: 114 AMAASTQGFVPVPTIARTQGNALRMSASPSSAVNTISDAEAKASLEAIGGYDIETAGKPLDPLNLAKYIPAETLRKYETVHCRVAMLACVGYAFPQIFGMFDATDVQSANGIDAFFQTAPEAWAQIIGACGIVEAAQWKHQQSGETT-----PFYDPFKAWPKTEAEQEKMKMRELKNGRAAMLCWASFVSAALIPGSVPD 701
A+A S GF P + ++ ++L+MS+ P A E + G D+ET K DP + YIPA+ R+ E + R AMLA VG+ +PQIFG FD+TDV + + I AF + P+ WAQ I CG +EA +++ G+++ P D +++P E + M+++ELKNGR AM+ AS+ SA IPGSVP
Sbjct: 11 ALAGSAHGFAPASS--GSKASSLQMSSMP-------------ADYEGMVGIDVETGNKFFDPCGFSNYIPAKWAREAELANGRSAMLASVGWLWPQIFGTFDSTDVTTTDPIKAFSEADPQWWAQFIIFCGTIEAYKYRKGLEGKSSTGGGEPAVDWMRSYPADEEGRRAMELKELKNGRLAMIAVASYFSAHFIPGSVPS 196
BLAST of mRNA_P-fluviatile_contig13.1897.1 vs. uniprot
Match: A0A7S0ASU6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ASU6_9STRA) HSP 1 Score: 127 bits (320), Expect = 2.470e-31 Identity = 68/149 (45.64%), Postives = 93/149 (62.42%), Query Frame = 3
Query: 261 GYDIETAGKPLDPLNLAKYIPAETLRKYETVHCRVAMLACVGYAFPQIFGMFDATDVQSANGIDAFFQTAPEAWAQIIGACGIVEAAQWKHQQSGET-----TPFYDPFKAWPKTEAEQEKMKMRELKNGRAAMLCWASFVSAALIPGS 692
G D+E+ GK DPLNLA++IPA+ R+ E + R AMLA VG+ FP G FD+ DV S + + A + P+ WAQ + CG EA ++K G++ P D K +PK E E+ KM+++ELKNGR AM+ ASF+SA IPGS
Sbjct: 49 GVDLESGGKFFDPLNLAQWIPAKWARETELANGRSAMLATVGWFFPYTLGTFDSQDVTSTDPMGAIMEADPQWWAQFVILCGTFEAYKYKKALEGKSYTGNGEPVIDYLKGYPKEEDERRKMELKELKNGRLAMIGVASFLSAHFIPGS 197
BLAST of mRNA_P-fluviatile_contig13.1897.1 vs. uniprot
Match: A0A7S0PIU0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0PIU0_9STRA) HSP 1 Score: 125 bits (315), Expect = 1.270e-30 Identity = 69/174 (39.66%), Postives = 104/174 (59.77%), Query Frame = 3
Query: 198 PSSAVNTISDAEAKASLEAIGGYDIETAGKPLDPLNLAKYIPAETLRKYETVHCRVAMLACVGYAFPQIFGMFDATDVQSANGIDAFFQTAPEAWAQIIGACGIVEAAQWKHQQS-------GETTPFYDPFKAWPKTEAEQEKMKMRELKNGRAAMLCWASFVSAALIPGSVP 698
P++A + +A + E + G +ET GK DP +++Y+PA+ R+ E + R AMLA VG+ +PQ+ G FD+ DV + + IDA Q P+ WAQ I CG++E WK+ ++ G P D K +P A++ +++ +ELKN R AM+ +ASFVSA IPGSVP
Sbjct: 18 PNTAPKVTTSLKAASDFEGMTGISVETGGKFFDPWGVSEYMPADWAREVELSNGRSAMLATVGWFWPQVVGTFDSNDVTTTDPIDAIMQADPQWWAQFIIFCGVIE--NWKYNKAKEGKSYTGGGEPAVDWMKLYPSDPAKRLELEEKELKNARLAMIGFASFVSAHFIPGSVP 189
BLAST of mRNA_P-fluviatile_contig13.1897.1 vs. uniprot
Match: A0A7S2R2M8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R2M8_9STRA) HSP 1 Score: 125 bits (314), Expect = 1.680e-30 Identity = 69/151 (45.70%), Postives = 89/151 (58.94%), Query Frame = 3
Query: 261 GYDIETAGKPLDPLNLAKYIPAETLRKYETVHCRVAMLACVGYAFPQIFGMFDATDVQSANGIDAFFQTAPEAWAQIIGACGIVEAAQWKHQQSGET-----TPFYDPFKAWPKTEAEQEKMKMRELKNGRAAMLCWASFVSAALIPGSVP 698
G D+ET K DP L+ YIPA+ R+ E + R AMLA VGY FP FG FD+TDV + + IDA Q P+ WAQ I CG E +++ G+T P D +PK EA++ M ++ELKNGR AM+ A FVS IPG+VP
Sbjct: 39 GIDVETGKKFFDPWGLSGYIPAKWAREAELSNGRSAMLATVGYVFPAYFGTFDSTDVTTTDPIDAILQADPQWWAQFILLCGAFEGVKYRCALEGKTFTGIGEPAVDYANLYPKEEAKRADMHLKELKNGRLAMIGIAGFVSNHFIPGAVP 189
BLAST of mRNA_P-fluviatile_contig13.1897.1 vs. uniprot
Match: A0A7S1H281_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H281_9STRA) HSP 1 Score: 125 bits (313), Expect = 2.750e-30 Identity = 69/156 (44.23%), Postives = 98/156 (62.82%), Query Frame = 3
Query: 249 EAIGGYDIETAGKPLDPLNLAKYIPAETLRKYETVHCRVAMLACVGYAFPQIFGMFDATDVQSANGIDAFFQTAPEAWAQIIGACGIVEAAQWKHQQSGET-----TPFYDPFKAWPK-TEAEQEKMKMRELKNGRAAMLCWASFVSAALIPGSVP 698
E++ G D+ET K DP L+++IPAE RK E + R AMLA VG+ +P+ FG F + DV + + I+A Q P+ WAQ I CG+ E +++ + G++ P D K W K ++A++E +++RELKNGR AML ASF SA IPGSVP
Sbjct: 35 ESLVGMDVETGKKFFDPWELSQWIPAEHARKAELANGRSAMLATVGWFWPKFFGTFASDDVTTTDPIEAVMQADPQWWAQFIVLCGVAEFVKYQGELEGKSYTGDGEPVLDWTKTWSKLSDAKKEDIRLRELKNGRLAMLGIASFFSAHFIPGSVP 190
BLAST of mRNA_P-fluviatile_contig13.1897.1 vs. uniprot
Match: A0A7S2D2F8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D2F8_9STRA) HSP 1 Score: 123 bits (309), Expect = 1.400e-29 Identity = 63/146 (43.15%), Postives = 86/146 (58.90%), Query Frame = 3
Query: 261 GYDIETAGKPLDPLNLAKYIPAETLRKYETVHCRVAMLACVGYAFPQIFGMFDATDVQSANGIDAFFQTAPEAWAQIIGACGIVEAAQWKHQQSGETTPFYDPFKAWPKTEAEQEKMKMRELKNGRAAMLCWASFVSAALIPGSVP 698
G +E KP DPL LA + + +R E + RVAMLA VG+ +PQ+FG+F++ DV + + I A Q APE W Q+ G E+ ++KH+ SG P +DP PK ++ ELKNGR AML A++ SA IPGSVP
Sbjct: 59 GATVEVGKKPFDPLGLAAWRDFDEMRACELKNGRVAMLASVGWVWPQMFGLFESDDVTTTDPIAAITQVAPEGWIQMFLLAGCFESLEYKHKMSGTDKPLWDPLDLMPKDPVKKAAKMESELKNGRLAMLSVAAYASAHFIPGSVP 204
BLAST of mRNA_P-fluviatile_contig13.1897.1 vs. uniprot
Match: A0A7S2RJJ1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJJ1_9STRA) HSP 1 Score: 123 bits (308), Expect = 1.450e-29 Identity = 65/146 (44.52%), Postives = 87/146 (59.59%), Query Frame = 3
Query: 261 GYDIETAGKPLDPLNLAKYIPAETLRKYETVHCRVAMLACVGYAFPQIFGMFDATDVQSANGIDAFFQTAPEAWAQIIGACGIVEAAQWKHQQSGETTPFYDPFKAWPKTEAEQEKMKMRELKNGRAAMLCWASFVSAALIPGSVP 698
G E K DPL LA+Y + LR ET + RVAMLA VG+ +PQIFG + V++ + I+ AWAQ+I + E +KH+QSG T P +DP + PK E ++ M +ELKNGR AML +A+FVS IPG+VP
Sbjct: 48 GATTEVGNKAFDPLKLAQYRDFDELRACETRNGRVAMLASVGWVWPQIFGTWAGGPVKTVDPIETLSAVPVAAWAQMILLASVFEVIDFKHKQSGSTEPVWDPLQLLPKEEKAKKAMMEKELKNGRLAMLAFAAFVSEHFIPGAVP 193
BLAST of mRNA_P-fluviatile_contig13.1897.1 vs. uniprot
Match: B7G8E5_PHATC (Fucoxanthin chlorophyll a/c protein, deviant n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G8E5_PHATC) HSP 1 Score: 118 bits (296), Expect = 7.500e-28 Identity = 70/161 (43.48%), Postives = 99/161 (61.49%), Query Frame = 3
Query: 234 AKASLEAIGGYDIETAGKPLDPLNLAKYIPAETLRKYETVHCRVAMLACVGYAFPQIFGMFDATDVQSANGIDAFFQTAPEAWAQIIGACGIVEAAQWKHQ-----QSGETTPFYDPFKAWPKTEAEQ-EKMKMRELKNGRAAMLCWASFVSAALIPGSVP 698
A A L+ + G DIET K DP+ LA++ PA+ LRK E + R AMLA VG+ +P+I G FD+ DV + + I A + + WAQ CG++EA +++ + +GE D K W K A+Q E M+++ELKNGR AML +AS+V+ IPGSVP
Sbjct: 33 ATAELDNMLGVDIETGKKIFDPVGLAQWAPADFLRKAELSNGRSAMLANVGWFWPKIVGTFDSQDVTTTDPIKAIAEADLQWWAQFFVFCGMLEAVKYRGELEGKSYTGEGPAVIDWAKQWDKLNADQKESMRLKELKNGRLAMLGFASYVANYYIPGSVP 193
BLAST of mRNA_P-fluviatile_contig13.1897.1 vs. uniprot
Match: A0A1Z5KCJ7_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KCJ7_FISSO) HSP 1 Score: 114 bits (286), Expect = 1.780e-26 Identity = 66/173 (38.15%), Postives = 101/173 (58.38%), Query Frame = 3
Query: 198 PSSAVNTISDAEAKASLEAIGGYDIETAGKPLDPLNLAKYIPAETLRKYETVHCRVAMLACVGYAFPQIFGMFDATDVQSANGIDAFFQTAPEAWAQIIGACGIVEAAQWKHQQSGETTPFYDPF-----KAWPKTE-AEQEKMKMRELKNGRAAMLCWASFVSAALIPGSVP 698
PS++V S A + ++ G E + DPL L ++ AE LRK E + R AMLA VG+ +P+I G FD+ DV + + IDA Q P+ WAQ + CG++E +++ + G++ P K W K + ++ M+++ELKNGR AM+ +AS+V+A IPGSVP
Sbjct: 20 PSASVKKSSLPATAAEIASLPGISNECGNRVFDPLELGQWADAEFLRKAELSNGRSAMLANVGWFWPKIVGTFDSDDVTTTDPIDAILQADPQWWAQFLLLCGVIEGVKYRAELEGKSYTGDGPAAIDWAKQWDKLDKTKKADMRLKELKNGRLAMIGFASYVAAYFIPGSVP 192 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1897.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig13.1897.1 >prot_P-fluviatile_contig13.1897.1 ID=prot_P-fluviatile_contig13.1897.1|Name=mRNA_P-fluviatile_contig13.1897.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=214bp MATMKITGAALLAMAASTQGFVPVPTIARTQGNALRMSASPSSAVNTISDback to top mRNA from alignment at P-fluviatile_contig13:2693846..2697424+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig13.1897.1 ID=mRNA_P-fluviatile_contig13.1897.1|Name=mRNA_P-fluviatile_contig13.1897.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3579bp|location=Sequence derived from alignment at P-fluviatile_contig13:2693846..2697424+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig13:2693846..2697424+ >mRNA_P-fluviatile_contig13.1897.1 ID=mRNA_P-fluviatile_contig13.1897.1|Name=mRNA_P-fluviatile_contig13.1897.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1284bp|location=Sequence derived from alignment at P-fluviatile_contig13:2693846..2697424+ (Porterinema fluviatile SAG_2381)back to top |