prot_P-fluviatile_contig13.1845.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig13.1845.1
Unique Nameprot_P-fluviatile_contig13.1845.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length227
Homology
BLAST of mRNA_P-fluviatile_contig13.1845.1 vs. uniprot
Match: D8LS40_ECTSI (Rab50, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS40_ECTSI)

HSP 1 Score: 412 bits (1060), Expect = 4.290e-145
Identity = 207/226 (91.59%), Postives = 213/226 (94.25%), Query Frame = 0
Query:    1 MAEPVAPKTSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVAELRTNVPEGKLVLAIACTKTDMESNRVVSRARAEQFATEVGGILCETSAKENWGVNELFARVCDRAMETRGPELRGELPGGTAGAGGRKSKYSLSPDATAAGYGGDSASESSGGCCG 226
            MAEP APKTSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWV ELRTNVPEGKLVLAIACTKTDMES RVVSRARAE FATEVGGI+CETSAKENWGVNELFARVCDRAMETRGPELRG+  GG AG GGRKSK+ LSP A AAG+GGD+ +ES GGCCG
Sbjct:    1 MAEPGAPKTSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEHFATEVGGIICETSAKENWGVNELFARVCDRAMETRGPELRGQASGGAAGTGGRKSKFGLSPAAHAAGFGGDTGAESGGGCCG 226          
BLAST of mRNA_P-fluviatile_contig13.1845.1 vs. uniprot
Match: A0A7S2XTR6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XTR6_9STRA)

HSP 1 Score: 286 bits (731), Expect = 1.570e-95
Identity = 136/173 (78.61%), Postives = 153/173 (88.44%), Query Frame = 0
Query:   11 VEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVAELRTNVPEGKLVLAIACTKTDMESNRVVSRARAEQFATEVGGILCETSAKENWGVNELFARVCDRAMETRGPEL 183
            VEFKVVVLGDKGVGKTCLVLRFIEGYF+PKQQSTIGAFFLTK+I    G  CKMQIWDTAGQERFRAMAP+YYRNAA A+VCFDI DE+SF KMKDWV EL+TNVPEGKLVLAIAC KTD+ESNRVVSRARAEQ++  +  I CETSAKENWGVNE+F +V ++ +ETRG ++
Sbjct:   11 VEFKVVVLGDKGVGKTCLVLRFIEGYFSPKQQSTIGAFFLTKKIQTEGGVNCKMQIWDTAGQERFRAMAPMYYRNAAAAIVCFDITDEDSFTKMKDWVEELKTNVPEGKLVLAIACNKTDLESNRVVSRARAEQYSAAIKAIYCETSAKENWGVNEIFEKVSEKVIETRGLQV 183          
BLAST of mRNA_P-fluviatile_contig13.1845.1 vs. uniprot
Match: A0A7S3Y4J2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4J2_HETAK)

HSP 1 Score: 283 bits (724), Expect = 8.160e-94
Identity = 140/193 (72.54%), Postives = 155/193 (80.31%), Query Frame = 0
Query:   11 VEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVAELRTNVPEGKLVLAIACTKTDMESNRVVSRARAEQFATEVGGILCETSAKENWGVNELFARVCDRAMETRGPELRGELPG-----GTAGAGGRK 198
            VEFKVVVLGDKGVGK+CLVLRFIEGYF+PKQQSTIGAFFL+K I A DGT CKMQIWDTAGQERFRAMA +YYRNAA A+VCFDI DEESF KMKDWV EL+ NVPEG+LVLAIA TKTD+E+ R VSR RAEQ+A  +G + CETSAKENWGV E+F     R +E RGPELR          G  GAGGR+
Sbjct:   12 VEFKVVVLGDKGVGKSCLVLRFIEGYFSPKQQSTIGAFFLSKTIEAADGTACKMQIWDTAGQERFRAMASMYYRNAAAAIVCFDITDEESFSKMKDWVQELKANVPEGRLVLAIAATKTDLEAQRAVSRGRAEQYAQSIGALCCETSAKENWGVTEVFEAAAARVLELRGPELRAAAQAQARGVGVYGAGGRR 204          
BLAST of mRNA_P-fluviatile_contig13.1845.1 vs. uniprot
Match: F0XY01_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY01_AURAN)

HSP 1 Score: 244 bits (623), Expect = 1.160e-78
Identity = 129/210 (61.43%), Postives = 154/210 (73.33%), Query Frame = 0
Query:   12 EFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVAELRTNVPEGKLVLAIACTKTDMESNRVVSRARAEQFATEVGGILCETSAKENWGVNELFARVCDRAMETRGPELRGELPGGTAGAGGRKSKYSLSPDATAAGYGGDSASESS 221
            EFK+V+LGD+GVGKTCLVLRFIEG +  +QQSTIGAFFLTK+I    G  CK+QIWDTAGQERFRAMAP+YYRNAA A+VCFD+ DE +F  MKDWV EL+TNV +  LV+AIAC K D+++ R VSRARAEQFA  +  I+ +TSAKEN+GV ELFA V +  ++ RG EL    PG   G GG      LS  A AAG+  D  S SS
Sbjct:   10 EFKIVLLGDRGVGKTCLVLRFIEGLYNSRQQSTIGAFFLTKKIVTAQGDACKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDVTDESTFNTMKDWVEELKTNVVDKNLVIAIACNKADLDT-RQVSRARAEQFARSISAIVLDTSAKENFGVAELFAAVSEHVIKLRGQELC-STPGAPRGGGGGPGGRGLSLAARAAGFRDDQQSASS 217          
BLAST of mRNA_P-fluviatile_contig13.1845.1 vs. uniprot
Match: A0A835ZBF8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBF8_9STRA)

HSP 1 Score: 234 bits (597), Expect = 1.610e-75
Identity = 113/165 (68.48%), Postives = 132/165 (80.00%), Query Frame = 0
Query:   12 EFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVAELRTNVPEGK--LVLAIACTKTDMESNRVVSRARAEQFATEVGGILCETSAKENWGVNELFARVCDR 174
            EFK+ VLGDKGVGKTCLVLRFIEGYF+  QQSTIGAFFLTK +   +G +CK+QIWDTAGQERFRAMAP+YYRNAA A+VC DI DEESF KMKDWV E++ NVP G+  L + +A  KTD+E  RVVSRARAE+FA  +G  + ETSA+ENWGV  LF   C+R
Sbjct:    1 EFKICVLGDKGVGKTCLVLRFIEGYFSQNQQSTIGAFFLTKSLPV-NGVLCKLQIWDTAGQERFRAMAPMYYRNAAAAIVCCDITDEESFDKMKDWVEEIKMNVPVGQQGLAIVLALNKTDLEERRVVSRARAEEFAASIGAAVVETSARENWGVARLFECACER 164          
BLAST of mRNA_P-fluviatile_contig13.1845.1 vs. uniprot
Match: A0A7S3NK22_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NK22_9STRA)

HSP 1 Score: 234 bits (597), Expect = 1.030e-74
Identity = 112/175 (64.00%), Postives = 140/175 (80.00%), Query Frame = 0
Query:   12 EFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVAELRTNVPEGKLVLAIACTKTDMESNRVVSRARAEQFATEVGGILCETSAKENWGVNELFARVCDRAMETRGPELRGE 186
            EFK+V+LGD+GVGKTCLVLRFIEG +  +QQSTIGAFFLTK+I  ++G  CK+QIWDTAGQERFRAMAP+YYRNAA A+VCFD+ DE +F  MKDWV EL+TNV +  LV+AIAC K D+++ R VSRARAE FA  +  I+ +TSAKEN+GV+ELF  V ++ +  RG EL  +
Sbjct:   15 EFKIVLLGDRGVGKTCLVLRFIEGLYNSRQQSTIGAFFLTKKIVTSNGDACKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDVTDESTFNTMKDWVEELKTNVVDKNLVIAIACNKADLDT-RQVSRARAESFARSIDAIILDTSAKENFGVSELFTAVSEQVITLRGHELEAQ 188          
BLAST of mRNA_P-fluviatile_contig13.1845.1 vs. uniprot
Match: A0A7S2BGJ2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BGJ2_9STRA)

HSP 1 Score: 231 bits (590), Expect = 1.640e-73
Identity = 112/162 (69.14%), Postives = 130/162 (80.25%), Query Frame = 0
Query:   22 GVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVAELRTNVPEGKLVLAIACTKTDMESNRVVSRARAEQFATEVGGILCETSAKENWGVNELFARVCDRAMETRGPEL 183
            GVGKTCLVLRFIEG F  KQQSTIGAFFLTK++   DG++CK+QIWDTAGQERFRAMAP+YYRNAA A+VCFDI DE SF  MKDWV ELR N  +  L+LAIAC K D+ S RVVSR RAE FA+ +  IL +TSAKEN GVNELF +V +R +E++G EL
Sbjct:   17 GVGKTCLVLRFIEGTFTQKQQSTIGAFFLTKKVQLEDGSMCKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDITDENSFSTMKDWVQELRRNCQDRDLILAIACNKADLSSTRVVSRERAESFASSIKAILMDTSAKENEGVNELFQKVTERVIESQGEEL 178          
BLAST of mRNA_P-fluviatile_contig13.1845.1 vs. uniprot
Match: A0A7S3ZPM5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPM5_9STRA)

HSP 1 Score: 227 bits (578), Expect = 6.660e-72
Identity = 115/179 (64.25%), Postives = 140/179 (78.21%), Query Frame = 0
Query:    6 APKTSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVAELRTNVPEGKLVLAIACTKTDMESNRVVSRARAEQFATEVG-GILCETSAKENWGVNELFARVCDRAMETRGPEL 183
            APK S EFKVV+LGD+GVGKTCLVLRFIEG +  +QQSTIGAFFLTK+I    G  CK+QIWDTAGQERFRAMAP+YYRNAA AVVCFD  D+ +FQ M+ WV ELR NV + KLV+AIA TK+D++ NR  +R +AE+FA+ +   ++ ETSAK + GV ELFA V +R +E RG EL
Sbjct:   10 APK-SYEFKVVLLGDRGVGKTCLVLRFIEGLYNARQQSTIGAFFLTKKIKTARGDDCKIQIWDTAGQERFRAMAPMYYRNAAAAVVCFDGTDQRTFQTMRTWVEELRANVDDKKLVIAIAITKSDLDENRAETRRKAEEFASSINDALVLETSAKNDVGVRELFATVAERVIELRGEEL 187          
BLAST of mRNA_P-fluviatile_contig13.1845.1 vs. uniprot
Match: A0A7R9U6V0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6V0_9STRA)

HSP 1 Score: 190 bits (483), Expect = 2.160e-57
Identity = 91/169 (53.85%), Postives = 116/169 (68.64%), Query Frame = 0
Query:    9 TSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVAELRTNVPEGKLVLAIACTKTDMESNRVVSRARAEQFATEVGGILCETSAKENWGVNELFARVCDRAME 177
            T  EFKVVV+G+K VGKT LVLRFI+G F P+QQ TIGAFF +K +    G  C +Q+WDTAGQERFRA+ P+YYR A  A+VCFD+  E SF+ M+ WV ELR N   G +V+AIA TK D+E+ RVV +     +A  +G +  ETSAK N GV +LF  +  R +E
Sbjct:    5 TPQEFKVVVVGEKSVGKTSLVLRFIDGCFQPQQQPTIGAFFFSKHLVLAGGAACVLQVWDTAGQERFRAITPMYYRQAMGAIVCFDVTSEASFETMQGWVKELRENTEPGSIVIAIAATKADLEAARVVDQEGPRLYAASIGALYAETSAKANVGVQDLFVTLGQRMLE 173          
BLAST of mRNA_P-fluviatile_contig13.1845.1 vs. uniprot
Match: A0A6S9BP90_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9BP90_9STRA)

HSP 1 Score: 187 bits (476), Expect = 1.950e-55
Identity = 99/189 (52.38%), Postives = 128/189 (67.72%), Query Frame = 0
Query:   12 EFKVVVLGDKGVGKTCLVLRFIEGYF--APKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVAELRTNVPEGKLVLAIACTKTDM----ESNRVVSRARAEQFATEVGGILCETSAKENWGVNELFARVCDRAMETRGPELRGELPGGTAGA 194
            EFKVV+LGD   GKT LVLRF EGY+  AP+  ST+GAFF+TK+I  + G  CK+QIWDTAGQ +FRAMAP+YYRNAA A+VC+D+ D +SF  M++W+ EL  NVP G +V+AIA TKTD+    ++  +V    A+  A  +G I  +TSAK N  V  LF RV +R ++ R    R E   GT GA
Sbjct:   10 EFKVVMLGDTNAGKTSLVLRFAEGYYRDAPRS-STVGAFFITKRIQTSSGITCKIQIWDTAGQSQFRAMAPMYYRNAAAAIVCYDVTDPQSFTVMREWLDELHRNVPAGSIVIAIAATKTDLSQTADATTLVPPNEAQDVANALGAIFVDTSAKSNSNVQVLFQRVAERVLQFR-ENARREGMNGTPGA 196          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1845.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS40_ECTSI4.290e-14591.59Rab50, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S2XTR6_9STRA1.570e-9578.61Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S3Y4J2_HETAK8.160e-9472.54Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
F0XY01_AURAN1.160e-7861.43Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A835ZBF8_9STRA1.610e-7568.48P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S3NK22_9STRA1.030e-7464.00Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2BGJ2_9STRA1.640e-7369.14Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3ZPM5_9STRA6.660e-7264.25Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7R9U6V0_9STRA2.160e-5753.85Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6S9BP90_9STRA1.950e-5552.38Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 13..34
score: 50.62
coord: 36..52
score: 29.94
coord: 55..77
score: 49.49
coord: 153..175
score: 31.84
coord: 118..131
score: 19.15
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 13..178
e-value: 7.7E-64
score: 228.1
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 15..178
e-value: 8.7E-11
score: 18.8
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 10..178
e-value: 1.1E-21
score: 88.1
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 18..221
e-value: 0.0013
score: 3.1
NoneNo IPR availableGENE3D3.40.50.300coord: 6..184
e-value: 9.4E-57
score: 193.5
NoneNo IPR availablePANTHERPTHR24073:SF366RAS-RELATED PROTEIN RAB-5Ccoord: 10..180
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 10..180
NoneNo IPR availablePROSITEPS51419RABcoord: 8..225
score: 28.062
IPR001806Small GTPasePFAMPF00071Rascoord: 14..175
e-value: 7.6E-51
score: 171.9
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 12..168
e-value: 3.1E-23
score: 80.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 9..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:2137565..2141451 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1845.1mRNA_P-fluviatile_contig13.1845.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig13 2135875..2141647 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig13.1845.1 ID=prot_P-fluviatile_contig13.1845.1|Name=mRNA_P-fluviatile_contig13.1845.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=227bp
MAEPVAPKTSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFL
TKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEES
FQKMKDWVAELRTNVPEGKLVLAIACTKTDMESNRVVSRARAEQFATEVG
GILCETSAKENWGVNELFARVCDRAMETRGPELRGELPGGTAGAGGRKSK
YSLSPDATAAGYGGDSASESSGGCCG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase