mRNA_P-fluviatile_contig13.1845.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig13.1845.1
Unique NamemRNA_P-fluviatile_contig13.1845.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig13.1845.1 vs. uniprot
Match: D8LS40_ECTSI (Rab50, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS40_ECTSI)

HSP 1 Score: 414 bits (1065), Expect = 9.660e-137
Identity = 207/226 (91.59%), Postives = 213/226 (94.25%), Query Frame = 2 
Query:  197 MAEPVAPKTSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVAELRTNVPEGKLVLAIACTKTDMESNRVVSRARAEQFATEVGGILCETSAKENWGVNELFARVCDRAMETRGPELRGELPGGTAGAGGRKSKYSLSPDATAAGYGGDSASESSGGCCG 874
            MAEP APKTSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWV ELRTNVPEGKLVLAIACTKTDMES RVVSRARAE FATEVGGI+CETSAKENWGVNELFARVCDRAMETRGPELRG+  GG AG GGRKSK+ LSP A AAG+GGD+ +ES GGCCG
Sbjct:    1 MAEPGAPKTSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEHFATEVGGIICETSAKENWGVNELFARVCDRAMETRGPELRGQASGGAAGTGGRKSKFGLSPAAHAAGFGGDTGAESGGGCCG 226
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BLAST of mRNA_P-fluviatile_contig13.1845.1 vs. uniprot
Match: A0A7S2XTR6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XTR6_9STRA)

HSP 1 Score: 286 bits (731), Expect = 8.500e-88
Identity = 136/173 (78.61%), Postives = 153/173 (88.44%), Query Frame = 2 
Query:  227 VEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVAELRTNVPEGKLVLAIACTKTDMESNRVVSRARAEQFATEVGGILCETSAKENWGVNELFARVCDRAMETRGPEL 745
            VEFKVVVLGDKGVGKTCLVLRFIEGYF+PKQQSTIGAFFLTK+I    G  CKMQIWDTAGQERFRAMAP+YYRNAA A+VCFDI DE+SF KMKDWV EL+TNVPEGKLVLAIAC KTD+ESNRVVSRARAEQ++  +  I CETSAKENWGVNE+F +V ++ +ETRG ++
Sbjct:   11 VEFKVVVLGDKGVGKTCLVLRFIEGYFSPKQQSTIGAFFLTKKIQTEGGVNCKMQIWDTAGQERFRAMAPMYYRNAAAAIVCFDITDEDSFTKMKDWVEELKTNVPEGKLVLAIACNKTDLESNRVVSRARAEQYSAAIKAIYCETSAKENWGVNEIFEKVSEKVIETRGLQV 183
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BLAST of mRNA_P-fluviatile_contig13.1845.1 vs. uniprot
Match: A0A7S3Y4J2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4J2_HETAK)

HSP 1 Score: 285 bits (729), Expect = 7.490e-87
Identity = 147/223 (65.92%), Postives = 164/223 (73.54%), Query Frame = 2 
Query:  227 VEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVAELRTNVPEGKLVLAIACTKTDMESNRVVSRARAEQFATEVGGILCETSAKENWGVNELFARVCDRAMETRGPELRGELPG-----GTAGAGGRKSKYSLSPDATAA--GYGGDSASESSGGCCG 874
            VEFKVVVLGDKGVGK+CLVLRFIEGYF+PKQQSTIGAFFL+K I A DGT CKMQIWDTAGQERFRAMA +YYRNAA A+VCFDI DEESF KMKDWV EL+ NVPEG+LVLAIA TKTD+E+ R VSR RAEQ+A  +G + CETSAKENWGV E+F     R +E RGPELR          G  GAGGR+    L+        G GG    +    CCG
Sbjct:   12 VEFKVVVLGDKGVGKSCLVLRFIEGYFSPKQQSTIGAFFLSKTIEAADGTACKMQIWDTAGQERFRAMASMYYRNAAAAIVCFDITDEESFSKMKDWVQELKANVPEGRLVLAIAATKTDLEAQRAVSRGRAEQYAQSIGALCCETSAKENWGVTEVFEAAAARVLELRGPELRAAAQAQARGVGVYGAGGRRPGAQLAAPGQGGPGGRGGFMDEQKQSWCCG 234
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BLAST of mRNA_P-fluviatile_contig13.1845.1 vs. uniprot
Match: F0XY01_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY01_AURAN)

HSP 1 Score: 246 bits (627), Expect = 3.010e-72
Identity = 130/214 (60.75%), Postives = 155/214 (72.43%), Query Frame = 2 
Query:  230 EFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVAELRTNVPEGKLVLAIACTKTDMESNRVVSRARAEQFATEVGGILCETSAKENWGVNELFARVCDRAMETRGPELRGELPGGTAGAGGRKSKYSLSPDATAAGYGGDSASESSGGCC 871
            EFK+V+LGD+GVGKTCLVLRFIEG +  +QQSTIGAFFLTK+I    G  CK+QIWDTAGQERFRAMAP+YYRNAA A+VCFD+ DE +F  MKDWV EL+TNV +  LV+AIAC K D+++ R VSRARAEQFA  +  I+ +TSAKEN+GV ELFA V +  ++ RG EL    PG   G GG      LS  A AAG+  D  S SS   C
Sbjct:   10 EFKIVLLGDRGVGKTCLVLRFIEGLYNSRQQSTIGAFFLTKKIVTAQGDACKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDVTDESTFNTMKDWVEELKTNVVDKNLVIAIACNKADLDT-RQVSRARAEQFARSISAIVLDTSAKENFGVAELFAAVSEHVIKLRGQELC-STPGAPRGGGGGPGGRGLSLAARAAGFRDDQQSASSCSNC 221
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BLAST of mRNA_P-fluviatile_contig13.1845.1 vs. uniprot
Match: A0A835ZBF8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBF8_9STRA)

HSP 1 Score: 234 bits (596), Expect = 1.320e-68
Identity = 113/165 (68.48%), Postives = 132/165 (80.00%), Query Frame = 2 
Query:  230 EFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVAELRTNVPEGK--LVLAIACTKTDMESNRVVSRARAEQFATEVGGILCETSAKENWGVNELFARVCDR 718
            EFK+ VLGDKGVGKTCLVLRFIEGYF+  QQSTIGAFFLTK +   +G +CK+QIWDTAGQERFRAMAP+YYRNAA A+VC DI DEESF KMKDWV E++ NVP G+  L + +A  KTD+E  RVVSRARAE+FA  +G  + ETSA+ENWGV  LF   C+R
Sbjct:    1 EFKICVLGDKGVGKTCLVLRFIEGYFSQNQQSTIGAFFLTKSLPV-NGVLCKLQIWDTAGQERFRAMAPMYYRNAAAAIVCCDITDEESFDKMKDWVEEIKMNVPVGQQGLAIVLALNKTDLEERRVVSRARAEEFAASIGAAVVETSARENWGVARLFECACER 164
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BLAST of mRNA_P-fluviatile_contig13.1845.1 vs. uniprot
Match: A0A7S3NK22_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NK22_9STRA)

HSP 1 Score: 234 bits (596), Expect = 8.450e-68
Identity = 112/175 (64.00%), Postives = 140/175 (80.00%), Query Frame = 2 
Query:  230 EFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVAELRTNVPEGKLVLAIACTKTDMESNRVVSRARAEQFATEVGGILCETSAKENWGVNELFARVCDRAMETRGPELRGE 754
            EFK+V+LGD+GVGKTCLVLRFIEG +  +QQSTIGAFFLTK+I  ++G  CK+QIWDTAGQERFRAMAP+YYRNAA A+VCFD+ DE +F  MKDWV EL+TNV +  LV+AIAC K D+++ R VSRARAE FA  +  I+ +TSAKEN+GV+ELF  V ++ +  RG EL  +
Sbjct:   15 EFKIVLLGDRGVGKTCLVLRFIEGLYNSRQQSTIGAFFLTKKIVTSNGDACKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDVTDESTFNTMKDWVEELKTNVVDKNLVIAIACNKADLDT-RQVSRARAESFARSIDAIILDTSAKENFGVSELFTAVSEQVITLRGHELEAQ 188
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BLAST of mRNA_P-fluviatile_contig13.1845.1 vs. uniprot
Match: A0A7S2BGJ2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BGJ2_9STRA)

HSP 1 Score: 231 bits (590), Expect = 8.440e-67
Identity = 112/162 (69.14%), Postives = 130/162 (80.25%), Query Frame = 2 
Query:  260 GVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVAELRTNVPEGKLVLAIACTKTDMESNRVVSRARAEQFATEVGGILCETSAKENWGVNELFARVCDRAMETRGPEL 745
            GVGKTCLVLRFIEG F  KQQSTIGAFFLTK++   DG++CK+QIWDTAGQERFRAMAP+YYRNAA A+VCFDI DE SF  MKDWV ELR N  +  L+LAIAC K D+ S RVVSR RAE FA+ +  IL +TSAKEN GVNELF +V +R +E++G EL
Sbjct:   17 GVGKTCLVLRFIEGTFTQKQQSTIGAFFLTKKVQLEDGSMCKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDITDENSFSTMKDWVQELRRNCQDRDLILAIACNKADLSSTRVVSRERAESFASSIKAILMDTSAKENEGVNELFQKVTERVIESQGEEL 178
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BLAST of mRNA_P-fluviatile_contig13.1845.1 vs. uniprot
Match: A0A7S3ZPM5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPM5_9STRA)

HSP 1 Score: 227 bits (578), Expect = 2.670e-65
Identity = 114/187 (60.96%), Postives = 141/187 (75.40%), Query Frame = 2 
Query:  188 LTTMAEPVAPKTSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVAELRTNVPEGKLVLAIACTKTDMESNRVVSRARAEQFATEVG-GILCETSAKENWGVNELFARVCDRAMETRGPEL 745
            +T +    A   S EFKVV+LGD+GVGKTCLVLRFIEG +  +QQSTIGAFFLTK+I    G  CK+QIWDTAGQERFRAMAP+YYRNAA AVVCFD  D+ +FQ M+ WV ELR NV + KLV+AIA TK+D++ NR  +R +AE+FA+ +   ++ ETSAK + GV ELFA V +R +E RG EL
Sbjct:    1 MTAIFNSAAAPKSYEFKVVLLGDRGVGKTCLVLRFIEGLYNARQQSTIGAFFLTKKIKTARGDDCKIQIWDTAGQERFRAMAPMYYRNAAAAVVCFDGTDQRTFQTMRTWVEELRANVDDKKLVIAIAITKSDLDENRAETRRKAEEFASSINDALVLETSAKNDVGVRELFATVAERVIELRGEEL 187
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BLAST of mRNA_P-fluviatile_contig13.1845.1 vs. uniprot
Match: A0A7R9U6V0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6V0_9STRA)

HSP 1 Score: 190 bits (483), Expect = 8.580e-52
Identity = 91/169 (53.85%), Postives = 116/169 (68.64%), Query Frame = 2 
Query:  221 TSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVAELRTNVPEGKLVLAIACTKTDMESNRVVSRARAEQFATEVGGILCETSAKENWGVNELFARVCDRAME 727
            T  EFKVVV+G+K VGKT LVLRFI+G F P+QQ TIGAFF +K +    G  C +Q+WDTAGQERFRA+ P+YYR A  A+VCFD+  E SF+ M+ WV ELR N   G +V+AIA TK D+E+ RVV +     +A  +G +  ETSAK N GV +LF  +  R +E
Sbjct:    5 TPQEFKVVVVGEKSVGKTSLVLRFIDGCFQPQQQPTIGAFFFSKHLVLAGGAACVLQVWDTAGQERFRAITPMYYRQAMGAIVCFDVTSEASFETMQGWVKELRENTEPGSIVIAIAATKADLEAARVVDQEGPRLYAASIGALYAETSAKANVGVQDLFVTLGQRMLE 173
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BLAST of mRNA_P-fluviatile_contig13.1845.1 vs. uniprot
Match: A0A6S9BP90_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9BP90_9STRA)

HSP 1 Score: 187 bits (475), Expect = 8.830e-50
Identity = 99/189 (52.38%), Postives = 128/189 (67.72%), Query Frame = 2 
Query:  230 EFKVVVLGDKGVGKTCLVLRFIEGYF--APKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVAELRTNVPEGKLVLAIACTKTDM----ESNRVVSRARAEQFATEVGGILCETSAKENWGVNELFARVCDRAMETRGPELRGELPGGTAGA 778
            EFKVV+LGD   GKT LVLRF EGY+  AP+  ST+GAFF+TK+I  + G  CK+QIWDTAGQ +FRAMAP+YYRNAA A+VC+D+ D +SF  M++W+ EL  NVP G +V+AIA TKTD+    ++  +V    A+  A  +G I  +TSAK N  V  LF RV +R ++ R    R E   GT GA
Sbjct:   10 EFKVVMLGDTNAGKTSLVLRFAEGYYRDAPRS-STVGAFFITKRIQTSSGITCKIQIWDTAGQSQFRAMAPMYYRNAAAAIVCYDVTDPQSFTVMREWLDELHRNVPAGSIVIAIAATKTDLSQTADATTLVPPNEAQDVANALGAIFVDTSAKSNSNVQVLFQRVAERVLQFR-ENARREGMNGTPGA 196
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1845.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS40_ECTSI9.660e-13791.59Rab50, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S2XTR6_9STRA8.500e-8878.61Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S3Y4J2_HETAK7.490e-8765.92Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
F0XY01_AURAN3.010e-7260.75Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A835ZBF8_9STRA1.320e-6868.48P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S3NK22_9STRA8.450e-6864.00Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2BGJ2_9STRA8.440e-6769.14Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3ZPM5_9STRA2.670e-6560.96Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7R9U6V0_9STRA8.580e-5253.85Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6S9BP90_9STRA8.830e-5052.38Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:2135875..2141647 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score416.4
Seed ortholog evalue8.6e-114
Seed eggNOG ortholog2880.D8LS40
KEGG koko:K07893,ko:K07976
EggNOG free text desc.GTPase activity
EggNOG OGsKOG0092@1,KOG0092@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04031,ko04131,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRab50, RAB family GTPase
Ec32 orthologEc-12_004900.1
Exons5
Model size2567
Cds size681
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815571.2444267-UTR-P-fluviatile_contig13:2135874..21375641622815571.2444267-UTR-P-fluviatile_contig13:2135874..2137564Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2135875..2137564 -
1693562281.6806116-UTR-P-fluviatile_contig13:2135874..21375641693562281.6806116-UTR-P-fluviatile_contig13:2135874..2137564Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2135875..2137564 -
1622815571.323652-UTR-P-fluviatile_contig13:2141451..21416471622815571.323652-UTR-P-fluviatile_contig13:2141451..2141647Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2141452..2141647 -
1693562281.7467651-UTR-P-fluviatile_contig13:2141451..21416471693562281.7467651-UTR-P-fluviatile_contig13:2141451..2141647Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2141452..2141647 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815571.2606132-CDS-P-fluviatile_contig13:2137564..21377351622815571.2606132-CDS-P-fluviatile_contig13:2137564..2137735Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2137565..2137735 -
1693562281.6900814-CDS-P-fluviatile_contig13:2137564..21377351693562281.6900814-CDS-P-fluviatile_contig13:2137564..2137735Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2137565..2137735 -
1622815571.2748935-CDS-P-fluviatile_contig13:2138546..21386721622815571.2748935-CDS-P-fluviatile_contig13:2138546..2138672Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2138547..2138672 -
1693562281.7010663-CDS-P-fluviatile_contig13:2138546..21386721693562281.7010663-CDS-P-fluviatile_contig13:2138546..2138672Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2138547..2138672 -
1622815571.2882733-CDS-P-fluviatile_contig13:2139644..21398641622815571.2882733-CDS-P-fluviatile_contig13:2139644..2139864Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2139645..2139864 -
1693562281.7117934-CDS-P-fluviatile_contig13:2139644..21398641693562281.7117934-CDS-P-fluviatile_contig13:2139644..2139864Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2139645..2139864 -
1622815571.2987742-CDS-P-fluviatile_contig13:2140424..21405461622815571.2987742-CDS-P-fluviatile_contig13:2140424..2140546Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2140425..2140546 -
1693562281.724568-CDS-P-fluviatile_contig13:2140424..21405461693562281.724568-CDS-P-fluviatile_contig13:2140424..2140546Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2140425..2140546 -
1622815571.3110287-CDS-P-fluviatile_contig13:2141409..21414511622815571.3110287-CDS-P-fluviatile_contig13:2141409..2141451Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2141410..2141451 -
1693562281.735685-CDS-P-fluviatile_contig13:2141409..21414511693562281.735685-CDS-P-fluviatile_contig13:2141409..2141451Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2141410..2141451 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1845.1prot_P-fluviatile_contig13.1845.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig13 2137565..2141451 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig13.1845.1

>prot_P-fluviatile_contig13.1845.1 ID=prot_P-fluviatile_contig13.1845.1|Name=mRNA_P-fluviatile_contig13.1845.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=227bp
MAEPVAPKTSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFL
TKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEES
FQKMKDWVAELRTNVPEGKLVLAIACTKTDMESNRVVSRARAEQFATEVG
GILCETSAKENWGVNELFARVCDRAMETRGPELRGELPGGTAGAGGRKSK
YSLSPDATAAGYGGDSASESSGGCCG*
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mRNA from alignment at P-fluviatile_contig13:2135875..2141647-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig13.1845.1 ID=mRNA_P-fluviatile_contig13.1845.1|Name=mRNA_P-fluviatile_contig13.1845.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5773bp|location=Sequence derived from alignment at P-fluviatile_contig13:2135875..2141647- (Porterinema fluviatile SAG_2381)
AGCAGAGAGAGGGAGAGAGTATAGTGGTGAGGTTTGTTAAAAGTCAGGAG
GATCTTCGACAGCTTCAGTATCTTGGCTTTCGTCAGATTATTGAGAATAA
TACGCAATACTTCCATTGTTCTACAACAGGGCAGTTTTTCTTTTTGCGGC
GAAACCCTGCTCTCCGCATTCAGACTCCCAGCAGGGCCTCACCACGATGG
CTGAGCCTGTGGCTCCGAAAACGTCGGTGGAGTTCAAGGTGCGCAGTCAA
AGGATTCCTTTCCAGGTGCTGTTTTCCACGACGATGTTATGCTTTCGAGG
TGGTACCACAGCTTCTCCTGTCAAAAAACGCGGTTTTTCGTTCTTCCGTT
GCTTGTGTGCGCAGACCCCATGGCGCTGCCGCACTCGAACGCATCTTGAG
TCTCTGCCGAAGAGTGCTCACTCTCGTTTCGATACCCACCTTACCCTTGA
CACCACGCACTTCTCAGTATTATGTTGGCTTCCGGGACGAAGAAATAAAA
AATGGTGATTTGATTAGATCTGTTTTGCTCATTTTGCGGGTCGATCATGC
GCGGCTCACATATGTCGTAAAACGAAGCGAACAAACGATTTCGATCGGGT
TACAAGAATCCGGCGCCGACTCATATCCGGCGTTTGTCTGTGCTTCAATA
CCGCGAGTAATATGTCCGATAAGGTTTTGCTTATCCTGCAAAGAGCAAGA
GGCACGCAAGTGGTAGCTTCGTCATGTTTAAGGGTCCACGTGTTGCATGT
TCTCCGTAACCATATCTCTGTGCCCTCCACGGACATTTAGTATGAAGGAA
AAGTCAAGGGGGTAGGAGAAAAGCTCCCTGTTTGACGCGTGTCTGCCCGC
ATGACACAGCGGTTGTGGTCTTCGAAAGTACTCTACTTCGTGTTTCCGGG
GGAAACATGCGTGACAGCCACGCACACGCACACACGGGCACAAATTGGGA
AATATGGTTTGCGAAGGCGAAACGGCGGCAGCGGGCGCAGGGGTGCAACA
GCAAAAAGAAAAGTCCTTCAATTTTCAGTCGCGTGCTCGTGTGTGGGCGA
CGACACGTGCATCGTCTCGTCGGTGCTGACGGTCCGGTCGGGTCCGCGCA
GGTGGTGGTCCTGGGGGATAAGGGAGTCGGGAAGACCTGCCTGGTGCTGC
GGTTCATAGAGGGGTACTTCGCGCCCAAGCAGCAGAGCACCATCGGGGCC
TTCTTCCTGACGAAGCAAATTACGTGAGAAGGATCAATTTGGCGTTTCGT
TTTTGGAGTGGAGGAGGCGAAGAGAGCAGCAGGGCGACATGGGGGTAGAG
GGGGCAGAGGATGGGGTAGATTGCGACACGCCTGGGTCGGTGATGAAGAT
GAACAGAAGTGACGCAGATGAAGCACATTGATTGTTTCGCTCTTAAGACG
TATCCTCTGCCAGCCACTCGAGATGCATCTCTCGACGTTCTTCGGATAAA
GAACGGGTAGAGCGGGGCGGCGCTCTGAAAGTCAATTGCATGATTGAGGA
TTTCTCAACGCCGATACCCAGTTCCCCATCACCGATGATCACAAGCGAAG
AAGCAAGAGTTCGAATCAAACCTTTTCGGAGATGCAACATTCCCTTCTCC
CACCCTCACTCACTCACGTTCACGAGCTCTTCAATAGCCAACGTGACCGA
TAGTGCCGTAGCTTCACTGCCAAATTCATCGTTGTGGTCACGCCCCCCCC
GCTCCCCCCCCCAACCACGTCATTCCGCGAAAATCCGTGGACGAACACGA
CACGATGACATGGCGCCGCTGCCGATCGATAAGGGCCACCGATGGGACTA
TCTGCAAGATGCAAATATGGGACACGGCGGGCCAGGAGCGGTTCCGCGCG
ATGGCGCCTCTGTACTACAGAAACGCGGCTGTGGCGGTGGTGTGCTTCGA
TATCATGGACGAGGAGTCGTTCCAGAAGATGAAGGACTGGGTAGCTGAGC
TCAGAACGAATGTTCCGGAAGGGAAGCTCGTCCTCGCCATCGCGTGTACG
AAGGTGCGTGTAATCCCCAAGGGTGTGCGTGCTTGCTCTCCTCTCGTCGC
GTCTGATGCGGTGCAAATGCGGCCGTATCGTGCACGTAGAAGCAGGACAA
TACATTCCTCCTCCACCTGGTTGTCGTAGACAGAAGCCGTACGTGTAAAT
GAGGGGCTAGGGAAAGCCCCGCACGAAAGCAGATACTTGAGTAACAGTCA
TGCTGCTGCTGCTGCTCTGTTTATCATGCACCGCTTGCAACTGTTTGCGC
GCCGTTCGGTTGATACCGTGGTTCGGCTGTGAGCGCTTATCCTCGTCACG
GAGTTCTTCCGTGAGCCAATCGCGTCGCCTCCTTTCCCGAAGCGTGCACG
TTACGAAAGAGCAGGGAAGTGACAAATCGTGTGTCGGAAGAAATAATGAC
AGAATGCACGTAGAAACAAGTATCGTCCGCGCGGGGCAAGGGCGGCCTTG
GTCTTGAATGAGGATGTTGAACATCCTTGAACGAGGATGTTGATCAATTC
TTGAACAAGGAAGGTAGTTATTCTTCTTCGTCGACTACCCCTCTCGCATG
AATTCAACAGCGAAACATGCGATTCAAACGTCCACCTGCGCAGTGGATTT
TTCTACGCTATTTGGATGCCGAATGGCCGACAGGGCTGTAGATTGTGATG
GTCTGGGGTTTGGGTGTTTATCACGTCTGCCTATTTGCTGAGCTCTGATC
CAGCTCGTGGCGTAGTTCTTTCCGTCACCGGCGCCATCTATTTCCGTCCT
AATCATGGAGTACGGAATGATCGTGGCTTGACGTTCTGCGGTAGCAGCGT
GCTTCCAACCTGCAAAGAGCAATGGCATCTTGTAAAACTACAGCCGAGCA
ATGAGTGGTAAAAGCGAACACTTTTAGGAACTACGGGATTCTGGGGCGCT
CACGGATTGATGCAACCCCTCCCCCCCGGCGGTGTCCCTTCCCTCCCGCG
CCGAACAACGAACACGCCGTGATAGACGGACATGGAGAGCAACAGAGTAG
TTTCACGAGCTCGCGCGGAGCAGTTCGCGACGGAGGTGGGGGGGATCCTG
TGCGAAACCAGCGCGAAGGAGAACTGGGGCGTTAACGAACTTTTCGCAAG
GGTGAGCTGATTGTTTTATGTCCCCCCCAGATCATCGGACTGCATGTCCG
GATGGCGGTGTATGTTCAGCATTAACCTGGCCCGCCGAAAAACTCGGAGG
TCCGAGATAGTGGCTACACCGGAATGGAGTTTGTTGCAGGAAGGGGGGGT
CGGTGTTACTACTCTGGCCTTTCAATGCCCTCTCGTGTGGAAGGTTCGGT
AAATGACTTCATTCGTCGTGTTAGCTTTGTTTAGCATCACCTTTGATACC
TTGGGTAATTTAGTCAGATTTTCATACTTGAAAGCGTGGAGCTCGTCGTG
GGGGGCTTTTGCCCCAAATTCTCCCCGGGTACATGCTGGTGTTGCGGGGT
CAACCACACACAATAGAATACAAACGTGGGGTACACTCGTGTGATAGTTT
CCCGGCGGCTTAAACCTGAAATTCATGAAGTTGTTCCGTGGAACAAACAT
TCTGTTCAACCCAGAGACAACATTCCACGCGTTGCGTGGTTGATAGGCCT
TGCTGCGTGAGATGTTCACACGACAATTTCGTCTTGTTTATCGTCGAAGG
AATAAATCTACGCGGTCCGGATTCACGTACGCAATATCCAGCCGTTACTT
GGTGGGCAAACATTTCGTACACTCACCTTTCCTGTTGGCATTTTCAAGTG
GTGAGATTGGCGCACATGAGATTGGCTCATGTCAGCACGTTGGTGTCGCG
ATATGGACAGCAGCGACCGCAAAAACGTGGGGGGGTGCGCCGTCTGTTTG
CTTCACCTCTATGACCGCACGCCTCATCCGACGTGTTCCTGAATGATACT
TATGCTCGGCAGGTTTGCGATCGTGCGATGGAGACCAGGGGGCCAGAACT
CCGAGGGGAGTTACCAGGGGGTACAGCGGGGGCAGGGGGGCGGAAGAGCA
AGTACAGCCTTTCTCCTGACGCAACCGCTGCGGGTTACGGAGGGGACAGT
GCCAGTGAAAGCTCGGGGGGCTGTTGTGGTTGACTCCCAATTTACGCTCA
GGAGCCTTTCTCGTGACCGCCAATCCAAAGTTTCACCCACTCCCGGCCCC
ATTCACGTCCCTGCAGCGAGTGTGCAAGGGGCTCGCTTTCCCCTGGCAAG
ACATGATGGCCCTTCGAAATAGCCGCGGGATCCTAGTCCTGCCACAGCGG
GAGCTCCGTTTCGGTTCTCATTGCAGACTAACGCCGTGGTGCCCTGTATC
TTAAAATTTTGTGAGAATTACCACACGATCGGCGTAAGTGCGTGGCCAGC
GGGTGGTCAGGGGAGTATTGGGTTTGAGTGGGAGGGAGGGCAGAGAGTAC
GAGAGCGAGGACGCGAGCCTCGATGCACGAAGCGAGTCTTTGGTCTCCCT
TTTCTAGTCGTCTTGCTGCCAGCAGCGCGAACGGGTCGGAGCGAATCGCC
GACCCCATCTTGTATGAAATAGCTACGCTATTCTTCATGCGGCCGTCCGT
CGGCGCATGGTCTACGGAGCGGGCGGATTCACCCCGTGAACCCAGACCCT
TGTTCACATGGCTGAAACCCGTTGATCAGTCAGAAGGCGGGCCGATGACA
TGGCCGTACCCTATGCCGCGGGTGTAAAAGGGAGCAGCAAGGGCTGTTGG
CATTTAGACAACCTCTTCCACTTTAGCGCGCGCGAATGAGCGTTGCGGGA
AGATTGGAATCCTTGCGGAAGCGCATGGCGACAAGGGGACCTGTTAGGAC
TCACATACGGCTCCCTATGCCTGACCCAAGGGATCTCTTTTTTTGCGTAG
CGGCCTAAGAGCTTTCCTCCCCCCATCACCCGTGTCACTTAGGTAAGTCT
GCACTCGCAGGGGGAAAGAATTTGCGAAATGTCTAATCCGTGTTTTCAAT
TCGGGGGGCACGCGTGTTTTCGGAGGGTTCGGGTACGACTTCTTTGTGCC
TTCTTGTGTAATCTATGCCGGACAGGGCTTCGTGCCACAGGTCGGATGAG
ACCCGGCCGTTTTAGCACGACCTGGGCTCTCGCTCGAGCCGACGAGGTGG
AGCGAGCGCCGTGTGTTTCCACTGGTTCTCTCCGACATTCGGTCACACTC
TTTTGTTGAAAGCTCGTTGTGCATCTCAAGAGGCAATGGCAGCTTTAGAC
TCGTTGACATTGAGCTGGTTTTGATCCCTGCACCTACTCCGCAGACGATG
AGCTGTGTGTGGTTCAGTTTTTTGTCCGTTTAGTTGTTTGTCAGTGGGGC
GAGCATCGCACTTCCCTCCGATCAAGTCATGAAAAGCAGAATCGAAGAAA
GACTTTGCTATCGACAGATCGGTACGGGGTCCTGTTTCTCATGCGCTTCA
ACGGCACCGTCGTGCGAAGATGTTCCAAGTTGCGCAGGACAGGCGGCGGC
GGCGGCGGCAGTCTTCGTGTGTTCACGACTAGAGAGAGGGTTGGAACGGC
GTATGGTGGAGGTTGTGGCAGCTTGGCAGGCGGTGCGGACGGGCCCGGGC
AACCACCATCCGCACGCCGTGTGGACATGTGTTCTACGTGGAAGCGCAAC
GTCCGGCAGACATTTTCCGCCAATCGATGTCCACCTCACTTGTCAAGCAA
TTTGGGTCGCAAATGCAGCGCGTGTCCGGAGACACCACCACTGAGGCTAG
CCTCGACGCTTAAAGCTTTGAGGGAGATGGGGACCAAGAGGGAATCGGAC
ATTTGCACCGTGCTACGATCGCT
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Coding sequence (CDS) from alignment at P-fluviatile_contig13:2135875..2141647-

>mRNA_P-fluviatile_contig13.1845.1 ID=mRNA_P-fluviatile_contig13.1845.1|Name=mRNA_P-fluviatile_contig13.1845.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1362bp|location=Sequence derived from alignment at P-fluviatile_contig13:2135875..2141647- (Porterinema fluviatile SAG_2381)
ATGGCTGAGCCTGTGGCTCCGAAAACGTCGGTGGAGTTCAAGATGGCTGA
GCCTGTGGCTCCGAAAACGTCGGTGGAGTTCAAGGTGGTGGTCCTGGGGG
ATAAGGGAGTCGGGAAGACCTGCCTGGTGCTGCGGTTCATAGAGGGGTAC
TTCGCGCCCAAGCAGCAGAGCACCATCGGGGCCTTCTTCCTGACGAAGCA
AATTACGTGGTGGTCCTGGGGGATAAGGGAGTCGGGAAGACCTGCCTGGT
GCTGCGGTTCATAGAGGGGTACTTCGCGCCCAAGCAGCAGAGCACCATCG
GGGCCTTCTTCCTGACGAAGCAAATTACGGCCACCGATGGGACTATCTGC
AAGATGCAAATATGGGACACGGCGGGCCAGGAGCGGTTCCGCGCGATGGC
GCCTCTGTACTACAGAAACGCGGCTGTGGCGGTGGTGTGCTTCGATATCA
TGGACGAGGAGTCGTTCCAGAAGATGAAGGACTGGGTAGCTGAGCTCAGA
ACGAATGTTCCGGAAGGGAAGCTCGTCCTCGCCATCGCGTGTACGAAGGG
CCACCGATGGGACTATCTGCAAGATGCAAATATGGGACACGGCGGGCCAG
GAGCGGTTCCGCGCGATGGCGCCTCTGTACTACAGAAACGCGGCTGTGGC
GGTGGTGTGCTTCGATATCATGGACGAGGAGTCGTTCCAGAAGATGAAGG
ACTGGGTAGCTGAGCTCAGAACGAATGTTCCGGAAGGGAAGCTCGTCCTC
GCCATCGCGTGTACGAAGACGGACATGGAGAGCAACAGAGTAGTTTCACG
AGCTCGCGCGGAGCAGTTCGCGACGGAGGTGGGGGGGATCCTGTGCGAAA
CCAGCGCGAAGGAGAACTGGGGCGTTAACGAACTTTTCGCAAGGACGGAC
ATGGAGAGCAACAGAGTAGTTTCACGAGCTCGCGCGGAGCAGTTCGCGAC
GGAGGTGGGGGGGATCCTGTGCGAAACCAGCGCGAAGGAGAACTGGGGCG
TTAACGAACTTTTCGCAAGGGTTTGCGATCGTGCGATGGAGACCAGGGGG
CCAGAACTCCGAGGGGAGTTACCAGGGGGTACAGCGGGGGCAGGGGGGCG
GAAGAGCAAGTACAGCCTTTCTCCTGACGCAACCGCTGCGGGTTACGGAG
GGGACAGTGCCAGTGAAAGCTCGGGGGGCTGTTGTGGTTGAGTTTGCGAT
CGTGCGATGGAGACCAGGGGGCCAGAACTCCGAGGGGAGTTACCAGGGGG
TACAGCGGGGGCAGGGGGGCGGAAGAGCAAGTACAGCCTTTCTCCTGACG
CAACCGCTGCGGGTTACGGAGGGGACAGTGCCAGTGAAAGCTCGGGGGGC
TGTTGTGGTTGA
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