mRNA_P-fluviatile_contig13.1819.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig13.1819.1 vs. uniprot
Match: D8LRQ1_ECTSI (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRQ1_ECTSI) HSP 1 Score: 712 bits (1838), Expect = 9.370e-234 Identity = 664/1195 (55.56%), Postives = 766/1195 (64.10%), Query Frame = 1
Query: 28 RACTLLACGWSFQRWGCTDGFAGGAWRSWSRESTAATKAVTSATSS--STRPSCAAGQGRLSSTPLECVPASRNVFPGDCRRXXXXXXXXXXGFGPTVACSSRTGVASTLEVQENGGEDTK-VGGAAWVDGNDDFDARVAAVGDDGGGGHGDVNRKGRGKQQQRKPMSNNVSRNKLFDLLNDLEGGGGGGLEALDLLGIGXXXXXXXXXXXXXXXXXXVLPGDG--HHLTPHGETTVADLPAVGGQHQGDEEGQGAEAGAQEGRGLAPPLELPKRTARGKYISR----MPPLTKSQSEEWRVLPMVEKIQEL--CRTKRSDPKGQQSWREVMKVLAEVKEEHGERGLGLTFIYGLAMRACMDFGHPEEALRLFHEVKGFKDSPPNRQIFDVAIVAHCQLRQRDEAMGMMLEMKESGWEPTELAYVQLLKTIRGTEGASAVADRVLRLYGEDGEDEDLGGTHVKMHTHAETVSSGXXXXXXXXXXXXXXXXXXXXXXXXSLKVCHQYLMVLQRDDQWEQALGFLTRLVERGRPAPDQECYDPVLLALNRAERWQETARVMDLFRL--------QEFVDKPLRRVYLTALSTMIRVAKRDTV-----EEESQAAMEETIKLWKEFLGWGLFDGIRPQSAGQLLHSMFNACDKHEKHWPTAVEVFDMIEQYEYEFDDS--------RTAYW---GTGAAXXXXXXXXXDEVRPSANEYGSMLHILSKTKDVDRGANWQRSMELLREAQENEMPVSEGSYLTVITDLGFAGQVDLAFSLYDDMRMAGIPPSVIIYNRLLGVCEKNKEWERSLAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHYTTCIDTANRMEVTGMGWELWRQMGVKGVEPNNYAYSAIMTTAAIDRDVRTALRLLEEMKTKGMDIDVVSYTSAICACGPDWLLAXXXXXXXXXXXXXXXXXXXXXXXXXXFKGEEPREVIDVXXXXXXXXXXXXXXXXXLAMMAHDADGNHYGRVALEAELTEAGLSLQDKEWETAWEPPLEFGGGFSEIGEASYDVGPP--VGXXXXXXXXXXX---YGQFEDYHEEG 3492
RACTLLACG S Q W CTDGFAG AWRS S + KA +AT + + P+ AA G P V ASR+ CRR G T+ACS RT ASTL+VQENGG DT+ +G A W DG + A G G + + R K+++RKP++ N RNKLFDLLNDLEGGGGGGLEA++LLG+ +L G H+ H Q L P++ + G+ SR +PPLT+SQSEEWRVLPM E+IQE+ + K+ DP ++ EVM++L +VKEEHGERGLGLTFIY L MR C+DFG PE+ + LF E+K FK+SPPNRQ F+ A +AH QL+Q D AM ++LEMKESGW PTE AY LL+TIRGTEGASAVA+RV++LY ED ED + GG + S+ +CHQYLMVL ++WEQAL F +LVERG+P PDQ CY+ L ALNR+ERW+ET RVM+ FR Q KP+R ++L+ALST++RVAKR E+ES+AAM+E IK+WKE G+++GI P SAG+LLH +FNACDKH K+WPTA+EVFD++E YEY D S + + W G + D P+A EY SMLHILS ++D +RGANW+RSMELLREAQENE+P+SE S+ TV+TDLGFAG+VDLAFS+YDDMRMAGIPPS+ YNRLLGVCEKNKEW XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IDVVSYTSAICACGPDWLLAXXXXXXXXXXXXXXXXXXXXXXXXXXFKGEEPREVI+V LA+MAHDAD NHYGR +LEAELTEAGLSLQDKEWETAW PP + GG FSEIGE YDVGPP G YGQFEDY G
Sbjct: 3 RACTLLACGVSLQSWVCTDGFAGNAWRS----SPSGNKAEKTATHTCVAAPPAEAATAGWQQRRPAARVLASRS----SCRRVS----------GATIACS-RTESASTLQVQENGGGDTQQLGDAPWEDGEGAAADEIEAAGAGGASTPSGTDEEDRSKRRKRKPVTANGGRNKLFDLLNDLEGGGGGGLEAIELLGV-----EKTAHGVGGSSSSMLLEGAAGQEHVVDHVALPPXXXXXXXXXXXXXXXXQEL-------------LSEPRKKSAGRKFSRRQGRVPPLTRSQSEEWRVLPMAERIQEIRHSKMKKKDPMKEEKCMEVMQMLDKVKEEHGERGLGLTFIYSLGMRTCLDFGQPEKVIALFSELKTFKESPPNRQAFEAASIAHSQLKQGDAAMEVILEMKESGWLPTERAYKTLLETIRGTEGASAVANRVIQLYVED-EDPEGGGAGL---------------------------------LPTSMDLCHQYLMVLAWANEWEQALEFFFKLVERGQPHPDQNCYNAALHALNRSERWEETIRVMEAFRSHVRLMQHQQLEAPKPMRSLFLSALSTLLRVAKRTEGVEGYDEQESEAAMDEAIKVWKELKASGMYEGISPYSAGRLLHPLFNACDKHAKYWPTALEVFDLMESYEYSPDKSDDRWRDEEKASGWRGGDGGISADERMAKEEDRTAPTAGEYRSMLHILSHSRDAERGANWERSMELLREAQENELPISESSFQTVMTDLGFAGEVDLAFSIYDDMRMAGIPPSLDTYNRLLGVCEKNKEWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIDVVSYTSAICACGPDWLLAXXXXXXXXXXXXXXXXXXXXXXXXXXFKGEEPREVINVFNRMKAAGVAPDLRAYNLAIMAHDADENHYGRASLEAELTEAGLSLQDKEWETAWVPPPDLGGAFSEIGEPGYDVGPPRKAGGGRWGDQGSGGGSSYGQFEDYEGGG 1126 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1819.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig13.1819.1 >prot_P-fluviatile_contig13.1819.1 ID=prot_P-fluviatile_contig13.1819.1|Name=mRNA_P-fluviatile_contig13.1819.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1009bp MSNNVSRNKLFDLLNDLEGGGGGGLEALDLLGIGGSSNNNNNNNNNNNNNback to top mRNA from alignment at P-fluviatile_contig13:1924773..1936995+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig13.1819.1 ID=mRNA_P-fluviatile_contig13.1819.1|Name=mRNA_P-fluviatile_contig13.1819.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=12223bp|location=Sequence derived from alignment at P-fluviatile_contig13:1924773..1936995+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig13:1924773..1936995+ >mRNA_P-fluviatile_contig13.1819.1 ID=mRNA_P-fluviatile_contig13.1819.1|Name=mRNA_P-fluviatile_contig13.1819.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=6054bp|location=Sequence derived from alignment at P-fluviatile_contig13:1924773..1936995+ (Porterinema fluviatile SAG_2381)back to top |