prot_P-fluviatile_contig13.1819.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig13.1819.1
Unique Nameprot_P-fluviatile_contig13.1819.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length1009
Homology
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BLAST of mRNA_P-fluviatile_contig13.1819.1 vs. uniprot
Match: D8LRQ1_ECTSI (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRQ1_ECTSI)

HSP 1 Score: 631 bits (1628), Expect = 2.760e-206
Identity = 592/1026 (57.70%), Postives = 676/1026 (65.89%), Query Frame = 0 
Query:    4 NVSRNKLFDLLNDLEGGGGGGLEALDLLGIGXXXXXXXXXXXXXXXXXXVLPGDG--HHLTPHGETTVADLPAVGGQHQGDEEGQGAEAGAQEGRGLAPPLELPKRTARGKYISR----MPPLTKSQSEEWRVLPMVEKIQEL--CRTKRSDPKGQQSWREVMKVLAEVKEEHGERGLGLTFIYGLAMRACMDFGHPEEALRLFHEVKGFKDSPPNRQIFDVAIVAHCQLRQRDEAMGMMLEMKESGWEPTELAYVQLLKTIRGTEGASAVADRVLRLYGEDGEDEDLGGTHVKMHTHAETVSSGXXXXXXXXXXXXXXXXXXXXXXXXSLKVCHQYLMVLQRDDQWEQALGFLTRLVERGRPAPDQECYDPVLLALNRAERWQETARVMDLFRL--------QEFVDKPLRRVYLTALSTMIRVAKRDTV-----EEESQAAMEETIKLWKEFLGWGLFDGIRPQSAGQLLHSMFNACDKHEKHWPTAVEVFDMIEQYEYEFDDS--------RTAYW---GTGAAXXXXXXXXXDEVRPSANEYGSMLHILSKTKDVDRGANWQRSMELLREAQENEMPVSEGSYLTVITDLGFAGQVDLAFSLYDDMRMAGIPPSVIIYNRLLGVCEKNKEWERSLAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHYTTCIDTANRMEVTGMGWELWRQMGVKGVEPNNYAYSAIMTTAAIDRDVRTALRLLEEMKTKGMDIDVVSYTSAICACGPDWLLAXXXXXXXXXXXXXXXXXXXXXXXXXXFKGEEPREVIDVXXXXXXXXXXXXXXXXXLAMMAHDADGNHYGRVALEAELTEAGLSLQDKEWETAWEPPLEFGGGFSEIGEASYDVGPP--VGXXXXXXXXXXX---YGQFEDYHEEG 992
            N  RNKLFDLLNDLEGGGGGGLEA++LLG+                   +L G     H+  H                     Q               L  P++ + G+  SR    +PPLT+SQSEEWRVLPM E+IQE+   + K+ DP  ++   EVM++L +VKEEHGERGLGLTFIY L MR C+DFG PE+ + LF E+K FK+SPPNRQ F+ A +AH QL+Q D AM ++LEMKESGW PTE AY  LL+TIRGTEGASAVA+RV++LY ED ED + GG  +                                    S+ +CHQYLMVL   ++WEQAL F  +LVERG+P PDQ CY+  L ALNR+ERW+ET RVM+ FR         Q    KP+R ++L+ALST++RVAKR        E+ES+AAM+E IK+WKE    G+++GI P SAG+LLH +FNACDKH K+WPTA+EVFD++E YEY  D S        + + W     G +         D   P+A EY SMLHILS ++D +RGANW+RSMELLREAQENE+P+SE S+ TV+TDLGFAG+VDLAFS+YDDMRMAGIPPS+  YNRLLGVCEKNKEW      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                  IDVVSYTSAICACGPDWLLAXXXXXXXXXXXXXXXXXXXXXXXXXXFKGEEPREVI+V                 LA+MAHDAD NHYGR +LEAELTEAGLSLQDKEWETAW PP + GG FSEIGE  YDVGPP   G              YGQFEDY   G
Sbjct:  153 NGGRNKLFDLLNDLEGGGGGGLEAIELLGV-----EKTAHGVGGSSSSMLLEGAAGQEHVVDHVALPPXXXXXXXXXXXXXXXXQEL-------------LSEPRKKSAGRKFSRRQGRVPPLTRSQSEEWRVLPMAERIQEIRHSKMKKKDPMKEEKCMEVMQMLDKVKEEHGERGLGLTFIYSLGMRTCLDFGQPEKVIALFSELKTFKESPPNRQAFEAASIAHSQLKQGDAAMEVILEMKESGWLPTERAYKTLLETIRGTEGASAVANRVIQLYVED-EDPEGGGAGL---------------------------------LPTSMDLCHQYLMVLAWANEWEQALEFFFKLVERGQPHPDQNCYNAALHALNRSERWEETIRVMEAFRSHVRLMQHQQLEAPKPMRSLFLSALSTLLRVAKRTEGVEGYDEQESEAAMDEAIKVWKELKASGMYEGISPYSAGRLLHPLFNACDKHAKYWPTALEVFDLMESYEYSPDKSDDRWRDEEKASGWRGGDGGISADERMAKEEDRTAPTAGEYRSMLHILSHSRDAERGANWERSMELLREAQENELPISESSFQTVMTDLGFAGEVDLAFSIYDDMRMAGIPPSLDTYNRLLGVCEKNKEWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIDVVSYTSAICACGPDWLLAXXXXXXXXXXXXXXXXXXXXXXXXXXFKGEEPREVINVFNRMKAAGVAPDLRAYNLAIMAHDADENHYGRASLEAELTEAGLSLQDKEWETAWVPPPDLGGAFSEIGEPGYDVGPPRKAGGGRWGDQGSGGGSSYGQFEDYEGGG 1126
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1819.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRQ1_ECTSI2.760e-20657.70Uncharacterized protein (Fragment) n=2 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 693..740
e-value: 5.6E-10
score: 39.3
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 787..846
e-value: 5.7E-6
score: 26.3
coord: 855..910
e-value: 5.1E-8
score: 32.9
coord: 576..637
e-value: 4.5E-11
score: 42.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 218..247
e-value: 0.0024
score: 15.9
coord: 626..659
e-value: 0.0015
score: 16.6
coord: 696..730
e-value: 3.8E-6
score: 24.7
coord: 870..902
e-value: 2.1E-5
score: 22.4
coord: 592..625
e-value: 5.0E-5
score: 21.2
coord: 662..694
e-value: 7.2E-4
score: 17.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 178..204
e-value: 0.29
score: 11.5
coord: 219..242
e-value: 0.47
score: 10.8
coord: 662..686
e-value: 1.1
score: 9.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 554..588
score: 9.284
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 211..245
score: 9.35
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 694..728
score: 11.718
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 867..901
score: 10.008
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 361..395
score: 5.437
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 325..359
score: 5.492
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 175..209
score: 7.772
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 764..798
score: 6.818
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 589..623
score: 10.797
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 659..693
score: 9.405
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 624..658
score: 9.679
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 840..866
score: 5.47
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 729..763
score: 9.514
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 799..833
score: 8.385
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 136..315
e-value: 6.0E-14
score: 54.1
coord: 601..757
e-value: 4.6E-43
score: 149.7
coord: 814..945
e-value: 1.3E-24
score: 89.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 323..600
e-value: 5.8E-14
score: 53.8
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 338..597
coord: 176..255
coord: 843..935
coord: 582..740
coord: 728..843

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:1925289..1936633 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1819.1mRNA_P-fluviatile_contig13.1819.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig13 1924773..1936995 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig13.1819.1 ID=prot_P-fluviatile_contig13.1819.1|Name=mRNA_P-fluviatile_contig13.1819.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1009bp
MSNNVSRNKLFDLLNDLEGGGGGGLEALDLLGIGGSSNNNNNNNNNNNNN
NNVLPGDGHHLTPHGETTVADLPAVGGQHQGDEEGQGAEAGAQEGRGLAP
PLELPKRTARGKYISRMPPLTKSQSEEWRVLPMVEKIQELCRTKRSDPKG
QQSWREVMKVLAEVKEEHGERGLGLTFIYGLAMRACMDFGHPEEALRLFH
EVKGFKDSPPNRQIFDVAIVAHCQLRQRDEAMGMMLEMKESGWEPTELAY
VQLLKTIRGTEGASAVADRVLRLYGEDGEDEDLGGTHVKMHTHAETVSSG
RGGGGAAGSGAVEAEAPLPLPLPMSLKVCHQYLMVLQRDDQWEQALGFLT
RLVERGRPAPDQECYDPVLLALNRAERWQETARVMDLFRLQEFVDKPLRR
VYLTALSTMIRVAKRDTVEEESQAAMEETIKLWKEFLGWGLFDGIRPQSA
GQLLHSMFNACDKHEKHWPTAVEVFDMIEQYEYEFDDSRTAYWGTGAAAA
SAAQEEEDEVRPSANEYGSMLHILSKTKDVDRGANWQRSMELLREAQENE
MPVSEGSYLTVITDLGFAGQVDLAFSLYDDMRMAGIPPSVIIYNRLLGVC
EKNKEWERSLAILDEMKELGLKPDIVSYGAAISTCGKGLEWRRALALLVR
MQHDGIEPNLKCFNAVIHGLGLAGEWKRAEAIMEVIHKTGLLPDGYSYNS
IAMAYASAGESDRALDVLETMQQNGVEPDEVTYGTLMKACEGEGAFSIMR
SLMDEMDQRGIPMTVNHYTTCIDTANRMEVTGMGWELWRQMGVKGVEPNN
YAYSAIMTTAAIDRDVRTALRLLEEMKTKGMDIDVVSYTSAICACGPDWL
LALDVLDDMAKDGVEPNLLSYTAAMGACFKGEEPREVIDVFNRMKAAGVA
PDLRAYNLAMMAHDADGNHYGRVALEAELTEAGLSLQDKEWETAWEPPLE
FGGGFSEIGEASYDVGPPVGGGGAGRRGGGGYGQFEDYHEEGGGGGYGYE
SGDSYSKW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf