prot_P-fluviatile_contig9.15254.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig9.15254.1
Unique Name	prot_P-fluviatile_contig9.15254.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	167

Homology

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BLAST of mRNA_P-fluviatile_contig9.15254.1 vs. uniprot
Match: D7G8H7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8H7_ECTSI)

HSP 1 Score: 196 bits (499), Expect = 1.280e-61
Identity = 109/166 (65.66%), Postives = 124/166 (74.70%), Query Frame = 0

Query:    1 MDNPLQPTCWAGMQAMGTLFGTMFGFVSAALMTPVGDGDREAGMPAAPGVIVGSSLGVLAAHSAGEGNQPLRHMAYFLVLGVAAAAATTAVCGGLVGGILNKGGSAGIMVLATVASLGSTAAFALLKHNILLARADAGADISNGCGHDALPRTDADRTPLMDLKEV 166
            MD+ LQPTCWAGMQAMGTL GTMFGFVSAAL+TP+  G+RE G+PAAPGVI+GSSLGVLAA+SAGEG QPLR + Y L+L V AAA TTA C  L G +L  GGS GIMVLATVASLGSTA F + KHN+LL RA   A   +   H+ LP    +   LMDLK V
Sbjct:    1 MDDLLQPTCWAGMQAMGTLLGTMFGFVSAALLTPIDGGEREHGLPAAPGVIMGSSLGVLAAYSAGEGTQPLRQLLYLLLLSVGAAAVTTAACSWLTGDVLQNGGSVGIMVLATVASLGSTAVFTIDKHNMLLTRAATAAAFDDRERHEGLPHLQEES--LMDLKAV 164

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig9.15254.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig9.15254.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G8H7_ECTSI	1.280e-61	65.66	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..32
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 44..64
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 127..166
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 76..100
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 106..126
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 65..75
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 33..43
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 101..105
None	No IPR available	TMHMM	TMhelix		coord: 10..32
None	No IPR available	TMHMM	TMhelix		coord: 104..126
None	No IPR available	TMHMM	TMhelix		coord: 77..99

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig9	contig	P-fluviatile_contig9:2299656..2302480 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig9.15254.1	mRNA_P-fluviatile_contig9.15254.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig9 2298897..2302480 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig9.15254.1 ID=prot_P-fluviatile_contig9.15254.1|Name=mRNA_P-fluviatile_contig9.15254.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=167bp
MDNPLQPTCWAGMQAMGTLFGTMFGFVSAALMTPVGDGDREAGMPAAPGV
IVGSSLGVLAAHSAGEGNQPLRHMAYFLVLGVAAAAATTAVCGGLVGGIL
NKGGSAGIMVLATVASLGSTAAFALLKHNILLARADAGADISNGCGHDAL
PRTDADRTPLMDLKEV*