prot_P-fluviatile_contig1.43.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig1.43.1
Unique Nameprot_P-fluviatile_contig1.43.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length188
Homology
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BLAST of mRNA_P-fluviatile_contig1.43.1 vs. uniprot
Match: D8LE04_ECTSI (Tubulin delta chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE04_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 2.170e-23
Identity = 72/151 (47.68%), Postives = 81/151 (53.64%), Query Frame = 0 
Query:    1 MSVITVQVGQCGNQIGASLFHALYEHADQPGAAAG---GAEAEXXXXXXXXXXXXXXXXXXXXXXXXXRTVIVDTEPKVIQRIVA-------SCGGGASNPRGG---------ERRHPPLGRSNGTSGGRNSGDTGWRYDSGTQVCCHAQG 132
            MSV+TVQVGQCGNQ+GASLF AL++HA QP A  G   G E+E                         R VI+DTEPKVIQRIVA       S G GA    GG         +RR    G  N ++ G  S   GWRYDSGTQVCCHAQG
Sbjct:   37 MSVVTVQVGQCGNQLGASLFQALHDHASQPPAHHGHTSGTESERARSACRQSFFRDGGVA--------RAVIIDTEPKVIQRIVATRGRAEESTGAGARRAAGGRESAYGKTAQRRTNTTGDRNHSTVGGGSRGGGWRYDSGTQVCCHAQG 179
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.43.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LE04_ECTSI2.170e-2347.68Tubulin delta chain n=1 Tax=Ectocarpus siliculosus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036525Tubulin/FtsZ, GTPase domain superfamilyGENE3D3.40.50.1440coord: 1..102
e-value: 9.7E-16
score: 60.0
IPR036525Tubulin/FtsZ, GTPase domain superfamilySUPERFAMILY52490Tubulin nucleotide-binding domain-likecoord: 1..92
IPR003008Tubulin/FtsZ, GTPase domainPFAMPF00091Tubulincoord: 3..83
e-value: 2.5E-10
score: 40.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:734524..736187 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.43.1mRNA_P-fluviatile_contig1.43.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig1 733511..740974 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig1.43.1 ID=prot_P-fluviatile_contig1.43.1|Name=mRNA_P-fluviatile_contig1.43.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=188bp
MSVITVQVGQCGNQIGASLFHALYEHADQPGAAAGGAEAERERAACRRSF
FRDDDGGGGGGCVVARTVIVDTEPKVIQRIVASCGGGASNPRGGERRHPP
LGRSNGTSGGRNSGDTGWRYDSGTQVCCHAQGVRRTIGPTDTTPTGPPSR
KRASKGFGGRPKGATAWRGFASFTAWRGARDPAWGRV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036525Tubulin/FtsZ_GTPase_sf
IPR003008Tubulin_FtsZ_GTPase