mRNA_P-fluviatile_contig1.43.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.43.1 vs. uniprot
Match: D8LE04_ECTSI (Tubulin delta chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE04_ECTSI) HSP 1 Score: 304 bits (778), Expect = 3.870e-91 Identity = 186/274 (67.88%), Postives = 195/274 (71.17%), Query Frame = 2
Query: 1406 GGAANNWAYGYHAHGATFTEACLEGVRRETERCDRLAGFCVLHSLAGGTGSGLGTCLTEALRDELPSAFLLNTVVCAHSSGEVILQNYNTLFTLSKLAKCSDGVLVVENEAATAVCRKLLRLERPSHAHLNKVICTSLVAALAPTSAAAAVEGAETRHGGVHDXXXXXXXXXXXXXXXXXXXXXXXXXXXHLCPNKDFVFLTASMVPQIPDSSRAFTSNTWEALTRRAYQMQVTGALADFELDWRKKASYGAGAGVGLNQSVASLLTFHGATCG 2227
GGAANNWAYGYHAHGATF+EACLEGVRRETERCDRL G C+LHSLAGGTGSGLGTCLTEALRDELPSAFLLNTVV AHSSGEVILQNYNTLFTLSKLAKCSDGVLVVEN+AATAVCRKLLRLERPSH LN+VIC+SLVAAL PT+ XXXXXXXXXXXXXXX HLCPNKDFVFL AS+VPQ S AF + E + GVGLNQSVASLLTFHG G
Sbjct: 179 GGAANNWAYGYHAHGATFSEACLEGVRRETERCDRLTGLCILHSLAGGTGSGLGTCLTEALRDELPSAFLLNTVVGAHSSGEVILQNYNTLFTLSKLAKCSDGVLVVENDAATAVCRKLLRLERPSHTDLNEVICSSLVAALTPTTX-------XXXXXXXXXXXXXXXXXXXXXXXXGGMLLHLGDKLAHLCPNKDFVFLRASIVPQ---ESTAFEGSRGERI------------------------------GVGLNQSVASLLTFHGTPVG 412
BLAST of mRNA_P-fluviatile_contig1.43.1 vs. uniprot
Match: W4GTD2_9STRA (Tubulin delta chain n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GTD2_9STRA) HSP 1 Score: 187 bits (474), Expect = 1.870e-48 Identity = 108/288 (37.50%), Postives = 153/288 (53.12%), Query Frame = 2
Query: 1361 GLEIRQRDAGLLPRTGGAANNWAYGYHAHGATFTEACLEGVRRETERCDRLAGFCVLHSLAGGTGSGLGTCLTEALRDELPSAFLLNTVVCAHSSGEVILQNYNTLFTLSKLAKCSDGVLVVENEAATAVCRKLLRLERPSHAHLNKVICTSLVAALAPTSAAAAVEGAETRHGGVHDXXXXXXXXXXXXXXXXXXXXXXXXXXXHLCPNKDFVFLTASMVPQIPDSSRAFTSNTWEALTRRAYQMQVTGALADFELDWRKKASYGAGAGVGLNQSVASLLTFHGATC 2224
GL + DA ++ G+ NNWAYGY HGA EA L+ VR+E ERCD GF L SLAGGTGSGLG+ + ++LR+ P+++LLNTVV + SGEVI+QNYNTL T++ L++ SDGVL+VEN+ A +CR+LL + PS +N+V+ + A L P A+ + H HLC + F L +VPQ+ SR F+ + W + + +QM + + D + W G +N+SVAS+L G C
Sbjct: 83 GLPWQYDDANVVCEQSGSGNNWAYGYAVHGAACHEAVLDVVRKEVERCDYFKGFLALQSLAGGTGSGLGSFVCDSLRELYPTSYLLNTVVWPYRSGEVIVQNYNTLLTMACLSESSDGVLIVENDLADQICRRLLAIPTPSFHQMNQVLTNHIAAMLMP-----ALPFQKDTH------------------TSRFSSCALPSIIQHLCAHPGFKLLNVKLVPQLAQRSRDFSVHQWPGVLKHLHQMHIANSGMDEGVRWDVSLENGP-----INKSVASMLFVRGPHC 342
BLAST of mRNA_P-fluviatile_contig1.43.1 vs. uniprot
Match: D8TV44_VOLCA (Tubulin delta chain n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TV44_VOLCA) HSP 1 Score: 183 bits (465), Expect = 3.510e-47 Identity = 109/290 (37.59%), Postives = 152/290 (52.41%), Query Frame = 2
Query: 1385 AGLLPRTGGAANNWAYGYHAHGATFTEACLEGVRRETERCDRLAGFCVLHSLAGGTGSGLGTCLTEALRDELPSAFLLNTVVCAHSSGEVILQNYNTLFTLSKLAKCSDGVLVVENEAATAVCRKLLRLERPSHAHLNKVICTSLVAALAPTSAAAAVEGAETRHGGVHDXXXXXXXXXXXXXXXXXXXXXXXXXXXHLCPNKDFVFLTASMVPQIPDSSRAFTSNTWEALTRRAYQMQVTGALADFELDWRKKASYGAGA-GVG--------LNQSVASLLTFHGATCG 2227
+G L G+ NNWA G+H +G EA LE VRRE E D L GF +L S+AGGTG+GLGT + +ALRDE SAF+ N V + SGEVI+Q YNTLFTLS L+ SDG++++ENEA C +L+ + RPS A +N + ++ + L P+ + T LCP+ + LT +PQ+P +S FT+ TW A+ +R QM VTG++ + +DW AGA G G +N++VA+ L G G
Sbjct: 84 SGYLVMQSGSGNNWAQGFHGYGPRVHEAALELVRREVEAADSLTGFLLLQSMAGGTGAGLGTYVAQALRDEYHSAFITNCCVWPYESGEVIVQPYNTLFTLSHLSDLSDGIVLLENEALHLTCARLMGIPRPSFADMNGIAARAMASVLLPSRLRGPTNSSTTS--------------------------PLADLVTQLCPHPAYRMLTLRAIPQLPPASIDFTTFTWPAILKRLRQMLVTGSVLEEGMDWSINPHSPAGARGTGATCGSSPRVNRAVANWLVLRGQGAG 347
BLAST of mRNA_P-fluviatile_contig1.43.1 vs. uniprot
Match: A0A5D6YTS6_9STRA (Tubulin delta chain n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YTS6_9STRA) HSP 1 Score: 182 bits (461), Expect = 1.120e-46 Identity = 109/296 (36.82%), Postives = 153/296 (51.69%), Query Frame = 2
Query: 1355 RHGLEIRQRDAGLLPRTGGAANNWAYGYHAHGATFTEACLEGVR---------RETERCDRLAGFCVLHSLAGGTGSGLGTCLTEALRDELPSAFLLNTVVCAHSSGEVILQNYNTLFTLSKLAKCSDGVLVVENEAATAVCRKLLRLERPSHAHLNKVICTSLVAALAPTSAAAAVEGAETRHGGVHDXXXXXXXXXXXXXXXXXXXXXXXXXXXHLCPNKDFVFLTASMVPQIPDSSRAFTSNTWEALTRRAYQMQVTGALADFELDWRKKASYGAGAGVGLNQSVASLLTFHG 2215
R G R A + G+ NNWA+GY AHGA A L+ V+ +E ERCD GF L S+AGGTGSGLG+ LTE L D PSA LLN VV ++SGEVI+QNYNT+ T+++LA + GV V++N+AA+A+C++LLR+ RPS +N V+ T L +AL P ++ V LC + + L +PQ+P S+ F+++TW + + +QMQV A + +DW S G N +VAS+L G
Sbjct: 78 RRGARWRYDGANTFMQQSGSGNNWAFGYAAHGAQHEAALLDLVQALTLAAPSAQELERCDLHRGFFTLQSVAGGTGSGLGSFLTELLADHFPSARLLNAVVWPYASGEVIVQNYNTVLTMARLAAAAHGVFVLQNDAASAMCQQLLRIARPSFREINDVLATHLASALLPVASCEPVR----------------------------------EICQELCQHPGYKLLDIKTIPQMPHRSKEFSTHTWTGILKHLHQMQVANAPLEEGIDW--DVSLATAEGRARNTAVASVLLLRG 337
BLAST of mRNA_P-fluviatile_contig1.43.1 vs. uniprot
Match: A0A6G0XD18_9STRA (Tubulin delta chain n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XD18_9STRA) HSP 1 Score: 178 bits (452), Expect = 1.220e-45 Identity = 95/269 (35.32%), Postives = 146/269 (54.28%), Query Frame = 2
Query: 1409 GAANNWAYGYHAHGATFTEACLEGVRRETERCDRLAGFCVLHSLAGGTGSGLGTCLTEALRDELPSAFLLNTVVCAHSSGEVILQNYNTLFTLSKLAKCSDGVLVVENEAATAVCRKLLRLERPSHAHLNKVICTSLVAALAPTSAAAAVEGAETRHGGVHDXXXXXXXXXXXXXXXXXXXXXXXXXXXHLCPNKDFVFLTASMVPQIPDSSRAFTSNTWEALTRRAYQMQVTGALADFELDWRKKASYGAGAGVGLNQSVASLLTFHG 2215
G+ NNWAYGY HG++ E+ + VR+E E+CD GF L SLAGGTGSGLG+ + + LR+ PS++LLNTVV + SGEVI+QNYNTL T++ L++ SDG++++EN+ A +CR+LL + +PS +N+V+ + A L P +T H HLC + + L ++P + SR F+ + W + + +QMQ+ A D + W S G+ +N+S+A++L G
Sbjct: 93 GSGNNWAYGYAVHGSSCAESVTDIVRKEVEKCDYFKGFVALQSLAGGTGSGLGSFVCDVLREHYPSSYLLNTVVWPYRSGEVIVQNYNTLLTMACLSESSDGIMILENDLADQICRRLLAISKPSFGAMNQVLANHMAAVLLPAQPLQ-----KTTHS------------------TRFTSCLLPTVMQHLCSHPGYKLLNVKLLPHLAQRSRDFSVHQWPGVLKHLHQMQIANAGMDEGVRWDVSLS---GSSHHINKSIAAMLFLRG 335
BLAST of mRNA_P-fluviatile_contig1.43.1 vs. uniprot
Match: A0A1Y1HU41_KLENI (Tubulin delta chain n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HU41_KLENI) HSP 1 Score: 179 bits (453), Expect = 1.650e-45 Identity = 110/283 (38.87%), Postives = 146/283 (51.59%), Query Frame = 2
Query: 1391 LLPRTGGAANNWAYGYHAHGATFTEACLEGVRRETERCDRLAGFCVLHSLAGGTGSGLGTCLTEALRDELPSAFLLNTVVCAHSSGEVILQNYNTLFTLSKLAKCSDGVLVVENEAATAVCRKLLRLERPSHAHLNKVICTSLVAALAPT---SAAAAVEGAETRHGGVHDXXXXXXXXXXXXXXXXXXXXXXXXXXXHLCPNKDFVFLTASMVPQIPDSSRAFTSNTWEALTRRAYQMQVTGALADFELDWRKKASYG-----AGAGVGLNQSVASLLTFHG 2215
L R G+ NNWA G+H HG + L VR+E E CDR GF L S+AGGTGSGLG LRDE P++ LL V H SGEVI+Q+YN + TL KLA+ +DGV++VENEA TA CR+LL + RPS+ LN V +L L P S A +V R + D +C + + L+ +PQIP +S FT+ TW +L R+ QM +GA + +DW + AG +N+SV+SLL G
Sbjct: 87 LFSRESGSGNNWARGFHTHGPACRDDILNLVRKEVEECDRFGGFLTLQSVAGGTGSGLGAYAAGCLRDEYPASPLLGHCVWPHESGEVIVQSYNAMLTLPKLAQAADGVILVENEALTATCRRLLNISRPSYTDLNLVAGRALACVLLPAQWRSEADSVGVGGARFRPLSDLVSA------------------------VCAHPHYPLLSLRALPQIPPASVDFTTFTWPSLVRQLRQMASSGAPLESAVDWAAASGAPSSPPPAGTFRSVNKSVSSLLVLRG 345
BLAST of mRNA_P-fluviatile_contig1.43.1 vs. uniprot
Match: A0A2R6WPI8_MARPO (Tubulin delta chain n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WPI8_MARPO) HSP 1 Score: 178 bits (452), Expect = 3.640e-45 Identity = 103/286 (36.01%), Postives = 147/286 (51.40%), Query Frame = 2
Query: 1391 LLPRTGGAANNWAYGYHAHGATFTEACLEGVRRETERCDRLAGFCVLHSLAGGTGSGLGTCLTEALRDELPSAFLLNTVVCAHSSGEVILQNYNTLFTLSKLAKCSDGVLVVENEAATAVCRKLLRLERPSHAHLNKVICTSLVAALAPTSAAAAVEGAETRHGGVHDXXXXXXXXXXXXXXXXXXXXXXXXXXXHLCPNKDFVFLTASMVPQIPDSSRAFTSNTWEALTRRAYQMQVTGALADFELDWR-----------KKASYGAGAGVGLNQSVASLLTFHG 2215
L+ + G+ NNWA GY+ HG ++ L+ +R E E+CD GF +L SLAGGTG+GLG L EALRDE PS+F+L+ + + SGEVI+QNYN L TLS L +DGV++V+NE +A+CR LL + RPS +N+V +L AL P+ +T V LC + + +T PQ+P S FT+ TW A + QM +TGA + E+DW K+ + +N+S+A+LL G
Sbjct: 85 LVAQNSGSGNNWARGYYGHGPQCLDSVLDAIRLEVEQCDVFGGFVILQSLAGGTGAGLGAYLVEALRDEYPSSFILSHCIWPYESGEVIVQNYNVLLTLSHLQSFADGVIIVQNEQLSAICRTLLGVLRPSFDDINEVAVEALGCALLPSYWRTVQPSTQTIQTDVVSCRPEIRRGGPSSTRPGVRLLSDLLSV--LCSHPGYRMMTMRFTPQVPAQSLDFTNFTWAAQLKHLRQMLITGAHKELEMDWNVKLPTSSVHEHKRGVFPTNGHHQINRSLANLLILRG 368
BLAST of mRNA_P-fluviatile_contig1.43.1 vs. uniprot
Match: A0A8K1FP50_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FP50_PYTOL) HSP 1 Score: 176 bits (447), Expect = 1.010e-44 Identity = 94/269 (34.94%), Postives = 142/269 (52.79%), Query Frame = 2
Query: 1409 GAANNWAYGYHAHGATFTEACLEGVRRETERCDRLAGFCVLHSLAGGTGSGLGTCLTEALRDELPSAFLLNTVVCAHSSGEVILQNYNTLFTLSKLAKCSDGVLVVENEAATAVCRKLLRLERPSHAHLNKVICTSLVAALAPTSAAAAVEGAETRHGGVHDXXXXXXXXXXXXXXXXXXXXXXXXXXXHLCPNKDFVFLTASMVPQIPDSSRAFTSNTWEALTRRAYQMQVTGALADFELDWRKKASYGAGAGVGLNQSVASLLTFHG 2215
G+ NNWAYGY HGA +A ++ +RRE ERCD L GF VL S+AGGTGSG+G+ +TE + D S+ LLNTVV + SGEVI+QNYN + T++ +A +DG+LV++N+ A +C++LL + RPS +N V+ T L + P TR D LC + F L +PQ+P S+ F+++TW + + +QMQ+ + + +DW+ + N ++ +LL G
Sbjct: 93 GSGNNWAYGYSVHGAQHEDALMDLLRREAERCDLLKGFLVLQSVAGGTGSGVGSFVTEQIADAYSSSLLLNTVVWPYQSGEVIVQNYNAILTMASVADVADGILVLQNDVANEICKRLLNMPRPSFDAINSVLATHLASVFLPVHNKQDGNTNSTRSSTEGDVIQEMCE--------------------RLCSHAGFKLLDIKTIPQMPHRSKEFSTHTWTGILKHLHQMQIANSPLEEGIDWQISLDGKSSRRSWRNTALGNLLILRG 341
BLAST of mRNA_P-fluviatile_contig1.43.1 vs. uniprot
Match: A0A485LB49_9STRA (Tubulin delta chain n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LB49_9STRA) HSP 1 Score: 176 bits (446), Expect = 1.190e-44 Identity = 98/277 (35.38%), Postives = 146/277 (52.71%), Query Frame = 2
Query: 1385 AGLLPRTGGAANNWAYGYHAHGATFTEACLEGVRRETERCDRLAGFCVLHSLAGGTGSGLGTCLTEALRDELPSAFLLNTVVCAHSSGEVILQNYNTLFTLSKLAKCSDGVLVVENEAATAVCRKLLRLERPSHAHLNKVICTSLVAALAPTSAAAAVEGAETRHGGVHDXXXXXXXXXXXXXXXXXXXXXXXXXXXHLCPNKDFVFLTASMVPQIPDSSRAFTSNTWEALTRRAYQMQVTGALADFELDWRKKASYGAGAGVGLNQSVASLLTFHG 2215
A ++ GG+ NNWAYGY HG +A + VR+E E+CD GF L SLAGGTGSGLG+ + + LR+ PS++LLNTVV + SGEVI+QNYNTL T++ L++ SDGVL++EN+ A +C++LL + +PS A +N V+ + + L P + A TR HLC + + L ++PQ+ SR F+ + W + + +QM + + D + W LN+S+AS+L G
Sbjct: 86 ANVVCEQGGSGNNWAYGYAVHGNASADAVTDVVRKEVEQCDYFKGFLALQSLAGGTGSGLGSFVCDILREHYPSSYLLNTVVWPYRSGEVIVQNYNTLLTMACLSESSDGVLILENDMADQICQRLLAIPKPSFAQMNHVLANHIASILLPATPFQTASHA-TRF----------------------TSCLLPTIMQHLCAHPGYKLLNVKLIPQLAQRSRDFSVHQWPGMLKHLHQMHIANSGLDEGVRWDISLETPT-----LNKSIASMLFLRG 334
BLAST of mRNA_P-fluviatile_contig1.43.1 vs. uniprot
Match: A0A835YKN2_9STRA (Tubulin delta chain n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKN2_9STRA) HSP 1 Score: 172 bits (436), Expect = 4.050e-44 Identity = 103/254 (40.55%), Postives = 137/254 (53.94%), Query Frame = 2
Query: 1466 ACLEGVRRETERCDRLAGFCVLHSLAGGTGSGLGTCLTEALRDELPSAFLLNTVVCAHSSGEVILQNYNTLFTLSKLAKCSDGVLVVENEAATAVCRKLLRLERPSHAHLNKVICTSLVAALAPTSAAAAVEGAETRHGGVHDXXXXXXXXXXXXXXXXXXXXXXXXXXXHLCPNKDFVFLTASMVPQIPDSSRAFTSNTWEALTRRAYQMQVTGALADFELDWR----KKASYGAGAGVGLNQSVASLLTFHG 2215
A L + ERCD L G +LHS +GGTGSGLG+ LTE L D PSA LLN VVC +S+GEV +QN+N L TLS+LA+ S VL +EN+ A +CR++L+LERP+ LN VI T + AA+ P++ AA+ GA VPQ+P +S AFTS+TW A+T+R +QM V GA D LDWR ++ + N+SV+SL+T HG
Sbjct: 26 AVLVDTEPKAERCDYLEGMVMLHSASGGTGSGLGSYLTELLADAYPSAALLNCVVCPYSAGEVSVQNFNLLLTLSRLAEHSSAVLAIENDQAGNICRQVLKLERPTFRDLNDVIATHITAAVVPSTLAASNAGA---------------------------------------------------VPQMPRASAAFTSDTWPAITKRLHQMHVCGAAHDLCLDWRVTPQPSENFNFNSTSNFNKSVSSLVTLHG 228 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.43.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.43.1 >prot_P-fluviatile_contig1.43.1 ID=prot_P-fluviatile_contig1.43.1|Name=mRNA_P-fluviatile_contig1.43.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=188bp MSVITVQVGQCGNQIGASLFHALYEHADQPGAAAGGAEAERERAACRRSFback to top mRNA from alignment at P-fluviatile_contig1:733511..740974+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.43.1 ID=mRNA_P-fluviatile_contig1.43.1|Name=mRNA_P-fluviatile_contig1.43.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7464bp|location=Sequence derived from alignment at P-fluviatile_contig1:733511..740974+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:733511..740974+ >mRNA_P-fluviatile_contig1.43.1 ID=mRNA_P-fluviatile_contig1.43.1|Name=mRNA_P-fluviatile_contig1.43.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1128bp|location=Sequence derived from alignment at P-fluviatile_contig1:733511..740974+ (Porterinema fluviatile SAG_2381)back to top |