mRNA_P-fluviatile_contig9.15002.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig9.15002.1 vs. uniprot
Match: D7FPF9_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF9_ECTSI) HSP 1 Score: 283 bits (723), Expect = 3.100e-80 Identity = 278/659 (42.19%), Postives = 333/659 (50.53%), Query Frame = 2
Query: 431 DKTVELRKSCDYCVKLKRACDGKNPCSLCSRRNKPCTRSARKKSGPAKGTKYAPRRKRPMMTEWPDHAGLEPRDPGLPYHFPPG--MGSRGRHMHPHYPMSIGEAAAGR--GVPYLGGRSSSSFHPVPSR--------RLGEEVPWRDD-PLASSLSRHQQHDRRTMEMGRSAGPLSSSQAPLPLPMGWYAPGL--HDEAEPGGG------GGYGMAPRHRMEPPMGYAPSAAEALARRQQQQQHRTQPAHPRDAWSVSPLEAETAV-------SERSAV-AAMRDSQGRSWDPPQPGWPGHGDHALRS-SRGGMDLAYGARARVSPATLPSRP---------------QMLPPGADTYAPGAPPAAAREAAGHPDQRLR-MDAEASLPSLPPPREPADPTAGF--YSAANRASWRRAPEMGSWEPSRAGGGDDSRA-----PQHYEQHP----GYYDPSERPPPRSAWNSHGXXXXXXXXXXXX------RYDYGDYRGERGGQERRGGESVVDWQLPSHGGXXXXXA--DGYRDPYDFPPPP-HGYERRLTPLERPQVD---EREKRYIEQPGGQVLVGAPHPAERADRGRYQAYGGPDGHPYKRSIDRLVWSDAGGGSGG-------DHVDFQQQRGRQGSALSRADWERGGREGL 2179
D T+ELRKSCDYCV+LKRACDGKNPCSLC+RR+KPCTRSARKKSGPAKGTKYAPRRKR ++ EW D R P LP+ FP G G G+ H +P++ +AA R G Y G R G E W + PL Q RR E G + LS S LP WYAPG H+E E GG GG G AP PPMGYAP+ AE L+RRQQ+ + H R ++S+S LE R V AA + R+ + P W D LRS +G LA G R R+SP TL S ++ PGAD Y A ARE AG P +R R +D E+SL SLPPPREP DPTAGF + AANR SWRR +WE GGG D R P+ Y Q+P G ++ S+RP XXXXXXXXXX RY D GQ R G SVV+W LP HG XXXXX D Y + + PPPP HG++R L PLERP + + E R+ +L+GAP P D Y A G DG Y+ R W+ GG G DH D++Q++ R R DWE GGR G
Sbjct: 13 DPTIELRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPRRKRSVIAEWADRTSGA-RGPLLPHEFPGGGTRGGGGQLPHHDFPLAPIDAAGMRAAGRAYYSGXXXXXXXXXXXXXXXXXXXGRFGAEALWEEGGPLPG-----QGRGRRPGEEGHPSSSLSPSSG---LPFPWYAPGPSPHEETEGRGGERGGVGGGRGFAP-----PPMGYAPTTAEELSRRQQEHGY-----HHRASYSMSSLEXXXXXXXXXXXXGRRPGVPAAPEPYRRRTLELPPGHWASPSDPFLRSPQQGEAALAQGKRVRLSPPTLGSGAAXXXXXXXXXXXXXRSVMRPGADYYPSPATSPRAREMAGRPHERPRELDPESSLLSLPPPREPPDPTAGFSFHPAANRPSWRRG---STWESGSPGGGGDGRPVDRNDPRAYHQYPPQQLGSFESSDRPXXXXXXXXXXXXXXXXXXXXRGASLGDRRYRNFDREAGEDGQGR--GRSVVEWPLP-HGXXXXXXXXXDPYHERVELPPPPPHGFDRHL-PLERPLMGGGRQGEGRH------DMLLGAPSPPR--DEQGYAARGA-DGGAYEHPSGRARWAGGGGDQVGLPGRGSRDHRDYEQEQQR--VERGRQDWE-GGRRGF 633
BLAST of mRNA_P-fluviatile_contig9.15002.1 vs. uniprot
Match: A0A6H5L009_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L009_9PHAE) HSP 1 Score: 269 bits (688), Expect = 2.550e-75 Identity = 276/657 (42.01%), Postives = 325/657 (49.47%), Query Frame = 2
Query: 428 EDKTVELRKSCDYCVKLKRACDGKNPCSLCSRRNKPCTRSARKKSGPAKGTKYAPRRKRPMMTEWPDHAGLEPRDPGLPYHFPPGMGSRGRHMHPHYPMSI------GEAAAGRGVPYLGGRSSSSFHPVPSR----RLGEEVPWRDDPLASSLSRHQQHDRRTMEMGRSAGPLSSSQAPLPLPMGWYA--PGLHDEAEPGGGGGYGMAPRHRMEPPM----GYAPSAAEALARRQQQQQHRTQPAHPRDAWSVSPLEAETA----VSERSAVAAMRDSQGRSWDPPQPG-WPGHGDHALRS-SRGGMDLAYGARARVSPATLPS----------RPQMLPPGADTYAPGAPPAAAREAAGHPDQRLR-MDAEASLPSLPPPREPADPTAGF--YSAANRASWRRAPEMGSWEPSRAGGGD----DSRAPQHYEQHP----GYYDPSERPPPRSAWNSHGXXXXXXXXXXXX----------RYDYGDYRGERGGQERRGGESVVDWQLPSHGGXXXXXA--DGYRDPYDFPPPPHGYERRLTPLERPQVDEREKRYIEQPGGQ-------VLVGAPHPAERADRGRYQAYGG----PDGHPYKRSIDRLVWSDAGGGSGG-------DHVDFQQQRGRQGSALSRADWERGGREGL 2179
+D TVELRKSCDYCV+LKRACDGKNPCSLC+RR+KPCTRSARKKSGPAKGTKYAPRRKR ++ EW D G P LP+ F G S G PH+ S+ G AA R GG S+ R G E W + R R E G + L SS LP WYA P H EAE G GG G GYAP+ AE L+ + H R ++S+S LEAE R AMR+ R PG W D LRS +G LA G R R+SP T S RP M P GAD Y A A E AG P +R R +D E+S+ SLPPPREP DPTAGF + AANR SWRR S P GGGD D P+ Y Q+P G ++ S+R P S+W+S GXXXXXXXXXXXX RY D GQ R G VV+W LP HG XXXXX D Y + + PPPPHG++R L PLERP + GG+ +L+GAP P D+ Y A GG DG Y+ R W+ GG G DH DF+Q++ Q R DW+ GGR G
Sbjct: 4 QDPTVELRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPRRKRSVIAEWADRTGGA-GGPPLPHEFQGGGTSGGGGQLPHHDFSLAPFDAAGMRAAERTYNSGGGLSAHXXXXXXXXXXGGRFGAEALWEEGAPRPGQGR----GRWPGEEGHPSSLLPSSPG---LPFPWYASRPSPHGEAE-GRGGERGXXXXXXXXXXXXXXXGYAPTTAEELSXXXXXXGY-----HHRASYSMSFLEAEXXXXXXAGRRPGAPAMREPYRRRTPELPPGHWASPSDPFLRSPQQGEAALAQGKRVRLSPPTFGSGAAGGSGGGSRPVMRP-GADYYPSPATSPRASEMAGRPHERPRELDPESSVLSLPPPREPPDPTAGFSFHPAANRPSWRRGSTWESGSPG-GGGGDGRPVDRNDPRAYHQYPPPQLGSFESSDRAPSSSSWSSPGXXXXXXXXXXXXGRGASLGGDRRYRNFDREAGEDGQGR--GRGVVEWPLP-HGXXXXXXXXXDPYHEQVELPPPPHGFDRHL-PLERPLMG----------GGRQGEGKHDMLLGAPSPPR--DKQGYAARGGVGGGADGGAYEYPSGRPRWAGGGGDQMGLPGRGSRDHRDFEQEQ--QQVERGRQDWD-GGRRGF 625
BLAST of mRNA_P-fluviatile_contig9.15002.1 vs. uniprot
Match: D8LPZ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ9_ECTSI) HSP 1 Score: 86.3 bits (212), Expect = 1.260e-13 Identity = 42/59 (71.19%), Postives = 47/59 (79.66%), Query Frame = 2
Query: 428 EDKTVELRKSCDYCVKLKRACDGKNPCSLCSRRNKPCTRSARKKSGPAKGTKYAPRRKR 604
+D V LRKSCD CV+LKRACDGKNPC LC RR + CTRS ++KSGPAKGTKY RR R
Sbjct: 56 DDGRVLLRKSCDLCVRLKRACDGKNPCHLCLRRRETCTRSVKRKSGPAKGTKYTTRRSR 114
BLAST of mRNA_P-fluviatile_contig9.15002.1 vs. uniprot
Match: A0A6H5L7F3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F3_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 2.230e-12 Identity = 39/55 (70.91%), Postives = 45/55 (81.82%), Query Frame = 2
Query: 440 VELRKSCDYCVKLKRACDGKNPCSLCSRRNKPCTRSARKKSGPAKGTKYAPRRKR 604
V LRKSCD CV+LKRACDG++PC LC RR + CTRS ++KSGPAKGTKY RR R
Sbjct: 32 VLLRKSCDLCVRLKRACDGQSPCQLCLRRRETCTRSVKRKSGPAKGTKYTTRRVR 86
BLAST of mRNA_P-fluviatile_contig9.15002.1 vs. uniprot
Match: D8LKM5_ECTSI (Zinc finger transcriptional regulator n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM5_ECTSI) HSP 1 Score: 79.7 bits (195), Expect = 6.710e-12 Identity = 36/53 (67.92%), Postives = 43/53 (81.13%), Query Frame = 2
Query: 446 LRKSCDYCVKLKRACDGKNPCSLCSRRNKPCTRSARKKSGPAKGTKYAPRRKR 604
LRKSCDYCV++KR C G PC+LC+RRNK C RS +K+SGPAKGTKY R+ R
Sbjct: 23 LRKSCDYCVRMKRGCSGGTPCALCNRRNKNCIRSIKKRSGPAKGTKYCKRKPR 75
BLAST of mRNA_P-fluviatile_contig9.15002.1 vs. uniprot
Match: A0A6H5JII0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JII0_9PHAE) HSP 1 Score: 64.7 bits (156), Expect = 4.530e-7 Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = 2
Query: 476 LKRACDGKNPCSLCSRRNKPCTRSARKKSGPAKGTKYAPRRKR 604
+KRACDG +PC+LCSRR K C R R+KSGPAKG KYAPRR++
Sbjct: 1 MKRACDGGSPCALCSRRGKVCERRLRRKSGPAKGAKYAPRRRK 43
BLAST of mRNA_P-fluviatile_contig9.15002.1 vs. uniprot
Match: D8LM00_ECTSI (Zn(2)-C6 fungal-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM00_ECTSI) HSP 1 Score: 58.9 bits (141), Expect = 3.840e-5 Identity = 27/51 (52.94%), Postives = 36/51 (70.59%), Query Frame = 2
Query: 431 DKTVELRKSCDYCVKLKRACDGKNPCSLCSRRNKPCTRSARKKSGPAKGTK 583
D V LR +CD C ++KR CDG PC+ C RR++PC S ++KSGP KG+K
Sbjct: 202 DTMVVLRSACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSK 252
BLAST of mRNA_P-fluviatile_contig9.15002.1 vs. uniprot
Match: A0A6H5JM19_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM19_9PHAE) HSP 1 Score: 58.9 bits (141), Expect = 4.230e-5 Identity = 27/51 (52.94%), Postives = 36/51 (70.59%), Query Frame = 2
Query: 431 DKTVELRKSCDYCVKLKRACDGKNPCSLCSRRNKPCTRSARKKSGPAKGTK 583
D V LR +CD C ++KR CDG PC+ C RR++PC S ++KSGP KG+K
Sbjct: 178 DTMVVLRSACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSK 228 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15002.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig9.15002.1 >prot_P-fluviatile_contig9.15002.1 ID=prot_P-fluviatile_contig9.15002.1|Name=mRNA_P-fluviatile_contig9.15002.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=691bp MQDTKDSDGGGLEEKPKAPSEDKTVELRKSCDYCVKLKRACDGKNPCSLCback to top mRNA from alignment at P-fluviatile_contig9:56833..62492- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig9.15002.1 ID=mRNA_P-fluviatile_contig9.15002.1|Name=mRNA_P-fluviatile_contig9.15002.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5660bp|location=Sequence derived from alignment at P-fluviatile_contig9:56833..62492- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig9:56833..62492- >mRNA_P-fluviatile_contig9.15002.1 ID=mRNA_P-fluviatile_contig9.15002.1|Name=mRNA_P-fluviatile_contig9.15002.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4146bp|location=Sequence derived from alignment at P-fluviatile_contig9:56833..62492- (Porterinema fluviatile SAG_2381)back to top |