mRNA_P-fluviatile_contig9.15002.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig9.15002.1
Unique NamemRNA_P-fluviatile_contig9.15002.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig9.15002.1 vs. uniprot
Match: D7FPF9_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF9_ECTSI)

HSP 1 Score: 283 bits (723), Expect = 3.100e-80
Identity = 278/659 (42.19%), Postives = 333/659 (50.53%), Query Frame = 2
Query:  431 DKTVELRKSCDYCVKLKRACDGKNPCSLCSRRNKPCTRSARKKSGPAKGTKYAPRRKRPMMTEWPDHAGLEPRDPGLPYHFPPG--MGSRGRHMHPHYPMSIGEAAAGR--GVPYLGGRSSSSFHPVPSR--------RLGEEVPWRDD-PLASSLSRHQQHDRRTMEMGRSAGPLSSSQAPLPLPMGWYAPGL--HDEAEPGGG------GGYGMAPRHRMEPPMGYAPSAAEALARRQQQQQHRTQPAHPRDAWSVSPLEAETAV-------SERSAV-AAMRDSQGRSWDPPQPGWPGHGDHALRS-SRGGMDLAYGARARVSPATLPSRP---------------QMLPPGADTYAPGAPPAAAREAAGHPDQRLR-MDAEASLPSLPPPREPADPTAGF--YSAANRASWRRAPEMGSWEPSRAGGGDDSRA-----PQHYEQHP----GYYDPSERPPPRSAWNSHGXXXXXXXXXXXX------RYDYGDYRGERGGQERRGGESVVDWQLPSHGGXXXXXA--DGYRDPYDFPPPP-HGYERRLTPLERPQVD---EREKRYIEQPGGQVLVGAPHPAERADRGRYQAYGGPDGHPYKRSIDRLVWSDAGGGSGG-------DHVDFQQQRGRQGSALSRADWERGGREGL 2179
            D T+ELRKSCDYCV+LKRACDGKNPCSLC+RR+KPCTRSARKKSGPAKGTKYAPRRKR ++ EW D      R P LP+ FP G   G  G+  H  +P++  +AA  R  G  Y  G                    R G E  W +  PL       Q   RR  E G  +  LS S     LP  WYAPG   H+E E  GG      GG G AP     PPMGYAP+ AE L+RRQQ+  +     H R ++S+S LE              R  V AA    + R+ + P   W    D  LRS  +G   LA G R R+SP TL S                  ++ PGAD Y   A    ARE AG P +R R +D E+SL SLPPPREP DPTAGF  + AANR SWRR     +WE    GGG D R      P+ Y Q+P    G ++ S+RP          XXXXXXXXXX        RY   D      GQ R  G SVV+W LP HG XXXXX   D Y +  + PPPP HG++R L PLERP +    + E R+       +L+GAP P    D   Y A G  DG  Y+    R  W+  GG   G       DH D++Q++ R      R DWE GGR G 
Sbjct:   13 DPTIELRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPRRKRSVIAEWADRTSGA-RGPLLPHEFPGGGTRGGGGQLPHHDFPLAPIDAAGMRAAGRAYYSGXXXXXXXXXXXXXXXXXXXGRFGAEALWEEGGPLPG-----QGRGRRPGEEGHPSSSLSPSSG---LPFPWYAPGPSPHEETEGRGGERGGVGGGRGFAP-----PPMGYAPTTAEELSRRQQEHGY-----HHRASYSMSSLEXXXXXXXXXXXXGRRPGVPAAPEPYRRRTLELPPGHWASPSDPFLRSPQQGEAALAQGKRVRLSPPTLGSGAAXXXXXXXXXXXXXRSVMRPGADYYPSPATSPRAREMAGRPHERPRELDPESSLLSLPPPREPPDPTAGFSFHPAANRPSWRRG---STWESGSPGGGGDGRPVDRNDPRAYHQYPPQQLGSFESSDRPXXXXXXXXXXXXXXXXXXXXRGASLGDRRYRNFDREAGEDGQGR--GRSVVEWPLP-HGXXXXXXXXXDPYHERVELPPPPPHGFDRHL-PLERPLMGGGRQGEGRH------DMLLGAPSPPR--DEQGYAARGA-DGGAYEHPSGRARWAGGGGDQVGLPGRGSRDHRDYEQEQQR--VERGRQDWE-GGRRGF 633          
BLAST of mRNA_P-fluviatile_contig9.15002.1 vs. uniprot
Match: A0A6H5L009_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L009_9PHAE)

HSP 1 Score: 269 bits (688), Expect = 2.550e-75
Identity = 276/657 (42.01%), Postives = 325/657 (49.47%), Query Frame = 2
Query:  428 EDKTVELRKSCDYCVKLKRACDGKNPCSLCSRRNKPCTRSARKKSGPAKGTKYAPRRKRPMMTEWPDHAGLEPRDPGLPYHFPPGMGSRGRHMHPHYPMSI------GEAAAGRGVPYLGGRSSSSFHPVPSR----RLGEEVPWRDDPLASSLSRHQQHDRRTMEMGRSAGPLSSSQAPLPLPMGWYA--PGLHDEAEPGGGGGYGMAPRHRMEPPM----GYAPSAAEALARRQQQQQHRTQPAHPRDAWSVSPLEAETA----VSERSAVAAMRDSQGRSWDPPQPG-WPGHGDHALRS-SRGGMDLAYGARARVSPATLPS----------RPQMLPPGADTYAPGAPPAAAREAAGHPDQRLR-MDAEASLPSLPPPREPADPTAGF--YSAANRASWRRAPEMGSWEPSRAGGGD----DSRAPQHYEQHP----GYYDPSERPPPRSAWNSHGXXXXXXXXXXXX----------RYDYGDYRGERGGQERRGGESVVDWQLPSHGGXXXXXA--DGYRDPYDFPPPPHGYERRLTPLERPQVDEREKRYIEQPGGQ-------VLVGAPHPAERADRGRYQAYGG----PDGHPYKRSIDRLVWSDAGGGSGG-------DHVDFQQQRGRQGSALSRADWERGGREGL 2179
            +D TVELRKSCDYCV+LKRACDGKNPCSLC+RR+KPCTRSARKKSGPAKGTKYAPRRKR ++ EW D  G     P LP+ F  G  S G    PH+  S+      G  AA R     GG S+             R G E  W +        R     R   E G  +  L SS     LP  WYA  P  H EAE G GG  G               GYAP+ AE L+       +     H R ++S+S LEAE         R    AMR+   R      PG W    D  LRS  +G   LA G R R+SP T  S          RP M P GAD Y   A    A E AG P +R R +D E+S+ SLPPPREP DPTAGF  + AANR SWRR     S  P   GGGD    D   P+ Y Q+P    G ++ S+R P  S+W+S GXXXXXXXXXXXX          RY   D      GQ R  G  VV+W LP HG XXXXX   D Y +  + PPPPHG++R L PLERP +           GG+       +L+GAP P    D+  Y A GG     DG  Y+    R  W+  GG   G       DH DF+Q++  Q     R DW+ GGR G 
Sbjct:    4 QDPTVELRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPRRKRSVIAEWADRTGGA-GGPPLPHEFQGGGTSGGGGQLPHHDFSLAPFDAAGMRAAERTYNSGGGLSAHXXXXXXXXXXGGRFGAEALWEEGAPRPGQGR----GRWPGEEGHPSSLLPSSPG---LPFPWYASRPSPHGEAE-GRGGERGXXXXXXXXXXXXXXXGYAPTTAEELSXXXXXXGY-----HHRASYSMSFLEAEXXXXXXAGRRPGAPAMREPYRRRTPELPPGHWASPSDPFLRSPQQGEAALAQGKRVRLSPPTFGSGAAGGSGGGSRPVMRP-GADYYPSPATSPRASEMAGRPHERPRELDPESSVLSLPPPREPPDPTAGFSFHPAANRPSWRRGSTWESGSPG-GGGGDGRPVDRNDPRAYHQYPPPQLGSFESSDRAPSSSSWSSPGXXXXXXXXXXXXGRGASLGGDRRYRNFDREAGEDGQGR--GRGVVEWPLP-HGXXXXXXXXXDPYHEQVELPPPPHGFDRHL-PLERPLMG----------GGRQGEGKHDMLLGAPSPPR--DKQGYAARGGVGGGADGGAYEYPSGRPRWAGGGGDQMGLPGRGSRDHRDFEQEQ--QQVERGRQDWD-GGRRGF 625          
BLAST of mRNA_P-fluviatile_contig9.15002.1 vs. uniprot
Match: D8LPZ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ9_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 1.260e-13
Identity = 42/59 (71.19%), Postives = 47/59 (79.66%), Query Frame = 2
Query:  428 EDKTVELRKSCDYCVKLKRACDGKNPCSLCSRRNKPCTRSARKKSGPAKGTKYAPRRKR 604
            +D  V LRKSCD CV+LKRACDGKNPC LC RR + CTRS ++KSGPAKGTKY  RR R
Sbjct:   56 DDGRVLLRKSCDLCVRLKRACDGKNPCHLCLRRRETCTRSVKRKSGPAKGTKYTTRRSR 114          
BLAST of mRNA_P-fluviatile_contig9.15002.1 vs. uniprot
Match: A0A6H5L7F3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F3_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 2.230e-12
Identity = 39/55 (70.91%), Postives = 45/55 (81.82%), Query Frame = 2
Query:  440 VELRKSCDYCVKLKRACDGKNPCSLCSRRNKPCTRSARKKSGPAKGTKYAPRRKR 604
            V LRKSCD CV+LKRACDG++PC LC RR + CTRS ++KSGPAKGTKY  RR R
Sbjct:   32 VLLRKSCDLCVRLKRACDGQSPCQLCLRRRETCTRSVKRKSGPAKGTKYTTRRVR 86          
BLAST of mRNA_P-fluviatile_contig9.15002.1 vs. uniprot
Match: D8LKM5_ECTSI (Zinc finger transcriptional regulator n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM5_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 6.710e-12
Identity = 36/53 (67.92%), Postives = 43/53 (81.13%), Query Frame = 2
Query:  446 LRKSCDYCVKLKRACDGKNPCSLCSRRNKPCTRSARKKSGPAKGTKYAPRRKR 604
            LRKSCDYCV++KR C G  PC+LC+RRNK C RS +K+SGPAKGTKY  R+ R
Sbjct:   23 LRKSCDYCVRMKRGCSGGTPCALCNRRNKNCIRSIKKRSGPAKGTKYCKRKPR 75          
BLAST of mRNA_P-fluviatile_contig9.15002.1 vs. uniprot
Match: A0A6H5JII0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JII0_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 4.530e-7
Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = 2
Query:  476 LKRACDGKNPCSLCSRRNKPCTRSARKKSGPAKGTKYAPRRKR 604
            +KRACDG +PC+LCSRR K C R  R+KSGPAKG KYAPRR++
Sbjct:    1 MKRACDGGSPCALCSRRGKVCERRLRRKSGPAKGAKYAPRRRK 43          
BLAST of mRNA_P-fluviatile_contig9.15002.1 vs. uniprot
Match: D8LM00_ECTSI (Zn(2)-C6 fungal-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM00_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 3.840e-5
Identity = 27/51 (52.94%), Postives = 36/51 (70.59%), Query Frame = 2
Query:  431 DKTVELRKSCDYCVKLKRACDGKNPCSLCSRRNKPCTRSARKKSGPAKGTK 583
            D  V LR +CD C ++KR CDG  PC+ C RR++PC  S ++KSGP KG+K
Sbjct:  202 DTMVVLRSACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSK 252          
BLAST of mRNA_P-fluviatile_contig9.15002.1 vs. uniprot
Match: A0A6H5JM19_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM19_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 4.230e-5
Identity = 27/51 (52.94%), Postives = 36/51 (70.59%), Query Frame = 2
Query:  431 DKTVELRKSCDYCVKLKRACDGKNPCSLCSRRNKPCTRSARKKSGPAKGTK 583
            D  V LR +CD C ++KR CDG  PC+ C RR++PC  S ++KSGP KG+K
Sbjct:  178 DTMVVLRSACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSK 228          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15002.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FPF9_ECTSI3.100e-8042.19Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5L009_9PHAE2.550e-7542.01Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LPZ9_ECTSI1.260e-1371.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7F3_9PHAE2.230e-1270.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKM5_ECTSI6.710e-1267.92Zinc finger transcriptional regulator n=1 Tax=Ecto... [more]
A0A6H5JII0_9PHAE4.530e-769.77Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LM00_ECTSI3.840e-552.94Zn(2)-C6 fungal-type domain-containing protein (Fr... [more]
A0A6H5JM19_9PHAE4.230e-552.94Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig9contigP-fluviatile_contig9:56833..62492 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionZn(2)-C6 fungal-type DNA-binding domain
Ec32 orthologEc-14_004780.1
Exons3
Model size2440
Cds size2073
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig9.15002.1prot_P-fluviatile_contig9.15002.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig9 56833..62125 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817304.5392034-CDS-P-fluviatile_contig9:56832..579571622817304.5392034-CDS-P-fluviatile_contig9:56832..57957Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 56833..57957 -
1693572002.6225016-CDS-P-fluviatile_contig9:56832..579571693572002.6225016-CDS-P-fluviatile_contig9:56832..57957Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 56833..57957 -
1622817304.5508482-CDS-P-fluviatile_contig9:58454..593391622817304.5508482-CDS-P-fluviatile_contig9:58454..59339Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 58455..59339 -
1693572002.6327178-CDS-P-fluviatile_contig9:58454..593391693572002.6327178-CDS-P-fluviatile_contig9:58454..59339Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 58455..59339 -
1622817304.5622554-CDS-P-fluviatile_contig9:62062..621251622817304.5622554-CDS-P-fluviatile_contig9:62062..62125Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 62063..62125 -
1693572002.6467853-CDS-P-fluviatile_contig9:62062..621251693572002.6467853-CDS-P-fluviatile_contig9:62062..62125Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 62063..62125 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817304.5732853-UTR-P-fluviatile_contig9:62125..624921622817304.5732853-UTR-P-fluviatile_contig9:62125..62492Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 62126..62492 -
1693572002.663678-UTR-P-fluviatile_contig9:62125..624921693572002.663678-UTR-P-fluviatile_contig9:62125..62492Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 62126..62492 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig9.15002.1

>prot_P-fluviatile_contig9.15002.1 ID=prot_P-fluviatile_contig9.15002.1|Name=mRNA_P-fluviatile_contig9.15002.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=691bp
MQDTKDSDGGGLEEKPKAPSEDKTVELRKSCDYCVKLKRACDGKNPCSLC
SRRNKPCTRSARKKSGPAKGTKYAPRRKRPMMTEWPDHAGLEPRDPGLPY
HFPPGMGSRGRHMHPHYPMSIGEAAAGRGVPYLGGRSSSSFHPVPSRRLG
EEVPWRDDPLASSLSRHQQHDRRTMEMGRSAGPLSSSQAPLPLPMGWYAP
GLHDEAEPGGGGGYGMAPRHRMEPPMGYAPSAAEALARRQQQQQHRTQPA
HPRDAWSVSPLEAETAVSERSAVAAMRDSQGRSWDPPQPGWPGHGDHALR
SSRGGMDLAYGARARVSPATLPSRPQMLPPGADTYAPGAPPAAAREAAGH
PDQRLRMDAEASLPSLPPPREPADPTAGFYSAANRASWRRAPEMGSWEPS
RAGGGDDSRAPQHYEQHPGYYDPSERPPPRSAWNSHGGGSGGYSGGGGGR
YDYGDYRGERGGQERRGGESVVDWQLPSHGGGGGGGADGYRDPYDFPPPP
HGYERRLTPLERPQVDEREKRYIEQPGGQVLVGAPHPAERADRGRYQAYG
GPDGHPYKRSIDRLVWSDAGGGSGGDHVDFQQQRGRQGSALSRADWERGG
REGLQAMHSSPHETPRETAAGEGGGRGGGRGSPRWELEHRGEGFAAQETR
RRGDENSTAAPPSSPDYDRQTRRSPQQEQGDEGRESSPRQG
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mRNA from alignment at P-fluviatile_contig9:56833..62492-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig9.15002.1 ID=mRNA_P-fluviatile_contig9.15002.1|Name=mRNA_P-fluviatile_contig9.15002.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5660bp|location=Sequence derived from alignment at P-fluviatile_contig9:56833..62492- (Porterinema fluviatile SAG_2381)
TAAACGTTGCGCTGCTTGGGGAGAGGGATGTGTGGTTGCCATATGTGTTT GCGCCGGCACAACAACAACCATGGGAAAGCAGAGTGGGAGACAGTCAGCA GTTGGCCCTCATCGCTTATGTGGACGTGATTCGGAGAGTCGTCGTTAGTG GGCAGCGCAGCGTGAAAATGCCCTGGTTGTACCGTCTCGCGCCACCAAGT CGTCCTCTCCCGGTCTCTCCGTCTCTTTAACACCCACACACGCTCGCGCG CGCTTGCCCCTCCTCCTCCCCGTCCCGCGATTTATAGTACGCCTGTTTAC AGGTCTCCCCGCCTCTGCGCTTCTGCCTCGATACTAACGCCGGCTGCCGC CGGCGAGAGATGCCGCGATGCAAGACACGAAGGACTCCGATGGCGGAGGC TTAGAAGAGAAGCCGAAGGCTCCGTCTGAGGTGGGGAAAATGGCGGCACG ACTCTTTCGTCTCAATTTCAAGAGAGAAGTCAAACTCTTGAACCGAATTT AGGGACCCCTACTACACTACACACGTTCGTTACACACCCGCTCTCTCCCG CTCCTCGTGCGCGAGGACAACCGCGGGCGGTGTGTCCCCGCGTATATTCA CGAACGGGCCCCTTTTCTCGTGTGGCTCGCGCCGGACAGTATTTCTCCGG GGGCGGTTTCATCGATACCTGCCCTCCCCTCGCGCCTCTCAAAGCGTCAG CAGTTCAGCGCACGCAGTCAGCTACCCGTTTTTTTCGTCGAGGACACAAC ACCGCGTGGCGCTCTTCTATGTAAATATAAGGGGATGGTAGCTGTTGTGA GTTTTTCACAACGTGTGGTAAGGGGATGCCGACTGGCTGGTTGGCGCACC GACACCGCGCCGCTCATGCGGTCTCTCCCTCACGTACACTCGTTTCGAGG GCAGGCGCGCGCACCCTCGCAGAGAGGGACGGTCAAGTTTGGTTTCCCTT CTCTACAAATGTACGCACATACAGACACGTAATAACCATACAAGAATGTT GAGCCGCGCTTGTTTGTAAGATGGTTGAGCGCTCTCTCTCTCCTTCTCCT CATCTCGTTCTCCTCGGGCAAGTAATAAAGCCCCGCGCCGAATCAATGAC CCCGCCGGACGCTCATTTATCAAGAAAACGGTGGCAGCGGAGAGAGCATC CCGGCCTCACTAGTTTCCCTGTAGGTAATTCGGGTGTGTACGAACGATGA ACCCACATCAAGCCGTCCGTGTAGTTTCAGTTGACGACGCCGGGTTTCGT CTTGTCGGACGAAAAGGTGTGCTCTAAACTGGATACGAATGCTCTCTCCG CCCATTAAAGATGAAAAGTTCGCGGCCCCCCGACCGCGTTTGCCGGGGTT TTCCCGCTCCGATATCCGTTCTCCGCCCTCTCTCCAAGACGTCGGCGACA GGGGGTGGGGGCAGGGCGAGGCCGACACGATGTTCCTCTTTTTTGCAACT AAAGCCTGTGTCGCGTCTCTCTTGGCGCGCGCGGGCGAAACGTATAGACA GCAAAAGACATATGCCATCTGCCTACCTGCGCATTAAAGGGGAACCAGAA ACAAAAGCGCGCGTTTTTTTGCACGCAGCCATGAGGCAAGAGCGCGGTCG GCGGGATCAAGCGAACAGAGCTCGCCAGCCTTTCTCAAGGGGTCTCCGAA GCGTAGGGTCTCTGTGAGAGTGATTCAGCAGCTTGCGCTTATGAAAGGCT GCTCATCGCCGTTGTTTGAACCGGACTTTTGGACCAGGGAACCGAAACGA TGGCGGAAAAGCCAATGCGAAATTTGTGCGGTCGAGTGGAGCCTGCGCAT CCCCCAAGAAGAAAGCACACTGCCGTTTTGGCAAATAAAAATCTGGCCGG TGGACGATTCCGAAACTTTTGTTTTGCGCGCATATATCATGCATCACACC CACTACACTCGAGTATTTTTACTTTGTTTCGGCATAAATGTGTCAGGCTT AATGTTCTAGAATCTCGAAAAGAGCTAATGTGAGAAACAACCACATTGCG TGCCCTGTTGAAAACCGAGGCTAGAGCACGTGGGAAGAAGGCGGGTCGTT CCCTAGTAATCTGCGACAAAAAGCACGATCTTCAAATGCGCGTCACGGAG AGAGGAAGAGTACGCGCGGTTAGCCACGTGTAACCCTCCTAGCGAATTTG GCCTACGCTGCATAACTCGTCCTTTTCGCTTTTCACAGCTTTGTTTAAAT AGATGGTGTGAAGGAAGGGCATTCAAAAATGAGAACCATGTGCGTACACC ACCCCCCTAAATGAGAGTGATTTCGTGCTCTACTTTAGACACTTGACGTT TGGGCTGGCAATCGAAATGGCTCTGGGTTCCCACATTCCGCACGTTGTAC CGTCGCGCCTTCCCCTACTGCTGTACAGTCGTTGCTTACATCGACGTCTG TTCCATGCCGTAGTTCCCTTCCCTGCTTTTGGGGCTATGACTCCGCCGCC TCATCATTTTCTGGCCAAGGACTGAGACTTGGTACCCTCCCCCGTGAGGA AGACTCGATTTGAAGAAAGCCCTCCCCACCCTGTTACGATGTTTACGACG CATGACTCCCCCGGTTGCGATTTTGACACTAGTGAAGGTTGGAAGCGCGG CTCTTGACGCCGGGTATGTTGTCCTCACTGGGTACTGCGTAAGTTTGGTG TCAGTCAACCGCGCTCACTTCTTGATGTACGGTCAATGTCGATGTCGAGA GTTTTTCGTTCTCCTCACGTATTCCTGGGGGGATTAAACTCACCATGATC TACCGCGGTGGGGGGAGCATAGTATCTCAAATGAGCAGGAATAGTTTATT CGCGGGGAGCAAGCAACGGGGACACATGCTATCCTTCTCAGGCTTCTGGA CGACGTGCCGACAGATGGGGGCGTACTCATGTTTTGCATGCCTTAGTTGT TAGACCATTGACCACGCGTCCTCGAGAGGACGGAGCATTGTTCCAGTGTT GACAGATGGGGGGGGGGGTATGATTCCGAAGGTTTTGCGTAGCAAGGCAC CAGTACTGCCAAGGAGACGGATTCACCGCGCCTCTACTTCCTCACCTCTC CTCCCCGCCCTCCTGACATTGTCGTTCCCCCCGCCGGCCCTGTCTATACT CGCCCTCCGTTGGTCATCCCCCCCCCCCCCCTCTTTTCCTCCGTCCCTTC AAGGACAAAACCGTCGAGCTACGCAAGAGTTGCGACTACTGCGTGAAATT GAAGCGCGCCTGCGACGGCAAGAACCCATGCTCGCTGTGCTCCCGCCGCA ACAAGCCATGCACGCGCAGCGCCAGAAAGAAGAGCGGCCCCGCTAAGGGC ACCAAGTACGCGCCGCGTCGAAAACGGCCAATGATGACGGAGTGGCCGGA CCACGCTGGCCTCGAGCCGAGGGATCCTGGCCTTCCGTACCACTTTCCTC CTGGCATGGGCAGCCGTGGTAGACACATGCACCCCCATTACCCCATGTCA ATTGGGGAAGCGGCGGCGGGCAGAGGCGTTCCGTATCTCGGCGGCCGGTC CTCGTCGTCGTTCCACCCGGTGCCTTCCAGGAGGTTGGGCGAGGAGGTGC CGTGGAGAGACGACCCCCTGGCGTCTTCGCTCTCCCGGCACCAGCAACAT GATCGGCGGACGATGGAGATGGGGCGGTCGGCGGGGCCGCTGTCGTCCTC ACAGGCGCCACTTCCACTTCCGATGGGGTGGTACGCGCCAGGACTGCATG ACGAAGCCGAGCCCGGCGGCGGTGGCGGCTACGGGATGGCCCCCAGGCAT CGGATGGAGCCGCCCATGGGGTATGCGCCTTCCGCGGCAGAGGCGCTCGC TCGAAGACAACAACAGCAGCAGCACCGTACCCAGCCCGCCCACCCACGCG ATGCGTGGTCGGTCTCGCCGCTGGAAGCGGAGACCGCGGTGAGCGAGAGA TCGGCGGTGGCGGCGATGAGGGACTCGCAGGGGAGGTCTTGGGATCCGCC TCAGCCGGGTTGGCCGGGACACGGAGACCATGCGCTGAGATCGTCTCGAG GGGGGATGGATTTGGCCTACGGCGCGCGAGCCCGCGTGGTGAGCGTGTCG CAGTAGAGCAGAGGAATTTGAGACGCGTGTGCCAAGAGGTCTGCAAGGCC TCTCTTGTCGCTCTCGCCCTGGTGGAGAGCCGGAGTACTCAGCAATCGCT GCCTGCGTGGTGTGCTCGTTCTTTTTTGTCGGAGGTTTGCGATTGTTTGA GTCGACGGCACTAGGGACGTGCGCATGCGTCTGTCCTTCATGCCGCGTTG CGGTCACCTTCTTGTCGACTAGAGAAGACTTCTTTCGATCTTCCATCTGC ACCATTCCCATCCGTAAGCGTGAACGTCCTCTAGAGTGAGGTGGGACGCG ACGTAGACCTTGCTATCGGTTTCGCTGCGAACAAAAGTACCGCCGATCGA TGAGCGGTGTCCCCCTGCGTCAGAGCCCTCCCTGACGAACCCCGACGAAT GACGTGCTCCCAAGTGCCATCCACCCACACTCGTTTCGTGTCCCTCCCGC CATTCTCGCCTCCGGTGGTTCTTGCTCCGCCGCAGTCCCCCGCGACCTTG CCCAGCCGACCCCAAATGCTGCCGCCGGGTGCCGACACGTACGCTCCGGG GGCGCCCCCGGCTGCAGCAAGGGAGGCTGCCGGCCACCCCGACCAGCGGC TGAGAATGGACGCGGAGGCATCTCTCCCTTCCCTTCCTCCCCCGAGGGAG CCTGCCGACCCGACGGCGGGGTTTTACTCGGCCGCTAACCGGGCGTCCTG GAGGCGGGCTCCTGAGATGGGATCGTGGGAGCCTTCCAGGGCAGGCGGCG GTGATGATTCCCGGGCGCCGCAGCATTACGAGCAGCATCCGGGTTACTAC GACCCCTCGGAGCGGCCGCCTCCTCGTTCCGCGTGGAACAGCCACGGCGG CGGCAGCGGCGGCTATTCGGGAGGAGGAGGCGGACGATACGATTACGGCG ATTACAGGGGAGAAAGAGGAGGACAGGAGCGGCGAGGAGGGGAGAGTGTA GTGGATTGGCAGCTCCCGTCACATGGCGGCGGAGGCGGTGGCGGAGCTGA CGGTTACCGTGACCCATACGATTTCCCGCCGCCTCCGCACGGGTACGAAA GGCGGCTCACGCCCTTGGAGAGGCCGCAGGTTGACGAACGCGAAAAGCGG TATATCGAACAGCCTGGCGGCCAGGTTCTTGTGGGTGCCCCCCACCCCGC TGAACGCGCCGATCGCGGACGATACCAGGCGTACGGTGGCCCGGACGGCC ACCCGTACAAGCGCTCCATCGACCGCCTCGTTTGGTCCGACGCTGGCGGC GGCAGTGGCGGCGACCACGTGGACTTTCAGCAGCAGCGCGGGCGACAGGG CTCTGCCCTGAGCCGTGCGGATTGGGAGCGGGGGGGGCGTGAAGGATTGC AGGCGATGCACTCCTCACCCCACGAGACCCCGCGCGAGACCGCCGCCGGC GAGGGCGGCGGCAGGGGCGGCGGAAGGGGCTCGCCCCGGTGGGAGCTAGA GCACCGGGGGGAAGGCTTCGCCGCGCAGGAGACCCGGCGGCGCGGAGATG AAAACAGCACAGCCGCGCCCCCTTCCTCCCCCGACTACGATCGGCAGACC CGCCGTTCACCCCAGCAGGAGCAGGGGGATGAGGGAAGGGAAAGCTCGCC GCGCCAGGGT
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Coding sequence (CDS) from alignment at P-fluviatile_contig9:56833..62492-

>mRNA_P-fluviatile_contig9.15002.1 ID=mRNA_P-fluviatile_contig9.15002.1|Name=mRNA_P-fluviatile_contig9.15002.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4146bp|location=Sequence derived from alignment at P-fluviatile_contig9:56833..62492- (Porterinema fluviatile SAG_2381)
ATGCAAGACACGAAGGACTCCGATGGCGGAGGCTTAGAAGAGAAGCCGAA
GGCTCCGTCTGAGATGCAAGACACGAAGGACTCCGATGGCGGAGGCTTAG
AAGAGAAGCCGAAGGCTCCGTCTGAGGACAAAACCGTCGAGCTACGCAAG
AGTTGCGACTACTGCGTGAAATTGAAGCGCGCCTGCGACGGCAAGAACCC
ATGCTCGCTGTGCTCCCGCCGCAACAAGCCATGCACGCGCAGCGCCAGAA
AGAAGAGCGGCCCCGCTAAGGGCACCAAGTACGCGCCGCGTCGAAAACGG
CCAATGATGACGGAGTGGCCGGACCACGCTGGCCTCGAGCCGAGGGATCC
TGGCCTTCCGTACCACTTTCCTCCTGGCATGGGCAGCCGTGGTAGACACA
TGCACCCCCATTACCCCATGTCAATTGGGGAAGCGGCGGCGGGCAGAGGC
GTTCCGTATCTCGGCGGCCGGTCCTCGTCGTCGTTCCACCCGGTGCCTTC
CAGGAGGTTGGGCGAGGAGGTGCCGTGGAGAGACGACCCCCTGGCGTCTT
CGCTCTCCCGGCACCAGCAACATGATCGGCGGACGATGGAGATGGGGCGG
TCGGCGGGGCCGCTGTCGTCCTCACAGGCGCCACTTCCACTTCCGATGGG
GTGGTACGCGCCAGGACTGCATGACGAAGCCGAGCCCGGCGGCGGTGGCG
GCTACGGGATGGCCCCCAGGCATCGGATGGAGCCGCCCATGGGGTATGCG
CCTTCCGCGGCAGAGGCGCTCGCTCGAAGACAACAACAGCAGCAGCACCG
TACCCAGCCCGCCCACCCACGCGATGCGTGGTCGGTCTCGCCGCTGGAAG
CGGAGACCGCGGTGAGCGAGAGATCGGCGGTGGCGGCGATGAGGGACTCG
CAGGGGAGGTCTTGGGATCCGCCTCAGCCGGGTTGGCCGGGACACGGAGA
CCATGCGCTGAGATCGTCTCGAGGGGGGATGGATTTGGCCTACGGCGCGC
GAGCCCGCGTGGACAAAACCGTCGAGCTACGCAAGAGTTGCGACTACTGC
GTGAAATTGAAGCGCGCCTGCGACGGCAAGAACCCATGCTCGCTGTGCTC
CCGCCGCAACAAGCCATGCACGCGCAGCGCCAGAAAGAAGAGCGGCCCCG
CTAAGGGCACCAAGTACGCGCCGCGTCGAAAACGGCCAATGATGACGGAG
TGGCCGGACCACGCTGGCCTCGAGCCGAGGGATCCTGGCCTTCCGTACCA
CTTTCCTCCTGGCATGGGCAGCCGTGGTAGACACATGCACCCCCATTACC
CCATGTCAATTGGGGAAGCGGCGGCGGGCAGAGGCGTTCCGTATCTCGGC
GGCCGGTCCTCGTCGTCGTTCCACCCGGTGCCTTCCAGGAGGTTGGGCGA
GGAGGTGCCGTGGAGAGACGACCCCCTGGCGTCTTCGCTCTCCCGGCACC
AGCAACATGATCGGCGGACGATGGAGATGGGGCGGTCGGCGGGGCCGCTG
TCGTCCTCACAGGCGCCACTTCCACTTCCGATGGGGTGGTACGCGCCAGG
ACTGCATGACGAAGCCGAGCCCGGCGGCGGTGGCGGCTACGGGATGGCCC
CCAGGCATCGGATGGAGCCGCCCATGGGGTATGCGCCTTCCGCGGCAGAG
GCGCTCGCTCGAAGACAACAACAGCAGCAGCACCGTACCCAGCCCGCCCA
CCCACGCGATGCGTGGTCGGTCTCGCCGCTGGAAGCGGAGACCGCGGTGA
GCGAGAGATCGGCGGTGGCGGCGATGAGGGACTCGCAGGGGAGGTCTTGG
GATCCGCCTCAGCCGGGTTGGCCGGGACACGGAGACCATGCGCTGAGATC
GTCTCGAGGGGGGATGGATTTGGCCTACGGCGCGCGAGCCCGCGTGTCCC
CCGCGACCTTGCCCAGCCGACCCCAAATGCTGCCGCCGGGTGCCGACACG
TACGCTCCGGGGGCGCCCCCGGCTGCAGCAAGGGAGGCTGCCGGCCACCC
CGACCAGCGGCTGAGAATGGACGCGGAGGCATCTCTCCCTTCCCTTCCTC
CCCCGAGGGAGCCTGCCGACCCGACGGCGGGGTTTTACTCGGCCGCTAAC
CGGGCGTCCTGGAGGCGGGCTCCTGAGATGGGATCGTGGGAGCCTTCCAG
GGCAGGCGGCGGTGATGATTCCCGGGCGCCGCAGCATTACGAGCAGCATC
CGGGTTACTACGACCCCTCGGAGCGGCCGCCTCCTCGTTCCGCGTGGAAC
AGCCACGGCGGCGGCAGCGGCGGCTATTCGGGAGGAGGAGGCGGACGATA
CGATTACGGCGATTACAGGGGAGAAAGAGGAGGACAGGAGCGGCGAGGAG
GGGAGAGTGTAGTGGATTGGCAGCTCCCGTCACATGGCGGCGGAGGCGGT
GGCGGAGCTGACGGTTACCGTGACCCATACGATTTCCCGCCGCCTCCGCA
CGGGTACGAAAGGCGGCTCACGCCCTTGGAGAGGCCGCAGGTTGACGAAC
GCGAAAAGCGGTATATCGAACAGCCTGGCGGCCAGGTTCTTGTGGGTGCC
CCCCACCCCGCTGAACGCGCCGATCGCGGACGATACCAGGCGTACGGTGG
CCCGGACGGCCACCCGTACAAGCGCTCCATCGACCGCCTCGTTTGGTCCG
ACGCTGGCGGCGGCAGTGGCGGCGACCACGTGGACTTTCAGCAGCAGCGC
GGGCGACAGGGCTCTGCCCTGAGCCGTGCGGATTGGGAGCGGGGGGGGCG
TGAAGGATTGCAGGCGATGCACTCCTCACCCCACGAGACCCCGCGCGAGA
CCGCCGCCGGCGAGGGCGGCGGCAGGGGCGGCGGAAGGGGCTCGCCCCGG
TGGGAGCTAGAGCACCGGGGGGAAGGCTTCGCCGCGCAGGAGACCCGGCG
GCGCGGAGATGAAAACAGCACAGCCGCGCCCCCTTCCTCCCCCGACTACG
ATCGGCAGACCCGCCGTTCACCCCAGCAGGAGCAGGGGGATGAGGGAAGG
GAAAGCTCGCCGCGCCAGGGTTCCCCCGCGACCTTGCCCAGCCGACCCCA
AATGCTGCCGCCGGGTGCCGACACGTACGCTCCGGGGGCGCCCCCGGCTG
CAGCAAGGGAGGCTGCCGGCCACCCCGACCAGCGGCTGAGAATGGACGCG
GAGGCATCTCTCCCTTCCCTTCCTCCCCCGAGGGAGCCTGCCGACCCGAC
GGCGGGGTTTTACTCGGCCGCTAACCGGGCGTCCTGGAGGCGGGCTCCTG
AGATGGGATCGTGGGAGCCTTCCAGGGCAGGCGGCGGTGATGATTCCCGG
GCGCCGCAGCATTACGAGCAGCATCCGGGTTACTACGACCCCTCGGAGCG
GCCGCCTCCTCGTTCCGCGTGGAACAGCCACGGCGGCGGCAGCGGCGGCT
ATTCGGGAGGAGGAGGCGGACGATACGATTACGGCGATTACAGGGGAGAA
AGAGGAGGACAGGAGCGGCGAGGAGGGGAGAGTGTAGTGGATTGGCAGCT
CCCGTCACATGGCGGCGGAGGCGGTGGCGGAGCTGACGGTTACCGTGACC
CATACGATTTCCCGCCGCCTCCGCACGGGTACGAAAGGCGGCTCACGCCC
TTGGAGAGGCCGCAGGTTGACGAACGCGAAAAGCGGTATATCGAACAGCC
TGGCGGCCAGGTTCTTGTGGGTGCCCCCCACCCCGCTGAACGCGCCGATC
GCGGACGATACCAGGCGTACGGTGGCCCGGACGGCCACCCGTACAAGCGC
TCCATCGACCGCCTCGTTTGGTCCGACGCTGGCGGCGGCAGTGGCGGCGA
CCACGTGGACTTTCAGCAGCAGCGCGGGCGACAGGGCTCTGCCCTGAGCC
GTGCGGATTGGGAGCGGGGGGGGCGTGAAGGATTGCAGGCGATGCACTCC
TCACCCCACGAGACCCCGCGCGAGACCGCCGCCGGCGAGGGCGGCGGCAG
GGGCGGCGGAAGGGGCTCGCCCCGGTGGGAGCTAGAGCACCGGGGGGAAG
GCTTCGCCGCGCAGGAGACCCGGCGGCGCGGAGATGAAAACAGCACAGCC
GCGCCCCCTTCCTCCCCCGACTACGATCGGCAGACCCGCCGTTCACCCCA
GCAGGAGCAGGGGGATGAGGGAAGGGAAAGCTCGCCGCGCCAGGGT
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