prot_P-fluviatile_contig89.14976.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig89.14976.1
Unique Nameprot_P-fluviatile_contig89.14976.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length122
Homology
BLAST of mRNA_P-fluviatile_contig89.14976.1 vs. uniprot
Match: A0A6B7EVE1_9PHAE (30S ribosomal protein S1 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EVE1_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 7.020e-59
Identity = 97/122 (79.51%), Postives = 108/122 (88.52%), Query Frame = 0
Query:    1 MFLCTATSKFDFNKFGLILSKYSYKVKTNDILAGIVIGVESNYALVDLGLEQVCFLPLTEISISPRPSVEVEPININYVGEFLILSINNKSNRIIISMKRVQSIYLWNRLRQIDFTNITIYA 122
            M L   TSKFDFNKFGLILSKYSYK+KTNDILAGIV+GVESNY LVD+GL+QVCFLPL EISISP    +++ +NINY+GEFLIL+IN  SNRII+SMKRVQSIYLWNRLRQIDF NITIYA
Sbjct:    1 MLLSITTSKFDFNKFGLILSKYSYKIKTNDILAGIVVGVESNYVLVDVGLDQVCFLPLKEISISPITK-KIDLLNINYIGEFLILNINKNSNRIIVSMKRVQSIYLWNRLRQIDFKNITIYA 121          
BLAST of mRNA_P-fluviatile_contig89.14976.1 vs. uniprot
Match: D1J709_ECTSI (Chloroplast 30S ribosomal protein S1 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J709_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 2.750e-58
Identity = 101/122 (82.79%), Postives = 106/122 (86.89%), Query Frame = 0
Query:    1 MFLCTATSKFDFNKFGLILSKYSYKVKTNDILAGIVIGVESNYALVDLGLEQVCFLPLTEISISPRPSVEVEPININYVGEFLILSINNKSNRIIISMKRVQSIYLWNRLRQIDFTNITIYA 122
            M L  ATSKFDFNKFGLILS+YSYKVKTNDILAGI+IGVESNY LVDLGLEQVCFLPL EIS  P  +   E +N+NYVGEFLIL IN KSNRIIISMKRVQSIYLWNRLRQIDF NITIYA
Sbjct:    1 MLLSIATSKFDFNKFGLILSQYSYKVKTNDILAGIIIGVESNYVLVDLGLEQVCFLPLKEISRFPIYN-PTELLNVNYVGEFLILDINKKSNRIIISMKRVQSIYLWNRLRQIDFKNITIYA 121          
BLAST of mRNA_P-fluviatile_contig89.14976.1 vs. uniprot
Match: A0A5A4MJF2_9PHAE (30S ribosomal protein S1 n=5 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A5A4MJF2_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 5.690e-58
Identity = 96/122 (78.69%), Postives = 107/122 (87.70%), Query Frame = 0
Query:    1 MFLCTATSKFDFNKFGLILSKYSYKVKTNDILAGIVIGVESNYALVDLGLEQVCFLPLTEISISPRPSVEVEPININYVGEFLILSINNKSNRIIISMKRVQSIYLWNRLRQIDFTNITIYA 122
            M L   TSKFDFNKFGLILSKYSYKVKT+DILAGI+IG+ESNYALVDLGLEQVCFLPL EISIS   S  ++ +N+N +GEFLIL IN  SNRI++SMKRVQSIYLWNRLRQIDF+NITIYA
Sbjct:    1 MLLYIVTSKFDFNKFGLILSKYSYKVKTDDILAGIIIGIESNYALVDLGLEQVCFLPLKEISISSPISGPIDLLNVNSIGEFLILDINQNSNRIMVSMKRVQSIYLWNRLRQIDFSNITIYA 122          
BLAST of mRNA_P-fluviatile_contig89.14976.1 vs. uniprot
Match: A0A0R6M9B1_UNDPI (30S ribosomal protein S1 n=11 Tax=Laminariales TaxID=2886 RepID=A0A0R6M9B1_UNDPI)

HSP 1 Score: 180 bits (456), Expect = 1.670e-54
Identity = 94/122 (77.05%), Postives = 105/122 (86.07%), Query Frame = 0
Query:    3 LCTATSKFDFNKFGLILSKYSYKVKTNDILAGIVIGVESNYALVDLGLEQVCFLPLTEISISPR--PSVEVEPININYVGEFLILSINNKSNRIIISMKRVQSIYLWNRLRQIDFTNITIYA 122
            L T TSKFDFNKFGLILSKYSY++K NDILAGI+IGVESNYALVDLGLEQ+CFLPL EISI P   PS   E +N N+VGEFLIL I N  NRII+S+KR++SIYLWNRLRQIDFTN+TIYA
Sbjct:    3 LPTVTSKFDFNKFGLILSKYSYQIKKNDILAGIIIGVESNYALVDLGLEQICFLPLKEISIYPTIDPS---ELLNTNFVGEFLILDITNNHNRIIVSLKRLESIYLWNRLRQIDFTNMTIYA 121          
BLAST of mRNA_P-fluviatile_contig89.14976.1 vs. uniprot
Match: A0A1I9LVS8_9PHAE (30S ribosomal protein S1 n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVS8_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 2.360e-54
Identity = 92/122 (75.41%), Postives = 103/122 (84.43%), Query Frame = 0
Query:    1 MFLCTATSKFDFNKFGLILSKYSYKVKTNDILAGIVIGVESNYALVDLGLEQVCFLPLTEISISPRPSVEVEPININYVGEFLILSINNKSNRIIISMKRVQSIYLWNRLRQIDFTNITIYA 122
            M +C   SKFDFNKFGLILSKYSYKVKTNDILAGI+I VESNYALVDLGLE+VCFLP  EISIS   S   + + +NY+GEFLIL +NN SNRII+S+K VQSIYLWNRLRQIDF N+TIYA
Sbjct:    1 MLICVVVSKFDFNKFGLILSKYSYKVKTNDILAGIIIAVESNYALVDLGLEKVCFLPFDEISISTI-SDPSDLLKLNYIGEFLILDMNNNSNRIIVSIKGVQSIYLWNRLRQIDFANLTIYA 121          
BLAST of mRNA_P-fluviatile_contig89.14976.1 vs. uniprot
Match: A0A8F0FAQ9_9PHAE (Ribosomal protein S1 n=2 Tax=Ecklonia TaxID=105406 RepID=A0A8F0FAQ9_9PHAE)

HSP 1 Score: 177 bits (448), Expect = 2.710e-53
Identity = 89/120 (74.17%), Postives = 104/120 (86.67%), Query Frame = 0
Query:    3 LCTATSKFDFNKFGLILSKYSYKVKTNDILAGIVIGVESNYALVDLGLEQVCFLPLTEISISPRPSVEVEPININYVGEFLILSINNKSNRIIISMKRVQSIYLWNRLRQIDFTNITIYA 122
            L T TSKFDFNKFGLILSKYSY++K NDILAGI+IG+ESNYALVDLGLEQ+CFLPL EISI P  +   E +N N+VGEFLIL I N  +RII+S+KR++SIYLWNRLRQ+DFTN+TIYA
Sbjct:    3 LPTVTSKFDFNKFGLILSKYSYQIKKNDILAGIIIGLESNYALVDLGLEQICFLPLKEISIYPLVNTR-ELLNTNFVGEFLILDITNNHSRIIVSLKRLESIYLWNRLRQLDFTNMTIYA 121          
BLAST of mRNA_P-fluviatile_contig89.14976.1 vs. uniprot
Match: A0A5B9RE09_9PHAE (30S ribosomal protein S1 n=2 Tax=Laminariales TaxID=2886 RepID=A0A5B9RE09_9PHAE)

HSP 1 Score: 174 bits (442), Expect = 2.180e-52
Identity = 89/122 (72.95%), Postives = 103/122 (84.43%), Query Frame = 0
Query:    1 MFLCTATSKFDFNKFGLILSKYSYKVKTNDILAGIVIGVESNYALVDLGLEQVCFLPLTEISISPRPSVEVEPININYVGEFLILSINNKSNRIIISMKRVQSIYLWNRLRQIDFTNITIYA 122
            M + T TSK DFNKFGLILSKYSY++K NDILAGI+IG+ESNYALVDLGLEQ+CFLPL EISI P      E +N N+VGEFLI  I N S+RII+S+KR++SIYLWNRLRQIDFTN+TIYA
Sbjct:    1 MSIPTVTSKLDFNKFGLILSKYSYQIKKNDILAGIIIGIESNYALVDLGLEQICFLPLKEISIYPTMDPR-ELLNTNFVGEFLIFDIINNSSRIIVSLKRLESIYLWNRLRQIDFTNMTIYA 121          
BLAST of mRNA_P-fluviatile_contig89.14976.1 vs. uniprot
Match: A0A8F0F8H5_MACPY (Ribosomal protein S1 n=13 Tax=Laminariales TaxID=2886 RepID=A0A8F0F8H5_MACPY)

HSP 1 Score: 172 bits (435), Expect = 2.640e-51
Identity = 87/120 (72.50%), Postives = 101/120 (84.17%), Query Frame = 0
Query:    3 LCTATSKFDFNKFGLILSKYSYKVKTNDILAGIVIGVESNYALVDLGLEQVCFLPLTEISISPRPSVEVEPININYVGEFLILSINNKSNRIIISMKRVQSIYLWNRLRQIDFTNITIYA 122
            L T TSKFDFNKFGLILSKYSY++K NDILAGI+IG+ESNYALVDLGLEQ+CFLP+ EISI P      E +N N+V EFLIL I N  +RII+S+KR++SIYLWNRLRQIDF N+TIYA
Sbjct:    3 LTTVTSKFDFNKFGLILSKYSYQIKKNDILAGIIIGIESNYALVDLGLEQICFLPIKEISIYPTIDPR-ELLNSNFVSEFLILDITNDHSRIIVSLKRLESIYLWNRLRQIDFPNMTIYA 121          
BLAST of mRNA_P-fluviatile_contig89.14976.1 vs. uniprot
Match: A0A8F0F7Y6_9PHAE (Ribosomal protein S1 n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F7Y6_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 4.730e-51
Identity = 85/125 (68.00%), Postives = 106/125 (84.80%), Query Frame = 0
Query:    1 MFLCTATSKFDFNKFGLILSKYSYKVKTNDILAGIVIGVESNYALVDLGLEQVCFLPLTEISISPRPSVEVEP---ININYVGEFLILSINNKSNRIIISMKRVQSIYLWNRLRQIDFTNITIYA 122
            M L   TSKFDFNKFGLILSKYSY++K NDILAGI+IG+ESNYALVDLGL+Q+CFLP+ E++I     + V+P   +NIN++GEFLIL+I    +RII+S+KR++SIYLWNRLRQ+DFTNITIYA
Sbjct:    1 MLLSIVTSKFDFNKFGLILSKYSYQIKKNDILAGIIIGIESNYALVDLGLDQICFLPIEELAIY----LTVDPHKLLNINFIGEFLILNITKNQSRIILSLKRIESIYLWNRLRQLDFTNITIYA 121          
BLAST of mRNA_P-fluviatile_contig89.14976.1 vs. uniprot
Match: A0A8F0F9U3_9PHAE (Ribosomal protein S1 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9U3_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 5.300e-51
Identity = 86/120 (71.67%), Postives = 100/120 (83.33%), Query Frame = 0
Query:    3 LCTATSKFDFNKFGLILSKYSYKVKTNDILAGIVIGVESNYALVDLGLEQVCFLPLTEISISPRPSVEVEPININYVGEFLILSINNKSNRIIISMKRVQSIYLWNRLRQIDFTNITIYA 122
            L    S FDFNKFGL+LSKYSY+ K NDILAGIVIG+ESNYALVD GLEQ+CFLPL EISI P   +  E +NIN++GEF IL I N+ NRIIIS++R++SIYLWNRLRQIDF+NITIYA
Sbjct:    3 LSIVPSTFDFNKFGLLLSKYSYQAKKNDILAGIVIGIESNYALVDFGLEQICFLPLKEISICPTLDLR-EFLNINFIGEFSILDITNRQNRIIISLRRIESIYLWNRLRQIDFSNITIYA 121          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig89.14976.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6B7EVE1_9PHAE7.020e-5979.5130S ribosomal protein S1 n=1 Tax=Cladosiphon okamu... [more]
D1J709_ECTSI2.750e-5882.79Chloroplast 30S ribosomal protein S1 n=2 Tax=Ectoc... [more]
A0A5A4MJF2_9PHAE5.690e-5878.6930S ribosomal protein S1 n=5 Tax=Scytosiphonaceae ... [more]
A0A0R6M9B1_UNDPI1.670e-5477.0530S ribosomal protein S1 n=11 Tax=Laminariales Tax... [more]
A0A1I9LVS8_9PHAE2.360e-5475.4130S ribosomal protein S1 n=1 Tax=Pleurocladia lacu... [more]
A0A8F0FAQ9_9PHAE2.710e-5374.17Ribosomal protein S1 n=2 Tax=Ecklonia TaxID=105406... [more]
A0A5B9RE09_9PHAE2.180e-5272.9530S ribosomal protein S1 n=2 Tax=Laminariales TaxI... [more]
A0A8F0F8H5_MACPY2.640e-5172.50Ribosomal protein S1 n=13 Tax=Laminariales TaxID=2... [more]
A0A8F0F7Y6_9PHAE4.730e-5168.00Ribosomal protein S1 n=2 Tax=Laminariales TaxID=28... [more]
A0A8F0F9U3_9PHAE5.300e-5171.67Ribosomal protein S1 n=1 Tax=Chorda asiatica TaxID... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022967RNA-binding domain, S1SMARTSM00316S1_6coord: 27..99
e-value: 8.6E-4
score: 28.6
NoneNo IPR availableGENE3D2.40.50.140coord: 14..112
e-value: 1.7E-11
score: 45.8
NoneNo IPR availablePANTHERPTHR10724:SF9coord: 5..120
NoneNo IPR availablePANTHERPTHR10724S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1coord: 5..120
IPR003029S1 domainPFAMPF00575S1coord: 25..99
e-value: 4.8E-7
score: 30.0
IPR003029S1 domainPROSITEPS50126S1coord: 29..99
score: 9.919
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 24..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig89contigP-fluviatile_contig89:73024..73389 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig89.14976.1mRNA_P-fluviatile_contig89.14976.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig89 73003..73389 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig89.14976.1 ID=prot_P-fluviatile_contig89.14976.1|Name=mRNA_P-fluviatile_contig89.14976.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=122bp
MFLCTATSKFDFNKFGLILSKYSYKVKTNDILAGIVIGVESNYALVDLGL
EQVCFLPLTEISISPRPSVEVEPININYVGEFLILSINNKSNRIIISMKR
VQSIYLWNRLRQIDFTNITIYA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022967S1_dom
IPR003029S1_domain
IPR012340NA-bd_OB-fold