mRNA_P-fluviatile_contig89.14976.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig89.14976.1 vs. uniprot
Match: A0A6B7EVE1_9PHAE (30S ribosomal protein S1 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EVE1_9PHAE) HSP 1 Score: 192 bits (489), Expect = 2.310e-59 Identity = 97/122 (79.51%), Postives = 108/122 (88.52%), Query Frame = 1
Query: 22 MFLCTATSKFDFNKFGLILSKYSYKVKTNDILAGIVIGVESNYALVDLGLEQVCFLPLTEISISPRPSVEVEPININYVGEFLILSINNKSNRIIISMKRVQSIYLWNRLRQIDFTNITIYA 387
M L TSKFDFNKFGLILSKYSYK+KTNDILAGIV+GVESNY LVD+GL+QVCFLPL EISISP +++ +NINY+GEFLIL+IN SNRII+SMKRVQSIYLWNRLRQIDF NITIYA
Sbjct: 1 MLLSITTSKFDFNKFGLILSKYSYKIKTNDILAGIVVGVESNYVLVDVGLDQVCFLPLKEISISPITK-KIDLLNINYIGEFLILNINKNSNRIIVSMKRVQSIYLWNRLRQIDFKNITIYA 121
BLAST of mRNA_P-fluviatile_contig89.14976.1 vs. uniprot
Match: D1J709_ECTSI (Chloroplast 30S ribosomal protein S1 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J709_ECTSI) HSP 1 Score: 191 bits (485), Expect = 9.030e-59 Identity = 101/122 (82.79%), Postives = 106/122 (86.89%), Query Frame = 1
Query: 22 MFLCTATSKFDFNKFGLILSKYSYKVKTNDILAGIVIGVESNYALVDLGLEQVCFLPLTEISISPRPSVEVEPININYVGEFLILSINNKSNRIIISMKRVQSIYLWNRLRQIDFTNITIYA 387
M L ATSKFDFNKFGLILS+YSYKVKTNDILAGI+IGVESNY LVDLGLEQVCFLPL EIS P + E +N+NYVGEFLIL IN KSNRIIISMKRVQSIYLWNRLRQIDF NITIYA
Sbjct: 1 MLLSIATSKFDFNKFGLILSQYSYKVKTNDILAGIIIGVESNYVLVDLGLEQVCFLPLKEISRFPIYN-PTELLNVNYVGEFLILDINKKSNRIIISMKRVQSIYLWNRLRQIDFKNITIYA 121
BLAST of mRNA_P-fluviatile_contig89.14976.1 vs. uniprot
Match: A0A5A4MJF2_9PHAE (30S ribosomal protein S1 n=5 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A5A4MJF2_9PHAE) HSP 1 Score: 190 bits (483), Expect = 1.870e-58 Identity = 96/122 (78.69%), Postives = 107/122 (87.70%), Query Frame = 1
Query: 22 MFLCTATSKFDFNKFGLILSKYSYKVKTNDILAGIVIGVESNYALVDLGLEQVCFLPLTEISISPRPSVEVEPININYVGEFLILSINNKSNRIIISMKRVQSIYLWNRLRQIDFTNITIYA 387
M L TSKFDFNKFGLILSKYSYKVKT+DILAGI+IG+ESNYALVDLGLEQVCFLPL EISIS S ++ +N+N +GEFLIL IN SNRI++SMKRVQSIYLWNRLRQIDF+NITIYA
Sbjct: 1 MLLYIVTSKFDFNKFGLILSKYSYKVKTDDILAGIIIGIESNYALVDLGLEQVCFLPLKEISISSPISGPIDLLNVNSIGEFLILDINQNSNRIMVSMKRVQSIYLWNRLRQIDFSNITIYA 122
BLAST of mRNA_P-fluviatile_contig89.14976.1 vs. uniprot
Match: A0A0R6M9B1_UNDPI (30S ribosomal protein S1 n=11 Tax=Laminariales TaxID=2886 RepID=A0A0R6M9B1_UNDPI) HSP 1 Score: 181 bits (460), Expect = 5.480e-55 Identity = 95/124 (76.61%), Postives = 106/124 (85.48%), Query Frame = 1
Query: 22 MFLCTATSKFDFNKFGLILSKYSYKVKTNDILAGIVIGVESNYALVDLGLEQVCFLPLTEISISPR--PSVEVEPININYVGEFLILSINNKSNRIIISMKRVQSIYLWNRLRQIDFTNITIYA 387
M L T TSKFDFNKFGLILSKYSY++K NDILAGI+IGVESNYALVDLGLEQ+CFLPL EISI P PS E +N N+VGEFLIL I N NRII+S+KR++SIYLWNRLRQIDFTN+TIYA
Sbjct: 1 MPLPTVTSKFDFNKFGLILSKYSYQIKKNDILAGIIIGVESNYALVDLGLEQICFLPLKEISIYPTIDPS---ELLNTNFVGEFLILDITNNHNRIIVSLKRLESIYLWNRLRQIDFTNMTIYA 121
BLAST of mRNA_P-fluviatile_contig89.14976.1 vs. uniprot
Match: A0A1I9LVS8_9PHAE (30S ribosomal protein S1 n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVS8_9PHAE) HSP 1 Score: 181 bits (459), Expect = 7.770e-55 Identity = 92/122 (75.41%), Postives = 103/122 (84.43%), Query Frame = 1
Query: 22 MFLCTATSKFDFNKFGLILSKYSYKVKTNDILAGIVIGVESNYALVDLGLEQVCFLPLTEISISPRPSVEVEPININYVGEFLILSINNKSNRIIISMKRVQSIYLWNRLRQIDFTNITIYA 387
M +C SKFDFNKFGLILSKYSYKVKTNDILAGI+I VESNYALVDLGLE+VCFLP EISIS S + + +NY+GEFLIL +NN SNRII+S+K VQSIYLWNRLRQIDF N+TIYA
Sbjct: 1 MLICVVVSKFDFNKFGLILSKYSYKVKTNDILAGIIIAVESNYALVDLGLEKVCFLPFDEISISTI-SDPSDLLKLNYIGEFLILDMNNNSNRIIVSIKGVQSIYLWNRLRQIDFANLTIYA 121
BLAST of mRNA_P-fluviatile_contig89.14976.1 vs. uniprot
Match: A0A8F0FAQ9_9PHAE (Ribosomal protein S1 n=2 Tax=Ecklonia TaxID=105406 RepID=A0A8F0FAQ9_9PHAE) HSP 1 Score: 178 bits (452), Expect = 8.890e-54 Identity = 90/122 (73.77%), Postives = 105/122 (86.07%), Query Frame = 1
Query: 22 MFLCTATSKFDFNKFGLILSKYSYKVKTNDILAGIVIGVESNYALVDLGLEQVCFLPLTEISISPRPSVEVEPININYVGEFLILSINNKSNRIIISMKRVQSIYLWNRLRQIDFTNITIYA 387
M L T TSKFDFNKFGLILSKYSY++K NDILAGI+IG+ESNYALVDLGLEQ+CFLPL EISI P + E +N N+VGEFLIL I N +RII+S+KR++SIYLWNRLRQ+DFTN+TIYA
Sbjct: 1 MPLPTVTSKFDFNKFGLILSKYSYQIKKNDILAGIIIGLESNYALVDLGLEQICFLPLKEISIYPLVNTR-ELLNTNFVGEFLILDITNNHSRIIVSLKRLESIYLWNRLRQLDFTNMTIYA 121
BLAST of mRNA_P-fluviatile_contig89.14976.1 vs. uniprot
Match: A0A5B9RE09_9PHAE (30S ribosomal protein S1 n=2 Tax=Laminariales TaxID=2886 RepID=A0A5B9RE09_9PHAE) HSP 1 Score: 176 bits (446), Expect = 7.170e-53 Identity = 89/122 (72.95%), Postives = 103/122 (84.43%), Query Frame = 1
Query: 22 MFLCTATSKFDFNKFGLILSKYSYKVKTNDILAGIVIGVESNYALVDLGLEQVCFLPLTEISISPRPSVEVEPININYVGEFLILSINNKSNRIIISMKRVQSIYLWNRLRQIDFTNITIYA 387
M + T TSK DFNKFGLILSKYSY++K NDILAGI+IG+ESNYALVDLGLEQ+CFLPL EISI P E +N N+VGEFLI I N S+RII+S+KR++SIYLWNRLRQIDFTN+TIYA
Sbjct: 1 MSIPTVTSKLDFNKFGLILSKYSYQIKKNDILAGIIIGIESNYALVDLGLEQICFLPLKEISIYPTMDPR-ELLNTNFVGEFLIFDIINNSSRIIVSLKRLESIYLWNRLRQIDFTNMTIYA 121
BLAST of mRNA_P-fluviatile_contig89.14976.1 vs. uniprot
Match: A0A8F0F8H5_MACPY (Ribosomal protein S1 n=13 Tax=Laminariales TaxID=2886 RepID=A0A8F0F8H5_MACPY) HSP 1 Score: 173 bits (439), Expect = 8.670e-52 Identity = 88/122 (72.13%), Postives = 102/122 (83.61%), Query Frame = 1
Query: 22 MFLCTATSKFDFNKFGLILSKYSYKVKTNDILAGIVIGVESNYALVDLGLEQVCFLPLTEISISPRPSVEVEPININYVGEFLILSINNKSNRIIISMKRVQSIYLWNRLRQIDFTNITIYA 387
M L T TSKFDFNKFGLILSKYSY++K NDILAGI+IG+ESNYALVDLGLEQ+CFLP+ EISI P E +N N+V EFLIL I N +RII+S+KR++SIYLWNRLRQIDF N+TIYA
Sbjct: 1 MPLTTVTSKFDFNKFGLILSKYSYQIKKNDILAGIIIGIESNYALVDLGLEQICFLPIKEISIYPTIDPR-ELLNSNFVSEFLILDITNDHSRIIVSLKRLESIYLWNRLRQIDFPNMTIYA 121
BLAST of mRNA_P-fluviatile_contig89.14976.1 vs. uniprot
Match: A0A8F0F7Y6_9PHAE (Ribosomal protein S1 n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F7Y6_9PHAE) HSP 1 Score: 172 bits (437), Expect = 1.550e-51 Identity = 85/125 (68.00%), Postives = 106/125 (84.80%), Query Frame = 1
Query: 22 MFLCTATSKFDFNKFGLILSKYSYKVKTNDILAGIVIGVESNYALVDLGLEQVCFLPLTEISISPRPSVEVEP---ININYVGEFLILSINNKSNRIIISMKRVQSIYLWNRLRQIDFTNITIYA 387
M L TSKFDFNKFGLILSKYSY++K NDILAGI+IG+ESNYALVDLGL+Q+CFLP+ E++I + V+P +NIN++GEFLIL+I +RII+S+KR++SIYLWNRLRQ+DFTNITIYA
Sbjct: 1 MLLSIVTSKFDFNKFGLILSKYSYQIKKNDILAGIIIGIESNYALVDLGLDQICFLPIEELAIY----LTVDPHKLLNINFIGEFLILNITKNQSRIILSLKRIESIYLWNRLRQLDFTNITIYA 121
BLAST of mRNA_P-fluviatile_contig89.14976.1 vs. uniprot
Match: A0A8F0F9U3_9PHAE (Ribosomal protein S1 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9U3_9PHAE) HSP 1 Score: 172 bits (437), Expect = 1.740e-51 Identity = 87/122 (71.31%), Postives = 101/122 (82.79%), Query Frame = 1
Query: 22 MFLCTATSKFDFNKFGLILSKYSYKVKTNDILAGIVIGVESNYALVDLGLEQVCFLPLTEISISPRPSVEVEPININYVGEFLILSINNKSNRIIISMKRVQSIYLWNRLRQIDFTNITIYA 387
M L S FDFNKFGL+LSKYSY+ K NDILAGIVIG+ESNYALVD GLEQ+CFLPL EISI P + E +NIN++GEF IL I N+ NRIIIS++R++SIYLWNRLRQIDF+NITIYA
Sbjct: 1 MPLSIVPSTFDFNKFGLLLSKYSYQAKKNDILAGIVIGIESNYALVDFGLEQICFLPLKEISICPTLDLR-EFLNINFIGEFSILDITNRQNRIIISLRRIESIYLWNRLRQIDFSNITIYA 121 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig89.14976.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig89.14976.1 >prot_P-fluviatile_contig89.14976.1 ID=prot_P-fluviatile_contig89.14976.1|Name=mRNA_P-fluviatile_contig89.14976.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=122bp MFLCTATSKFDFNKFGLILSKYSYKVKTNDILAGIVIGVESNYALVDLGLback to top mRNA from alignment at P-fluviatile_contig89:73003..73389+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig89.14976.1 ID=mRNA_P-fluviatile_contig89.14976.1|Name=mRNA_P-fluviatile_contig89.14976.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=387bp|location=Sequence derived from alignment at P-fluviatile_contig89:73003..73389+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig89:73003..73389+ >mRNA_P-fluviatile_contig89.14976.1 ID=mRNA_P-fluviatile_contig89.14976.1|Name=mRNA_P-fluviatile_contig89.14976.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=732bp|location=Sequence derived from alignment at P-fluviatile_contig89:73003..73389+ (Porterinema fluviatile SAG_2381)back to top |