prot_P-fluviatile_contig89.14969.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig89.14969.1
Unique Nameprot_P-fluviatile_contig89.14969.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length37
Homology
BLAST of mRNA_P-fluviatile_contig89.14969.1 vs. uniprot
Match: A0A0R6ME26_UNDPI (50S ribosomal protein L13, chloroplastic n=27 Tax=Laminariales TaxID=2886 RepID=A0A0R6ME26_UNDPI)

HSP 1 Score: 63.9 bits (154), Expect = 7.840e-12
Identity = 30/35 (85.71%), Postives = 32/35 (91.43%), Query Frame = 0
Query:    1 MLPKNRLGRKIFMKLKVYKGEEHPHMSQNLKKIEL 35
            MLPKNRLGRK+F KLKVYKGEEHPHMSQ  +KIEL
Sbjct:  109 MLPKNRLGRKLFTKLKVYKGEEHPHMSQKPQKIEL 143          
BLAST of mRNA_P-fluviatile_contig89.14969.1 vs. uniprot
Match: A0A7T8G5D9_SCYLO (50S ribosomal protein L13, chloroplastic n=5 Tax=Ectocarpales TaxID=2877 RepID=A0A7T8G5D9_SCYLO)

HSP 1 Score: 63.5 bits (153), Expect = 1.110e-11
Identity = 30/35 (85.71%), Postives = 31/35 (88.57%), Query Frame = 0
Query:    1 MLPKNRLGRKIFMKLKVYKGEEHPHMSQNLKKIEL 35
            MLPKNRLGRK+F KLKVYKGEEHPHMSQ  K IEL
Sbjct:  109 MLPKNRLGRKLFTKLKVYKGEEHPHMSQKPKNIEL 143          
BLAST of mRNA_P-fluviatile_contig89.14969.1 vs. uniprot
Match: A0A8F0F9Q3_9PHAE (Ribosomal protein L13 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9Q3_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 2.210e-11
Identity = 29/35 (82.86%), Postives = 32/35 (91.43%), Query Frame = 0
Query:    1 MLPKNRLGRKIFMKLKVYKGEEHPHMSQNLKKIEL 35
            MLPKNRLGRK+F KLKVYKG+EHPHMSQ  +KIEL
Sbjct:  109 MLPKNRLGRKLFTKLKVYKGQEHPHMSQKPQKIEL 143          
BLAST of mRNA_P-fluviatile_contig89.14969.1 vs. uniprot
Match: A0A1I9LVW0_9PHAE (50S ribosomal protein L13, chloroplastic n=2 Tax=Ectocarpales TaxID=2877 RepID=A0A1I9LVW0_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 1.790e-10
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 0
Query:    1 MLPKNRLGRKIFMKLKVYKGEEHPHMSQNLKKIELK 36
            MLPKN LGRK+F KLKVYKG+EHPHM+Q  K IELK
Sbjct:  109 MLPKNHLGRKLFTKLKVYKGKEHPHMAQKPKNIELK 144          
BLAST of mRNA_P-fluviatile_contig89.14969.1 vs. uniprot
Match: A0A660WXU7_9BACT (50S ribosomal protein L13 n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A660WXU7_9BACT)

HSP 1 Score: 60.5 bits (145), Expect = 1.820e-10
Identity = 27/35 (77.14%), Postives = 31/35 (88.57%), Query Frame = 0
Query:    1 MLPKNRLGRKIFMKLKVYKGEEHPHMSQNLKKIEL 35
            MLPKNRLGRKIF KLKVY+G EHPH +QN +KIE+
Sbjct:  109 MLPKNRLGRKIFKKLKVYRGNEHPHQAQNPRKIEI 143          
BLAST of mRNA_P-fluviatile_contig89.14969.1 vs. uniprot
Match: A0A8F0JZV9_9PHAE (Ribosomal protein L13 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZV9_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 4.930e-10
Identity = 28/35 (80.00%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    1 MLPKNRLGRKIFMKLKVYKGEEHPHMSQNLKKIEL 35
            MLPKNRLGRK+F KLKVYKG EHPHMSQ  + IEL
Sbjct:  109 MLPKNRLGRKLFTKLKVYKGPEHPHMSQKPQTIEL 143          
BLAST of mRNA_P-fluviatile_contig89.14969.1 vs. uniprot
Match: A0A497B1Z0_9CHLR (50S ribosomal protein L13 n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A497B1Z0_9CHLR)

HSP 1 Score: 58.2 bits (139), Expect = 2.110e-9
Identity = 26/35 (74.29%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    1 MLPKNRLGRKIFMKLKVYKGEEHPHMSQNLKKIEL 35
            MLPKNRLGRK+F KLKVY GEEHPH +Q  KK+E+
Sbjct:  133 MLPKNRLGRKMFKKLKVYAGEEHPHQAQKPKKLEI 167          
BLAST of mRNA_P-fluviatile_contig89.14969.1 vs. uniprot
Match: UPI0004859460 (50S ribosomal protein L13 n=1 Tax=Halonatronum saccharophilum TaxID=150060 RepID=UPI0004859460)

HSP 1 Score: 56.6 bits (135), Expect = 5.580e-9
Identity = 25/35 (71.43%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    1 MLPKNRLGRKIFMKLKVYKGEEHPHMSQNLKKIEL 35
            MLPKN+LGRK+F KLKVY GE+HPH +Q  KK+EL
Sbjct:  110 MLPKNKLGRKMFKKLKVYAGEQHPHQAQEPKKLEL 144          
BLAST of mRNA_P-fluviatile_contig89.14969.1 vs. uniprot
Match: A0A661J4T6_9DELT (50S ribosomal protein L13 n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661J4T6_9DELT)

HSP 1 Score: 55.5 bits (132), Expect = 1.510e-8
Identity = 25/35 (71.43%), Postives = 29/35 (82.86%), Query Frame = 0
Query:    1 MLPKNRLGRKIFMKLKVYKGEEHPHMSQNLKKIEL 35
            MLPKNRLGRK+F KLKVYKG+ HPH +Q  K IE+
Sbjct:  108 MLPKNRLGRKLFKKLKVYKGDSHPHTAQQPKAIEV 142          
BLAST of mRNA_P-fluviatile_contig89.14969.1 vs. uniprot
Match: A0A7C4RHW4_9BACT (50S ribosomal protein L13 n=1 Tax=Synergistetes bacterium TaxID=2268202 RepID=A0A7C4RHW4_9BACT)

HSP 1 Score: 55.5 bits (132), Expect = 1.650e-8
Identity = 25/35 (71.43%), Postives = 29/35 (82.86%), Query Frame = 0
Query:    1 MLPKNRLGRKIFMKLKVYKGEEHPHMSQNLKKIEL 35
            MLPKNRLGRK+F KLKVY+GEEHPH  Q  + +EL
Sbjct:  111 MLPKNRLGRKMFKKLKVYRGEEHPHQPQKPEPLEL 145          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig89.14969.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0R6ME26_UNDPI7.840e-1285.7150S ribosomal protein L13, chloroplastic n=27 Tax=... [more]
A0A7T8G5D9_SCYLO1.110e-1185.7150S ribosomal protein L13, chloroplastic n=5 Tax=E... [more]
A0A8F0F9Q3_9PHAE2.210e-1182.86Ribosomal protein L13 n=1 Tax=Chorda asiatica TaxI... [more]
A0A1I9LVW0_9PHAE1.790e-1077.7850S ribosomal protein L13, chloroplastic n=2 Tax=E... [more]
A0A660WXU7_9BACT1.820e-1077.1450S ribosomal protein L13 n=1 Tax=Candidatus Marin... [more]
A0A8F0JZV9_9PHAE4.930e-1080.00Ribosomal protein L13 n=1 Tax=Desmarestia aculeata... [more]
A0A497B1Z0_9CHLR2.110e-974.2950S ribosomal protein L13 n=2 Tax=Chloroflexi TaxI... [more]
UPI00048594605.580e-971.4350S ribosomal protein L13 n=1 Tax=Halonatronum sac... [more]
A0A661J4T6_9DELT1.510e-871.4350S ribosomal protein L13 n=1 Tax=Deltaproteobacte... [more]
A0A7C4RHW4_9BACT1.650e-871.4350S ribosomal protein L13 n=1 Tax=Synergistetes ba... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005822Ribosomal protein L13PFAMPF00572Ribosomal_L13coord: 1..29
e-value: 4.0E-8
score: 33.5
IPR036899Ribosomal protein L13 superfamilyGENE3D3.90.1180.10coord: 1..35
e-value: 4.7E-10
score: 41.2
IPR036899Ribosomal protein L13 superfamilySUPERFAMILY52161Ribosomal protein L13coord: 1..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig89contigP-fluviatile_contig89:56540..56650 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig89.14969.1mRNA_P-fluviatile_contig89.14969.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig89 56396..57196 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig89.14969.1 ID=prot_P-fluviatile_contig89.14969.1|Name=mRNA_P-fluviatile_contig89.14969.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=37bp
MLPKNRLGRKIFMKLKVYKGEEHPHMSQNLKKIELK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005822Ribosomal_L13
IPR036899Ribosomal_L13_sf