prot_P-fluviatile_contig8.14688.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig8.14688.1
Unique Nameprot_P-fluviatile_contig8.14688.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length116
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig8.14688.1 vs. uniprot
Match: D7G2S2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2S2_ECTSI)

HSP 1 Score: 164 bits (416), Expect = 1.570e-50
Identity = 85/114 (74.56%), Postives = 97/114 (85.09%), Query Frame = 0 
Query:    1 MKFLGFFLVCLTAVSGFVAPS-PRLSTAVRGSSPSTPMRMGIKEDVQTAINTAAITVLTAAPAFATEGTGEPLGFENKEAVIVPLFILGVINAAFNSWSKKQPEGDFFSEYDQR 113
            MKFLGFF+VCLTAVSGFVAP+ PRLS AVR S+ +TPMRMG+KEDVQ   N A++ VLTAAPA ATEGTGEPLGFEN +AVIVPLF L  IN  FN+W+K QPEGDFF+EYD+R
Sbjct:    1 MKFLGFFVVCLTAVSGFVAPTGPRLSAAVRPSTAATPMRMGLKEDVQKVANAASVAVLTAAPALATEGTGEPLGFENSQAVIVPLFFLVSINLLFNNWAKDQPEGDFFAEYDER 114
[Close]
BLAST of mRNA_P-fluviatile_contig8.14688.1 vs. uniprot
Match: A0A7V5M5A5_9BACT (Uncharacterized protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V5M5A5_9BACT)

HSP 1 Score: 52.0 bits (123), Expect = 5.180e-6
Identity = 31/74 (41.89%), Postives = 46/74 (62.16%), Query Frame = 0 
Query:   48 AINTAAITVLTA-----APAFATEGTGEPLGFENKEAVIVPLFILGVINAAFNSWSKKQPEGD-FFSEYDQRQK 115
            A+  +A+T LT+     + A+AT+GTGEPLG ++   +IV L +   +   F SWS KQ +GD F  EYD R++
Sbjct:   61 AVPVSAVTTLTSWMTLGSAAWATDGTGEPLGIDDSRLLIVLLGVFITMLVLFISWSSKQDDGDDFVGEYDPRRR 134
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14688.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2S2_ECTSI1.570e-5074.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7V5M5A5_9BACT5.180e-641.89Uncharacterized protein n=1 Tax=bacterium TaxID=18... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..115
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.792
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 79..98
NoneNo IPR availableTMHMMTMhelixcoord: 47..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:3830285..3833775 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14688.1mRNA_P-fluviatile_contig8.14688.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig8 3829345..3833819 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig8.14688.1 ID=prot_P-fluviatile_contig8.14688.1|Name=mRNA_P-fluviatile_contig8.14688.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=116bp
MKFLGFFLVCLTAVSGFVAPSPRLSTAVRGSSPSTPMRMGIKEDVQTAIN
TAAITVLTAAPAFATEGTGEPLGFENKEAVIVPLFILGVINAAFNSWSKK
QPEGDFFSEYDQRQK*
back to top