mRNA_P-fluviatile_contig8.14575.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14575.1 vs. uniprot
Match: D8LHG7_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHG7_ECTSI) HSP 1 Score: 559 bits (1440), Expect = 8.010e-190 Identity = 342/556 (61.51%), Postives = 385/556 (69.24%), Query Frame = 1
Query: 517 SMQSSRTVQSAARGFKKAKNTALLTLRIGEYVVKTQLVRPVVKKATHEWKSFNRYRGRHQLERRSKTLDWFEERVQAMHREEEMKKQREQDTRRAKWRGHLKKERSRQQAVDFLNETRAEFKQRADLSLATSLQKEKARNYFLDHNDEWQMQTLTRHVQESEDRHRQREEDAVADKVREGDALRQAADDEYLAEYDRAEVITQTTLRIMRRSGIIAGVNAPPAGVEEPPLETDTYLLLRLRPEQPSVNVDASEKETTGAKTGGDDTGRQDPAPPGVGKARQSNNGSSXXXXXXXXAGSTLPHLV-AGR-SGICDIPRVDRLKTVQNSTTFGPKTPGLEAGPAA---AAEGRKXXXXXXXXXXARGRSGRGG-HNRGKKRSSGAFEVDLLCFRSVEEIRAAKLGIPGGESLAADLASGACPRLAVLRLGWCCLGDRGTRAVVRSLCGGGGASAAGRTLRELDLRGNAVTVAGLRVIGAALASGGVPALRALDLGSNSLRDEGGRAVAHRLLAGAGTWPRLVRLDLSGNGMGDIGVEAVFKAVTAPGVRLDPDVEVVS 2166
S+ SS T +SA+RGFKK K +A+LTLRIGEYVVKTQ+V PVV K EWK FNR+R RHQ ERR+KTLDWFE+RV M REEE +QR+Q+ RR K R L NETRAEFK +ADL L TSL+KE+ R+YFLD+ND WQMQ LTRHVQE E +KVR+GDA RQAA DEYLAEYDR EVITQ TLRIMRRSGI+AGVNAPPA ++E PLETDTYLLLRL+P P G+G RQS+ AG H AGR + + ++P + ++VQ + TP AGP A AAEGRK RG GR G HNRGKKRSS AFEVDLL FR VEE+R KLG PGGESLA+DLASGACPRL+VLRLGWC LGDRG A+VR+LCGGGGASAAGRTLR LDLRGNAVT GLRV+ LA GG+PALRALDLGSNSLRDEGG+AVAHRLLAGAGTW RL RLDLSGNGMG+ GVEAVFKAVTAPGV L PDVE +S
Sbjct: 2 SIGSSETAKSASRGFKKVKKSAMLTLRIGEYVVKTQVVAPVVTKVVQEWKGFNRFRDRHQAERRNKTLDWFEDRVATMRREEENMRQRKQEQRRTKRRAQLXXXXXXXXXXXXXNETRAEFKHQADLRLTTSLEKERVRDYFLDNNDGWQMQALTRHVQEDEXXXXXXXXXXXXEKVRQGDANRQAAADEYLAEYDRGEVITQATLRIMRRSGIVAGVNAPPAEIKEEPLETDTYLLLRLKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLGIGGIRQSSGTGGSKPPAFPAAGERNGHHQRAGRQTAVTEMPGKNSSRSVQPVQSVE-ATPNNGAGPTAGPVAAEGRKPSRGGGI----RGGGGRAGNHNRGKKRSSQAFEVDLLRFRGVEEMRGWKLGAPGGESLASDLASGACPRLSVLRLGWCLLGDRGACAIVRALCGGGGASAAGRTLRTLDLRGNAVTAVGLRVLAGPLAFGGLPALRALDLGSNSLRDEGGKAVAHRLLAGAGTWRRLTRLDLSGNGMGNGGVEAVFKAVTAPGVTLAPDVEFIS 552 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14575.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14575.1 >prot_P-fluviatile_contig8.14575.1 ID=prot_P-fluviatile_contig8.14575.1|Name=mRNA_P-fluviatile_contig8.14575.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=723bp GDGNADESRKKADRSVALKDLRDQKYTVPLLPHVEASAPDGLSDKSGSFGback to top mRNA from alignment at P-fluviatile_contig8:2796325..2801016- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14575.1 ID=mRNA_P-fluviatile_contig8.14575.1|Name=mRNA_P-fluviatile_contig8.14575.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4692bp|location=Sequence derived from alignment at P-fluviatile_contig8:2796325..2801016- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:2796325..2801016- >mRNA_P-fluviatile_contig8.14575.1 ID=mRNA_P-fluviatile_contig8.14575.1|Name=mRNA_P-fluviatile_contig8.14575.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4338bp|location=Sequence derived from alignment at P-fluviatile_contig8:2796325..2801016- (Porterinema fluviatile SAG_2381)back to top |