prot_P-fluviatile_contig8.14575.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig8.14575.1
Unique Nameprot_P-fluviatile_contig8.14575.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length723
Homology
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BLAST of mRNA_P-fluviatile_contig8.14575.1 vs. uniprot
Match: D8LHG7_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHG7_ECTSI)

HSP 1 Score: 559 bits (1440), Expect = 8.010e-190
Identity = 342/556 (61.51%), Postives = 385/556 (69.24%), Query Frame = 0 
Query:  173 SMQSSRTVQSAARGFKKAKNTALLTLRIGEYVVKTQLVRPVVKKATHEWKSFNRYRGRHQLERRSKTLDWFEERVQAMHREEEMKKQREQDTRRAKWRGHLKKERSRQQAVDFLNETRAEFKQRADLSLATSLQKEKARNYFLDHNDEWQMQTLTRHVQESEDRHRQREEDAVADKVREGDALRQAADDEYLAEYDRAEVITQTTLRIMRRSGIIAGVNAPPAGVEEPPLETDTYLLLRLRPEQPSVNVDASEKETTGAKTGGDDTGRQDPAPPGVGKARQSNNGSSXXXXXXXXAGSTLPHLV-AGR-SGICDIPRVDRLKTVQNSTTFGPKTPGLEAGPAA---AAEGRKXXXXXXXXXXARGRSGRGG-HNRGKKRSSGAFEVDLLCFRSVEEIRAAKLGIPGGESLAADLASGACPRLAVLRLGWCCLGDRGTRAVVRSLCGGGGASAAGRTLRELDLRGNAVTVAGLRVIGAALASGGVPALRALDLGSNSLRDEGGRAVAHRLLAGAGTWPRLVRLDLSGNGMGDIGVEAVFKAVTAPGVRLDPDVEVVS 722
            S+ SS T +SA+RGFKK K +A+LTLRIGEYVVKTQ+V PVV K   EWK FNR+R RHQ ERR+KTLDWFE+RV  M REEE  +QR+Q+ RR K R  L             NETRAEFK +ADL L TSL+KE+ R+YFLD+ND WQMQ LTRHVQE E            +KVR+GDA RQAA DEYLAEYDR EVITQ TLRIMRRSGI+AGVNAPPA ++E PLETDTYLLLRL+P                              P G+G  RQS+            AG    H   AGR + + ++P  +  ++VQ   +    TP   AGP A   AAEGRK           RG  GR G HNRGKKRSS AFEVDLL FR VEE+R  KLG PGGESLA+DLASGACPRL+VLRLGWC LGDRG  A+VR+LCGGGGASAAGRTLR LDLRGNAVT  GLRV+   LA GG+PALRALDLGSNSLRDEGG+AVAHRLLAGAGTW RL RLDLSGNGMG+ GVEAVFKAVTAPGV L PDVE +S
Sbjct:    2 SIGSSETAKSASRGFKKVKKSAMLTLRIGEYVVKTQVVAPVVTKVVQEWKGFNRFRDRHQAERRNKTLDWFEDRVATMRREEENMRQRKQEQRRTKRRAQLXXXXXXXXXXXXXNETRAEFKHQADLRLTTSLEKERVRDYFLDNNDGWQMQALTRHVQEDEXXXXXXXXXXXXEKVRQGDANRQAAADEYLAEYDRGEVITQATLRIMRRSGIVAGVNAPPAEIKEEPLETDTYLLLRLKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLGIGGIRQSSGTGGSKPPAFPAAGERNGHHQRAGRQTAVTEMPGKNSSRSVQPVQSVE-ATPNNGAGPTAGPVAAEGRKPSRGGGI----RGGGGRAGNHNRGKKRSSQAFEVDLLRFRGVEEMRGWKLGAPGGESLASDLASGACPRLSVLRLGWCLLGDRGACAIVRALCGGGGASAAGRTLRTLDLRGNAVTAVGLRVLAGPLAFGGLPALRALDLGSNSLRDEGGKAVAHRLLAGAGTWRRLTRLDLSGNGMGNGGVEAVFKAVTAPGVTLAPDVEFIS 552
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14575.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHG7_ECTSI8.010e-19061.51Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 650..677
e-value: 0.31
score: 20.1
coord: 620..647
e-value: 1.7E-4
score: 30.9
coord: 585..612
e-value: 110.0
score: 2.8
coord: 682..709
e-value: 2.1
score: 14.8
NoneNo IPR availablePANTHERPTHR24113FAMILY NOT NAMEDcoord: 621..708
NoneNo IPR availablePANTHERPTHR24113:SF5RAN GTPASE-ACTIVATING PROTEINcoord: 621..708
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 583..708
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 653..672
e-value: 0.04
score: 14.0
coord: 684..703
e-value: 0.016
score: 15.2
coord: 621..640
e-value: 0.19
score: 11.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 562..716
e-value: 3.2E-22
score: 80.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:2796325..2801016 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14575.1mRNA_P-fluviatile_contig8.14575.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig8 2796325..2801016 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig8.14575.1 ID=prot_P-fluviatile_contig8.14575.1|Name=mRNA_P-fluviatile_contig8.14575.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=723bp
GDGNADESRKKADRSVALKDLRDQKYTVPLLPHVEASAPDGLSDKSGSFG
GSGTMTTTTSTAGSTSSTSLSTSTSTSTLSASTASGSTSTGGGATLSSSG
FSLEASLDPNDVIDPRTGRHIFAKTAREVKITTLPSENPPPTLSVDPPLE
KLSSIAAQATHAISVGMHTARSSMQSSRTVQSAARGFKKAKNTALLTLRI
GEYVVKTQLVRPVVKKATHEWKSFNRYRGRHQLERRSKTLDWFEERVQAM
HREEEMKKQREQDTRRAKWRGHLKKERSRQQAVDFLNETRAEFKQRADLS
LATSLQKEKARNYFLDHNDEWQMQTLTRHVQESEDRHRQREEDAVADKVR
EGDALRQAADDEYLAEYDRAEVITQTTLRIMRRSGIIAGVNAPPAGVEEP
PLETDTYLLLRLRPEQPSVNVDASEKETTGAKTGGDDTGRQDPAPPGVGK
ARQSNNGSSSGSSSGNGAGSTLPHLVAGRSGICDIPRVDRLKTVQNSTTF
GPKTPGLEAGPAAAAEGRKSSSRGGGGGGARGRSGRGGHNRGKKRSSGAF
EVDLLCFRSVEEIRAAKLGIPGGESLAADLASGACPRLAVLRLGWCCLGD
RGTRAVVRSLCGGGGASAAGRTLRELDLRGNAVTVAGLRVIGAALASGGV
PALRALDLGSNSLRDEGGRAVAHRLLAGAGTWPRLVRLDLSGNGMGDIGV
EAVFKAVTAPGVRLDPDVEVVSV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf