prot_P-fluviatile_contig75.14008.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig75.14008.1
Unique Nameprot_P-fluviatile_contig75.14008.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length172
Homology
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BLAST of mRNA_P-fluviatile_contig75.14008.1 vs. uniprot
Match: D8LRE0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRE0_ECTSI)

HSP 1 Score: 254 bits (650), Expect = 2.060e-84
Identity = 128/164 (78.05%), Postives = 144/164 (87.80%), Query Frame = 0 
Query:    1 MSEEAKTSDVTVTAPKPHMHADTAPKVDKYHQSAT-LPKVVPPRGSKDARSFRPSTLAEINMMNRYEPLEMKCGGKTYGIGCGNSLEDVLLICGCILALWSFILGVTGLLVKSAIDTDRGHTALWVYFWLFILGVGMLIGMIATGQVERFRNEAVEAEKQHEED 163
            MSEEAKT++V V+ PK  +HADT  +V K+ QS   +PKVVPPRGSKDARSFRPSTLAEINMMNRYEPLE+KCGGKT+GIGCGNSLEDVLLI GCILALWSF+LGV+GLL+KSAIDTD  HTALWVYFWLFILG  +L GMIATGQVERFR+E   AEKQH++D
Sbjct:    1 MSEEAKTNEVAVSMPKADIHADTQQEVSKFDQSKNPIPKVVPPRGSKDARSFRPSTLAEINMMNRYEPLELKCGGKTFGIGCGNSLEDVLLIMGCILALWSFVLGVSGLLLKSAIDTDLRHTALWVYFWLFILGCFLLGGMIATGQVERFRSERAAAEKQHDDD 164
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig75.14008.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRE0_ECTSI2.060e-8478.05Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 146..166
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 111..121
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 88..110
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 143..171
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..87
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 122..142
NoneNo IPR availableTMHMMTMhelixcoord: 88..110
NoneNo IPR availableTMHMMTMhelixcoord: 120..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig75contigP-fluviatile_contig75:96839..99692 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig75.14008.1mRNA_P-fluviatile_contig75.14008.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig75 96839..101492 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig75.14008.1 ID=prot_P-fluviatile_contig75.14008.1|Name=mRNA_P-fluviatile_contig75.14008.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=172bp
MSEEAKTSDVTVTAPKPHMHADTAPKVDKYHQSATLPKVVPPRGSKDARS
FRPSTLAEINMMNRYEPLEMKCGGKTYGIGCGNSLEDVLLICGCILALWS
FILGVTGLLVKSAIDTDRGHTALWVYFWLFILGVGMLIGMIATGQVERFR
NEAVEAEKQHEEDEEKAALTA*
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