prot_P-fluviatile_contig7.13480.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig7.13480.1
Unique Nameprot_P-fluviatile_contig7.13480.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length178
Homology
BLAST of mRNA_P-fluviatile_contig7.13480.1 vs. uniprot
Match: D7FME6_ECTSI (Similar to mitochondrial import inner membrane translocase,TIM17/22/23-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME6_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 1.350e-64
Identity = 114/169 (67.46%), Postives = 127/169 (75.15%), Query Frame = 0
Query:    1 MGDWVADPAE-TPDAYSANCASRAAEGFYVGALYGTVWGFIGRAYSSPVFPSTPEMGGRSPEPTAEPKPARGASGGQPARNLLRALGRSAAGYGAATASTAGVFGVFVGIVNAGTCACERFRGKKDWINNMCGGAAAGLSVALLSRHTRSPRMVAAHVAGAAAITSVVA 168
            M DW  +P E T   Y+ +C+SRAAEGFYVGALYG VWG IGRA  +P  PSTP MG   P    + +PA G      +R + RA GR AAGYG A ASTAGVFGVFVG+VNAGTC CER RGKKDW NN  GGAAAGLSVALLSRHTR+P+M+AAHVAGAAAITSVVA
Sbjct:    1 MEDWNVEPPEMTHKDYAPDCSSRAAEGFYVGALYGAVWGVIGRAAHAPTLPSTPAMGELKPPSGLQAQPAPGLETRGVSRQV-RAFGRGAAGYGIAAASTAGVFGVFVGMVNAGTCGCERLRGKKDWFNNAFGGAAAGLSVALLSRHTRTPQMLAAHVAGAAAITSVVA 168          
BLAST of mRNA_P-fluviatile_contig7.13480.1 vs. uniprot
Match: A0A7S2MQ39_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MQ39_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.170e-10
Identity = 53/154 (34.42%), Postives = 72/154 (46.75%), Query Frame = 0
Query:   19 CASRAAEGFYVGALYGTVWGFIGRAYSSPVFPSTPEMGGRSPEPTAEPKPARGASGGQPARNLLRALGRSAAGYGAATASTAGVFGVFVGIVNAGTCACERFRGKKDWINNMCGGAAAGLSVALLSRHTRSPRMVAAHVAGAAAITSVVAIATG 172
            C S+ A+G   G L G VWG +        F  T      +P  +  P  ++    G   R  L ++GRS+ G           FG+F+GI NA +C  E+ RGKKDW+N+M GG AAG    L S    SPRM      G   +TS+  +  G
Sbjct:   23 CGSKFADGAARGLLIGLVWGAV--------FDVTSLHEPATPHRSNPPCSSQTILWGSKVRPALYSMGRSSIG-----------FGLFLGIFNAISCNSEKIRGKKDWMNSMFGGFAAGTFAGLGSG---SPRMTFISALGTGTVTSLFYVVQG 154          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig7.13480.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FME6_ECTSI1.350e-6467.46Similar to mitochondrial import inner membrane tra... [more]
A0A7S2MQ39_9STRA1.170e-1034.42Mitochondrial import inner membrane translocase su... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF02466Tim17coord: 19..162
e-value: 2.1E-16
score: 60.3
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..88
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 115..125
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 89..114
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 153..172
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 145..152
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 173..177
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 126..144
NoneNo IPR availableTMHMMTMhelixcoord: 153..175
NoneNo IPR availableTMHMMTMhelixcoord: 89..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig7contigP-fluviatile_contig7:568706..571825 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig7.13480.1mRNA_P-fluviatile_contig7.13480.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig7 568302..573824 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig7.13480.1 ID=prot_P-fluviatile_contig7.13480.1|Name=mRNA_P-fluviatile_contig7.13480.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=178bp
MGDWVADPAETPDAYSANCASRAAEGFYVGALYGTVWGFIGRAYSSPVFP
STPEMGGRSPEPTAEPKPARGASGGQPARNLLRALGRSAAGYGAATASTA
GVFGVFVGIVNAGTCACERFRGKKDWINNMCGGAAAGLSVALLSRHTRSP
RMVAAHVAGAAAITSVVAIATGPPVGS*
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