prot_P-fluviatile_contig7.13484.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig7.13484.1
Unique Nameprot_P-fluviatile_contig7.13484.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length159
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig7.13484.1 vs. uniprot
Match: A0A6H5JI88_9PHAE (Myb-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI88_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 6.390e-17
Identity = 79/134 (58.96%), Postives = 88/134 (65.67%), Query Frame = 0 
Query:   13 GHGIQPQAPL--AAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVA-VVPTVPAHIVAANLSTQVRALLSRAPGAAGVAG--TAQWAEVLRLNPQLAAQVQAVL-RTDTTDTSKVEALAGLFSAIR 140
            GHGIQPQAPL  +AG           XXXXXXXXXXXXXXX          GVA   PT PA  +AANLS+QVRALLSRAP   G AG  T Q  E LRL+PQL A++QA + RTDTTD  KVEALA + SA+R
Sbjct:  851 GHGIQPQAPLPVSAGQQPLQQGGSVGXXXXXXXXXXXXXXXAPAGVALAAGGVAGAAPTSPAQNLAANLSSQVRALLSRAPNMPGAAGGSTNQVLEALRLHPQLTAKIQATIHRTDTTDAQKVEALASMLSAVR 984
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig7.13484.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JI88_9PHAE6.390e-1758.96Myb-like domain-containing protein n=1 Tax=Ectocar... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig7contigP-fluviatile_contig7:614763..618140 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig7.13484.1mRNA_P-fluviatile_contig7.13484.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig7 614763..618577 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig7.13484.1 ID=prot_P-fluviatile_contig7.13484.1|Name=mRNA_P-fluviatile_contig7.13484.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=159bp
HRQLQAAAQAVTGHGIQPQAPLAAGAAAAASAATAAATASSPVPTPAVAG
GGLVGAGAPAPGVAVVPTVPAHIVAANLSTQVRALLSRAPGAAGVAGTAQ
WAEVLRLNPQLAAQVQAVLRTDTTDTSKVEALAGLFSAIRPDAVTASAGV
AGAPGAGT*
back to top