prot_P-fluviatile_contig11.1310.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig11.1310.1
Unique Nameprot_P-fluviatile_contig11.1310.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length389
Homology
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BLAST of mRNA_P-fluviatile_contig11.1310.1 vs. uniprot
Match: A0A6H5JTH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTH5_9PHAE)

HSP 1 Score: 540 bits (1391), Expect = 3.050e-190
Identity = 287/384 (74.74%), Postives = 324/384 (84.38%), Query Frame = 0 
Query:    1 MRYSTAPAIFAAISWLVQRADGFV-APPSCTRRCGSASVHPPPD-----LHNSAAHERSVFPGLARTLPGRKRRVPTAMSADEGAGWAPVPDALNMKAGTCGSPEEMMRQMSIPDLARKLDEAESIFGQMHPQVATALIPLSQALYANGDFGPARESCTRALRILQTAYGQTPSVEMAEGLHTLAMIQQAESPEIGDKALGSQNMAYELALRACGPESIEVAAYARCLAQMSEEYSQYLSPGLPRPFYMPNPVPLYRQTLAIIERVVGPDDPSVASALDDLASSLLFHRDDNYTDMKAVTLLPEAEALATRSLAISRASLGEEHLITAGREHNLGMVKRGLQKPKEALDCFRRALAIREKVLGPDHPDTKSSRDLVKEEESNPA 378
            MRYST PA+  A SWL  RAD FV APPS   +  S+  +         L  +A    SV   LAR +P  KRR+ TAM+ ++GA WAP+P+  NM+ GT  +PEEMMRQMSIPDLA+KLD+AES FGQ+HPQVA ALIPLSQALYANGD GPAR+SCTRAL+ILQ AY + PSVEMAE LHTLAMIQQAESPE+GDKALGSQNMA ELA+R  GP+S+EVAAYARCLAQMSE+YSQ+LSPGLPRPFYMPNP+PLYRQTL+IIE+V+GP DPSVASALDDLAS+LLFHRDD+YT+MKAVTLLPEAE LATRSLAISRASLGEEH ITAGREHNLGM+KRGLQKPKE+LDCFRRALAIREKVLG DHPDTKSSR+LV+EEES  A
Sbjct:    1 MRYSTTPAMLVA-SWLANRADAFVVAPPSHGAKWRSSRQNXXXXXXXXXLSVTAVRRCSVGSSLARVVPRLKRRMSTAMNTNDGARWAPIPNVPNMEGGT--NPEEMMRQMSIPDLAQKLDQAESTFGQVHPQVAAALIPLSQALYANGDLGPARQSCTRALQILQRAYKERPSVEMAEALHTLAMIQQAESPEVGDKALGSQNMALELAMRVFGPDSVEVAAYARCLAQMSEDYSQFLSPGLPRPFYMPNPIPLYRQTLSIIEKVIGPKDPSVASALDDLASALLFHRDDDYTEMKAVTLLPEAETLATRSLAISRASLGEEHPITAGREHNLGMIKRGLQKPKESLDCFRRALAIREKVLGVDHPDTKSSRELVEEEESGTA 381
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BLAST of mRNA_P-fluviatile_contig11.1310.1 vs. uniprot
Match: D7FQU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQU3_ECTSI)

HSP 1 Score: 477 bits (1228), Expect = 6.310e-167
Identity = 243/289 (84.08%), Postives = 267/289 (92.39%), Query Frame = 0 
Query:   90 MKAGTCGSPEEMMRQMSIPDLARKLDEAESIFGQMHPQVATALIPLSQALYANGDFGPARESCTRALRILQTAYGQTPSVEMAEGLHTLAMIQQAESPEIGDKALGSQNMAYELALRACGPESIEVAAYARCLAQMSEEYSQYLSPGLPRPFYMPNPVPLYRQTLAIIERVVGPDDPSVASALDDLASSLLFHRDDNYTDMKAVTLLPEAEALATRSLAISRASLGEEHLITAGREHNLGMVKRGLQKPKEALDCFRRALAIREKVLGPDHPDTKSSRDLVKEEESNPA 378
            MK G    PEEMMRQMSIPDLA+KLD+AES FGQ+HPQVA ALIPLSQALYANGD GPAR+SCTRAL+ILQ AY + PSVEMAE LHTLAMIQQAESPE+GDKALGSQNMA ELA+R  GP+S+EVAAYARCLAQMSE+YSQ+LSPGLPRPFYMPNP+PLYRQTL+IIE+V+GP DPSVASALDDLAS+LLFHRDD+YT+MKAVTLLPEAE LA RSLAISRASLGEEH ITAGREHNLGM+KRGLQKPKE+LDCFRRALAIREKVLG DHPD+KSSR+LV+EEES  A
Sbjct:    1 MKGGA--DPEEMMRQMSIPDLAQKLDQAESTFGQVHPQVAAALIPLSQALYANGDLGPARQSCTRALQILQMAYKERPSVEMAEALHTLAMIQQAESPEVGDKALGSQNMALELAMRVFGPDSVEVAAYARCLAQMSEDYSQFLSPGLPRPFYMPNPIPLYRQTLSIIEKVIGPKDPSVASALDDLASALLFHRDDDYTEMKAVTLLPEAETLAARSLAISRASLGEEHPITAGREHNLGMIKRGLQKPKESLDCFRRALAIREKVLGVDHPDSKSSRELVEEEESGTA 287
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BLAST of mRNA_P-fluviatile_contig11.1310.1 vs. uniprot
Match: A0A6H5LI51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LI51_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 1.320e-5
Identity = 46/132 (34.85%), Postives = 68/132 (51.52%), Query Frame = 0 
Query:  249 LYRQTLAIIERVVGPDDPSVASALDDLA-----SSLLFHRDDNY---TDMKAVTLLPEAEALATRSLAISRASLGEEHLITAGREHNLGMVKRG----------LQKPKEALDCFRRALAIREKVLGPDHPD 362
            LY+++L+I E+V GPD P VA+ L+++A      +  +   D +   T  K V  +P    L  +SL I   +LG EH   A   +NL  V R           L+  ++A   + R+LAI EKV GPDHP+
Sbjct:   15 LYKRSLSIDEKVYGPDHPEVAADLNNMAVLMESQARRWGSSDKFLGSTSGKCVEAVP----LHRQSLGIREKTLGPEHPDVAESLNNLAGVLRSQASVNPVFEILRNFQDAEPLYERSLAIDEKVYGPDHPE 142
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BLAST of mRNA_P-fluviatile_contig11.1310.1 vs. uniprot
Match: UPI0012FA3430 (tetratricopeptide repeat protein n=1 Tax=Micromonospora rosaria TaxID=47874 RepID=UPI0012FA3430)

HSP 1 Score: 51.6 bits (122), Expect = 3.600e-5
Identity = 26/54 (48.15%), Postives = 34/54 (62.96%), Query Frame = 0 
Query:  326 HNLGMVKRGLQKPKEALDCFRRALAIREKVLGPDHPDTKSSRDLVKEEESNPAA 379
            HNL    R   +  EA+  + R LA RE+VLGPDHPDT++SRDL+    +  AA
Sbjct:    9 HNLAGCYRATGRIAEAVALYERVLAAREQVLGPDHPDTRASRDLLTRSRAEAAA 62
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1310.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JTH5_9PHAE3.050e-19074.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQU3_ECTSI6.310e-16784.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LI51_9PHAE1.320e-534.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0012FA34303.600e-548.15tetratricopeptide repeat protein n=1 Tax=Micromono... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 129..162
e-value: 66.0
score: 7.8
coord: 322..355
e-value: 0.35
score: 20.0
NoneNo IPR availablePFAMPF13424TPR_12coord: 297..354
e-value: 1.3E-10
score: 41.4
NoneNo IPR availablePANTHERPTHR45641:SF3NEPHROCYSTIN-3coord: 247..368
coord: 85..185
NoneNo IPR availablePANTHERPTHR45641FAMILY NOT NAMEDcoord: 247..368
coord: 85..185
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..388
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.527
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 86..232
e-value: 2.7E-10
score: 42.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 242..372
e-value: 9.5E-28
score: 99.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 249..362
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 113..353

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig11contigP-fluviatile_contig11:3674242..3677710 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig11.1310.1mRNA_P-fluviatile_contig11.1310.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig11 3673595..3677782 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig11.1310.1 ID=prot_P-fluviatile_contig11.1310.1|Name=mRNA_P-fluviatile_contig11.1310.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=389bp
MRYSTAPAIFAAISWLVQRADGFVAPPSCTRRCGSASVHPPPDLHNSAAH
ERSVFPGLARTLPGRKRRVPTAMSADEGAGWAPVPDALNMKAGTCGSPEE
MMRQMSIPDLARKLDEAESIFGQMHPQVATALIPLSQALYANGDFGPARE
SCTRALRILQTAYGQTPSVEMAEGLHTLAMIQQAESPEIGDKALGSQNMA
YELALRACGPESIEVAAYARCLAQMSEEYSQYLSPGLPRPFYMPNPVPLY
RQTLAIIERVVGPDDPSVASALDDLASSLLFHRDDNYTDMKAVTLLPEAE
ALATRSLAISRASLGEEHLITAGREHNLGMVKRGLQKPKEALDCFRRALA
IREKVLGPDHPDTKSSRDLVKEEESNPAAISGSQQESA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf