mRNA_P-fluviatile_contig11.1310.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig11.1310.1 vs. uniprot
Match: A0A6H5JTH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTH5_9PHAE) HSP 1 Score: 542 bits (1396), Expect = 3.340e-187 Identity = 287/384 (74.74%), Postives = 324/384 (84.38%), Query Frame = 1
Query: 73 MRYSTAPAIFAAISWLVQRADGFV-APPSCTRRCGSASVHPPPD-----LHNSAAHERSVFPGLARTLPGRKRRVPTAMSADEGAGWAPVPDALNMKAGTCGSPEEMMRQMSIPDLARKLDEAESIFGQMHPQVATALIPLSQALYANGDFGPARESCTRALRILQTAYGQTPSVEMAEGLHTLAMIQQAESPEIGDKALGSQNMAYELALRACGPESIEVAAYARCLAQMSEEYSQYLSPGLPRPFYMPNPVPLYRQTLAIIERVVGPDDPSVASALDDLASSLLFHRDDNYTDMKAVTLLPEAEALATRSLAISRASLGEEHLITAGREHNLGMVKRGLQKPKEALDCFRRALAIREKVLGPDHPDTKSSRDLVKEEESNPA 1206
MRYST PA+ A SWL RAD FV APPS + S+ + L +A SV LAR +P KRR+ TAM+ ++GA WAP+P+ NM+ GT +PEEMMRQMSIPDLA+KLD+AES FGQ+HPQVA ALIPLSQALYANGD GPAR+SCTRAL+ILQ AY + PSVEMAE LHTLAMIQQAESPE+GDKALGSQNMA ELA+R GP+S+EVAAYARCLAQMSE+YSQ+LSPGLPRPFYMPNP+PLYRQTL+IIE+V+GP DPSVASALDDLAS+LLFHRDD+YT+MKAVTLLPEAE LATRSLAISRASLGEEH ITAGREHNLGM+KRGLQKPKE+LDCFRRALAIREKVLG DHPDTKSSR+LV+EEES A
Sbjct: 1 MRYSTTPAMLVA-SWLANRADAFVVAPPSHGAKWRSSRQNXXXXXXXXXLSVTAVRRCSVGSSLARVVPRLKRRMSTAMNTNDGARWAPIPNVPNMEGGT--NPEEMMRQMSIPDLAQKLDQAESTFGQVHPQVAAALIPLSQALYANGDLGPARQSCTRALQILQRAYKERPSVEMAEALHTLAMIQQAESPEVGDKALGSQNMALELAMRVFGPDSVEVAAYARCLAQMSEDYSQFLSPGLPRPFYMPNPIPLYRQTLSIIEKVIGPKDPSVASALDDLASALLFHRDDDYTEMKAVTLLPEAETLATRSLAISRASLGEEHPITAGREHNLGMIKRGLQKPKESLDCFRRALAIREKVLGVDHPDTKSSRELVEEEESGTA 381
BLAST of mRNA_P-fluviatile_contig11.1310.1 vs. uniprot
Match: D7FQU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQU3_ECTSI) HSP 1 Score: 478 bits (1229), Expect = 2.170e-163 Identity = 243/289 (84.08%), Postives = 267/289 (92.39%), Query Frame = 1
Query: 340 MKAGTCGSPEEMMRQMSIPDLARKLDEAESIFGQMHPQVATALIPLSQALYANGDFGPARESCTRALRILQTAYGQTPSVEMAEGLHTLAMIQQAESPEIGDKALGSQNMAYELALRACGPESIEVAAYARCLAQMSEEYSQYLSPGLPRPFYMPNPVPLYRQTLAIIERVVGPDDPSVASALDDLASSLLFHRDDNYTDMKAVTLLPEAEALATRSLAISRASLGEEHLITAGREHNLGMVKRGLQKPKEALDCFRRALAIREKVLGPDHPDTKSSRDLVKEEESNPA 1206
MK G PEEMMRQMSIPDLA+KLD+AES FGQ+HPQVA ALIPLSQALYANGD GPAR+SCTRAL+ILQ AY + PSVEMAE LHTLAMIQQAESPE+GDKALGSQNMA ELA+R GP+S+EVAAYARCLAQMSE+YSQ+LSPGLPRPFYMPNP+PLYRQTL+IIE+V+GP DPSVASALDDLAS+LLFHRDD+YT+MKAVTLLPEAE LA RSLAISRASLGEEH ITAGREHNLGM+KRGLQKPKE+LDCFRRALAIREKVLG DHPD+KSSR+LV+EEES A
Sbjct: 1 MKGGA--DPEEMMRQMSIPDLAQKLDQAESTFGQVHPQVAAALIPLSQALYANGDLGPARQSCTRALQILQMAYKERPSVEMAEALHTLAMIQQAESPEVGDKALGSQNMALELAMRVFGPDSVEVAAYARCLAQMSEDYSQFLSPGLPRPFYMPNPIPLYRQTLSIIEKVIGPKDPSVASALDDLASALLFHRDDDYTEMKAVTLLPEAETLAARSLAISRASLGEEHPITAGREHNLGMIKRGLQKPKESLDCFRRALAIREKVLGVDHPDSKSSRELVEEEESGTA 287
BLAST of mRNA_P-fluviatile_contig11.1310.1 vs. uniprot
Match: A0A6H5LI51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LI51_9PHAE) HSP 1 Score: 57.8 bits (138), Expect = 2.930e-5 Identity = 46/132 (34.85%), Postives = 68/132 (51.52%), Query Frame = 1
Query: 817 LYRQTLAIIERVVGPDDPSVASALDDLA-----SSLLFHRDDNY---TDMKAVTLLPEAEALATRSLAISRASLGEEHLITAGREHNLGMVKRG----------LQKPKEALDCFRRALAIREKVLGPDHPD 1158
LY+++L+I E+V GPD P VA+ L+++A + + D + T K V +P L +SL I +LG EH A +NL V R L+ ++A + R+LAI EKV GPDHP+
Sbjct: 15 LYKRSLSIDEKVYGPDHPEVAADLNNMAVLMESQARRWGSSDKFLGSTSGKCVEAVP----LHRQSLGIREKTLGPEHPDVAESLNNLAGVLRSQASVNPVFEILRNFQDAEPLYERSLAIDEKVYGPDHPE 142
BLAST of mRNA_P-fluviatile_contig11.1310.1 vs. uniprot
Match: UPI0012FA3430 (tetratricopeptide repeat protein n=1 Tax=Micromonospora rosaria TaxID=47874 RepID=UPI0012FA3430) HSP 1 Score: 52.0 bits (123), Expect = 4.340e-5 Identity = 26/54 (48.15%), Postives = 34/54 (62.96%), Query Frame = 1
Query: 1048 HNLGMVKRGLQKPKEALDCFRRALAIREKVLGPDHPDTKSSRDLVKEEESNPAA 1209
HNL R + EA+ + R LA RE+VLGPDHPDT++SRDL+ + AA
Sbjct: 9 HNLAGCYRATGRIAEAVALYERVLAAREQVLGPDHPDTRASRDLLTRSRAEAAA 62 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1310.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig11.1310.1 >prot_P-fluviatile_contig11.1310.1 ID=prot_P-fluviatile_contig11.1310.1|Name=mRNA_P-fluviatile_contig11.1310.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=389bp MRYSTAPAIFAAISWLVQRADGFVAPPSCTRRCGSASVHPPPDLHNSAAHback to top mRNA from alignment at P-fluviatile_contig11:3673595..3677782- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig11.1310.1 ID=mRNA_P-fluviatile_contig11.1310.1|Name=mRNA_P-fluviatile_contig11.1310.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4188bp|location=Sequence derived from alignment at P-fluviatile_contig11:3673595..3677782- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig11:3673595..3677782- >mRNA_P-fluviatile_contig11.1310.1 ID=mRNA_P-fluviatile_contig11.1310.1|Name=mRNA_P-fluviatile_contig11.1310.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2334bp|location=Sequence derived from alignment at P-fluviatile_contig11:3673595..3677782- (Porterinema fluviatile SAG_2381)back to top |