mRNA_P-fluviatile_contig11.1266.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig11.1266.1 vs. uniprot
Match: D8LMZ2_ECTSI (COG2350: Uncharacterized protein conserved in bacteria n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMZ2_ECTSI) HSP 1 Score: 726 bits (1874), Expect = 3.300e-249 Identity = 354/475 (74.53%), Postives = 400/475 (84.21%), Query Frame = 3
Query: 1110 GVACRLRTAGQDAGFHA-GGVGGDGCWRSERATRRWRSCLEAIKR-LGAEDGDETLKSKRVPAPKPEDEIRDDDFSDEAMRRLMFDIDPDAEAKGPMYFGDAGMYGEEVNHVKYPEEVRFPQCYLAFCLDRDEAEDEPKNFVTWGVRKQAHWEHLKWARIAKRTFDDDKDREAGILWDRSVLSPSKYRVIGNMFCIRAYTKEGVLRLLEEDPYRKAGLFGTVSLYRYPYDMGGEFNWHLSTFPYLALCMDKKGKGKAKIREENLDAHLKYYGKTRRCIGEGSLFDPNLAEGSPKSKPIGSLMFFNAINDEEAKETAEGDPFNEAGLYDSVFIARFNEVDLSGFGLGKANRIDPMRDIMAKEGLDRECEYPVNTGKYDVFANMKWLQTEVAKKQEQQYMEYRHKLYQQRDRRIERDEINQGVTFRPGVYVYMGKRSENEWYDYWPTKIGPDSSGVDEELFSLEASYPPVDPFEDDM 2528
G A T G D GF A G G G WRS ATRR CL+A LG GD+ L+ K V A PE++ R DD SDEAMRRLMFD+DPD++ KGPMYFGDAGMY +EVNHVKYPEEVRFPQ YLAFC+DR+E EDE KN+VTWGVR +AHWEH+KWARIAKRTF+DD DREAGILW+RSVLSPSK RVIGNMFCIR+YTKEG LRLLEEDPYRK+GLFGTVSLYRYPY+MGG FNWHLS FPYLALCMDKKG AK+RE+N DAHL+YY +TRRCIGEG + +LAE SP++KP+GSLMFFNAINDEEA+ETAEGDPFN+AGLYDSVF+ARFNE+DLSG GL +ANRIDPMRD+MAKEGLDRECEYPV GKYD+F NMKWL+TEV KKQEQQYME+R KLYQQRDRRIER+EIN+G FRPGVYVYMGKR+E EWYDYWPTK GPD+ EE ++++A YPPVD FEDD+
Sbjct: 61 GAAWPCTTDGGDGGFRAVEGGRGVGGWRSHGATRRRSGCLQAKNTPLGDGKGDDLLRLKNVAAAVPEED-RVDDHSDEAMRRLMFDMDPDSKDKGPMYFGDAGMYTDEVNHVKYPEEVRFPQSYLAFCVDREETEDEDKNYVTWGVRAKAHWEHVKWARIAKRTFEDDPDREAGILWNRSVLSPSKCRVIGNMFCIRSYTKEGALRLLEEDPYRKSGLFGTVSLYRYPYNMGGGFNWHLSNFPYLALCMDKKGS--AKLREKNNDAHLEYYERTRRCIGEGPVLSSDLAEDSPRNKPVGSLMFFNAINDEEARETAEGDPFNQAGLYDSVFVARFNEIDLSGIGLVRANRIDPMRDMMAKEGLDRECEYPVKFGKYDLFENMKWLKTEVEKKQEQQYMEHRLKLYQQRDRRIEREEINEGALFRPGVYVYMGKRTETEWYDYWPTKAGPDADAAGEEFYTMDACYPPVDHFEDDL 532
BLAST of mRNA_P-fluviatile_contig11.1266.1 vs. uniprot
Match: A0A6H5JNB6_9PHAE (YCII domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNB6_9PHAE) HSP 1 Score: 648 bits (1672), Expect = 2.630e-219 Identity = 321/490 (65.51%), Postives = 363/490 (74.08%), Query Frame = 3
Query: 1323 DFSDEAMRRLMFDIDPDAEAKGPMYFGDAGMYGEEVNHVKYPEEVRFPQCYLAFCLDRDEAEDEPKNFVTWGVRKQAHWEHLKWARIAKRTFDDDKDREAGILWDRSVLSPSKYRVIGNMFCIRAYTK--------------------------EGVLRLLEEDPYRKAGLFGTVSLYRYPYDMGGEFNWHLSTFPYLALCMDKKGKGKAKIREENLDAHLKYYGKTRR-CIGEGSLFDPNLAEGSPKSKPIGSLMFFNAINDEEAKETAEGDPFNEAGLYDSVFIARFNEVDLSGFGLGKANRIDPMRDIMAKEGLDRECEYPVNTGKYDVFANMKWLQTEVAKKQEQQYMEYRHKLYQQR-------------------------------------------------------------DRRIERDEINQGVTFRPGVYVYMGKRSENEWYDYWPTKIGPDSSGVDEELFSLEASYPPVDPFEDDM 2528
D SDEAMRRLMFD+DPD++ KGPMYFGDAGMY +EVNHVKYPEEVRFPQ YLAFC+DR+E EDE KN+VTWGVR +AHWEH+KWARIAKRTF+DD DREAGILW+RSVLSPSK RVIGNMFCIR+YTK EG LRLLEEDPYRK+GLFGTVSLYRYPY+MGG FNWHLS FPYLALCMDKKGK AK+RE+N DAHL+YY KTRR CIGEG + +LAE SP++KP+GSLMFFNAINDEEA+ETAEGDPFN+AGLYDSVF+ARFNE+DLSG GL +ANRIDPMRD+MA+EGLDRECEYPV GKYD+F NMKWL+TEV KKQEQQYME+R KLYQQR DRRIER+E+N+G FRPGVYVYMGKR+E EWYDYWPTK GPD+ EE ++++A YPPVD FEDD+
Sbjct: 17 DHSDEAMRRLMFDMDPDSKDKGPMYFGDAGMYTDEVNHVKYPEEVRFPQSYLAFCVDREETEDEDKNYVTWGVRAKAHWEHVKWARIAKRTFEDDPDREAGILWNRSVLSPSKCRVIGNMFCIRSYTKASAIHLGYFYVLLRKIGSDEAVAGRKEGALRLLEEDPYRKSGLFGTVSLYRYPYNMGGGFNWHLSNFPYLALCMDKKGK--AKLREKNNDAHLEYYEKTRRRCIGEGPILSSDLAEDSPRNKPVGSLMFFNAINDEEARETAEGDPFNQAGLYDSVFVARFNEIDLSGIGLVRANRIDPMRDMMAQEGLDRECEYPVKFGKYDLFENMKWLKTEVEKKQEQQYMEHRLKLYQQRCVGGGAVVTSADDTPRWYDGMPSYGGRNVRAGTAVKAPVSAAVEGFSDVWLKAAHTVVVARDRRIEREEVNEGALFRPGVYVYMGKRTETEWYDYWPTKAGPDADAAGEEFYTMDACYPPVDHFEDDL 504
BLAST of mRNA_P-fluviatile_contig11.1266.1 vs. uniprot
Match: A0A835ZAP4_9STRA (YCII domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAP4_9STRA) HSP 1 Score: 124 bits (312), Expect = 3.370e-27 Identity = 79/254 (31.10%), Postives = 121/254 (47.64%), Query Frame = 3
Query: 1473 YLAFCLDRDEAEDEPKNFVTWGVRKQAHWEHLKWARIAKRTFDDDKDREAGILWDRSVLSPSKYRVIGNMFCIRAYTKEGVLRLLEEDPYRKAGLFG------TVSLYRYPYDMGGEFNWHLSTFPYLALCMDKKGKGKAKIREENLDAHLKYYGKTRRCIGEGSLFDPNL-AEGSPKSKPIGSLMFFNAINDEEAKETAEGDPFNEAGLYDSVFIARFNEVDLSGFGLGKANRIDPMRDIMAKEGLDRECEYP 2213
YLA CLDRD+A+ + R H+ WAR + R + A +L+ R++L+P R IGN+ I A ++ L +PY AGLF LY +P + E N+ L +PY + MD G R AHL Y +G L G P+GS++F NA + E A+ A+ DP+ AG+++SV + ++D+ G + +DP+RDI+ +EGL + +YP
Sbjct: 88 YLAVCLDRDDADAFAR------ARCPNMIAHVAWARRSTRV----EGARARVLFSRALLAPDMQRTIGNLVGIAAASRADAEALWASEPYTAAGLFAGGGGGAAQLLYAWPRNDHTELNYDLRAYPYAIVAMDANGA--LPTRRATRPAHLAYLTSLGCVVGAAPLLPLGARGGGGAAGDPVGSVVFVNAESAEAARAIADADPYAAAGVFESVRVYALCDIDVEGTSQARPQTVDPVRDILEREGLTTKDDYP 329
BLAST of mRNA_P-fluviatile_contig11.1266.1 vs. uniprot
Match: A0A7S2DFL6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DFL6_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 5.570e-14 Identity = 45/168 (26.79%), Postives = 89/168 (52.98%), Query Frame = 3
Query: 1626 ILWDRSVLSPSKYRVIGNMFCIRAYTKEGVLRLLEEDPYRKAGLFGTVSLYRYPYDMGGEFNWHLSTFPYLALCMDKKGKGKAKIREENLDAHLKYYGKTRRCIGEGSLFDPNLAEGSPKSKPIGSLMFFNAINDEEAKETAEGDPFNEAGLYDSVFIARFNEVDLSG 2129
ILW+RS+ + + G + A ++E + L+ +DPY G+F + ++R+ + E + + P++ LC+DK G R HL++ ++ + G +F G+ + PIGS + A + E A ++ DP+ +AG+++SV I+ ++E+D++G
Sbjct: 49 ILWERSLYEDNDMYIHGCVTGYAAASREELDTLMSKDPYITEGVFSDIQVFRWKQNNDPELRFEPKSAPHVFLCLDKPGM--LATRTATRPDHLEWLQTSKLVMAAGPIFSAESGAGALEDGPIGSFVCAAADDVESAHAWSKEDPYAQAGIFESVRISHYSEMDVTG 214
BLAST of mRNA_P-fluviatile_contig11.1266.1 vs. uniprot
Match: A0A7S2P7F9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P7F9_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 2.190e-8 Identity = 33/100 (33.00%), Postives = 55/100 (55.00%), Query Frame = 3
Query: 1830 PYLALCMDKKGKGKAKIREENLDAHLKYYGKTRRCIGEGSLFDPNLAEGSPKSKPIGSLMFFNAINDEEAKETAEGDPFNEAGLYDSVFIARFNEVDLSG 2129
P + L D+ +REE + HL+Y ++ + I G L + PKS G+LM FNA + +A E E DP AG+Y+++ + R+N++D++G
Sbjct: 24 PTMLLAFDRPEAMSDGLREEVQNEHLEYLIRSEKIIACGPLHVATQEKSDPKSVAAGTLMIFNAKDRNDAIEFVENDPMAVAGVYETMTVHRYNQLDVTG 123
BLAST of mRNA_P-fluviatile_contig11.1266.1 vs. uniprot
Match: A0A7S0EWI6_9EUKA (Hypothetical protein n=2 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EWI6_9EUKA) HSP 1 Score: 65.5 bits (158), Expect = 2.330e-7 Identity = 45/156 (28.85%), Postives = 75/156 (48.08%), Query Frame = 3
Query: 1668 VIGNMFCIRAYTKEGVLRLLEEDPYRKAGLFGTVSLYRYPYDMGGEFNWHLSTFPYLALCMDKKGKGKAKIREENLDAHLKYYGKTRRCIGEGSLFDPNLAEGSPKSKPIGSLMFFNAINDEEAKETAEGDPFNEAGLYDSVFIARFNEVDLSGFG 2135
V+GN+ ++ + V + DP+ G + +++ +R+ E N Y C+DK +++RE DAHL + + R G+L P L E +G+L+F N EE + A DP+N+AGL++SV +A + LS G
Sbjct: 196 VLGNLNVVKGSSLADVAAWGQGDPHDVVGAYASLTTHRWLRSPDPELNLPAPGPCYGVYCLDKPAS--SELREATRDAHLAWLAEGGRVHLGGALQSP-LGEAVGN---VGTLLFVNGDELEEVRRWATEDPYNQAGLFESVLVAPVTQYALSAAG 345
BLAST of mRNA_P-fluviatile_contig11.1266.1 vs. uniprot
Match: A0A7S3EF78_9RHOD (Hypothetical protein n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EF78_9RHOD) HSP 1 Score: 57.4 bits (137), Expect = 3.660e-5 Identity = 51/200 (25.50%), Postives = 90/200 (45.00%), Query Frame = 3
Query: 1530 TWGVRKQAHWEHLKWARIAKRTFDDDKDREAGILWDRSVLSPSKYRVIGNMFCIRAYTKEGVLRLLEEDPYRKAGLFGTVSLYRYPYDMGGEFNWHLSTFPYLALCMDKKGKGKAKIREENLDAHLKYYGKTRRCIGEGSLFDPNLAEGSPKSKPIGSLMFFNAINDEEAKETAEGDPFNEAGLYDSVFIARFNEVDLSG 2129
T +R Q EHL W +KR AG ++D++ + IG++ RA + + +DPY G+F S + E L+ Y+ +C D+ G +R E HL+++ + R +G + A+GS +GS++ ++EE + ++ DP+N AG+++SV I + V G
Sbjct: 59 TQDLRAQTRPEHLNWIVASKRALF------AGPMFDKAAVP------IGSLVIARAKDMKDIEEWNAQDPYASVGMFERESFREWKMVYRPEAP--LTDPIYVIICSDRDGA--KDLRAEVRPKHLEWWKSSGR---KGFIGPFPAADGSGA---VGSMIITEGKSEEEVTDWSKSDPYNVAGVFESVEIYPMSTVLFDG 236
BLAST of mRNA_P-fluviatile_contig11.1266.1 vs. uniprot
Match: A0A4V1EI45_9BURK (YciI family protein n=1 Tax=Burkholderia sp. DHOD12 TaxID=2571746 RepID=A0A4V1EI45_9BURK) HSP 1 Score: 52.8 bits (125), Expect = 9.600e-5 Identity = 34/100 (34.00%), Postives = 48/100 (48.00%), Query Frame = 3
Query: 1833 YLALCMDKKGKGKAKIREENLDAHLKYYGKTRRCIGEGSLFDPNLAEGSP------KSKPIGSLMFFNAINDEEAKETAEGDPFNEAGLYDSVFIARFNE 2114
Y+ LC DK G+ ++RE H Y + S+ P L +G P I S M A N E+ K EGDPF +AGLY+ V+I R+++
Sbjct: 3 YIRLCFDKAGQ--LELRESTRAEHRAY---VMPILAPTSV--PRLVQGGPLCVSDADDTNIASFMILEADNIEQVKRFHEGDPFTKAGLYEQVYIHRWDK 95 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1266.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig11.1266.1 >prot_P-fluviatile_contig11.1266.1 ID=prot_P-fluviatile_contig11.1266.1|Name=mRNA_P-fluviatile_contig11.1266.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=662bp MENMTAAQSDRTGVCCATPASRYFVTQSVGWAEYSEHQLAIERHFLCAVLback to top mRNA from alignment at P-fluviatile_contig11:3120476..3132298+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig11.1266.1 ID=mRNA_P-fluviatile_contig11.1266.1|Name=mRNA_P-fluviatile_contig11.1266.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=11823bp|location=Sequence derived from alignment at P-fluviatile_contig11:3120476..3132298+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig11:3120476..3132298+ >mRNA_P-fluviatile_contig11.1266.1 ID=mRNA_P-fluviatile_contig11.1266.1|Name=mRNA_P-fluviatile_contig11.1266.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3972bp|location=Sequence derived from alignment at P-fluviatile_contig11:3120476..3132298+ (Porterinema fluviatile SAG_2381)back to top |