prot_P-fluviatile_contig11.1266.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig11.1266.1
Unique Nameprot_P-fluviatile_contig11.1266.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length662
Homology
BLAST of mRNA_P-fluviatile_contig11.1266.1 vs. uniprot
Match: D8LMZ2_ECTSI (COG2350: Uncharacterized protein conserved in bacteria n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMZ2_ECTSI)

HSP 1 Score: 726 bits (1873), Expect = 1.110e-256
Identity = 354/475 (74.53%), Postives = 400/475 (84.21%), Query Frame = 0
Query:  189 GVACRLRTAGQDAGFHA-GGVGGDGCWRSERATRRWRSCLEAIKR-LGAEDGDETLKSKRVPAPKPEDEIRDDDFSDEAMRRLMFDIDPDAEAKGPMYFGDAGMYGEEVNHVKYPEEVRFPQCYLAFCLDRDEAEDEPKNFVTWGVRKQAHWEHLKWARIAKRTFDDDKDREAGILWDRSVLSPSKYRVIGNMFCIRAYTKEGVLRLLEEDPYRKAGLFGTVSLYRYPYDMGGEFNWHLSTFPYLALCMDKKGKGKAKIREENLDAHLKYYGKTRRCIGEGSLFDPNLAEGSPKSKPIGSLMFFNAINDEEAKETAEGDPFNEAGLYDSVFIARFNEVDLSGFGLGKANRIDPMRDIMAKEGLDRECEYPVNTGKYDVFANMKWLQTEVAKKQEQQYMEYRHKLYQQRDRRIERDEINQGVTFRPGVYVYMGKRSENEWYDYWPTKIGPDSSGVDEELFSLEASYPPVDPFEDDM 661
            G A    T G D GF A  G  G G WRS  ATRR   CL+A    LG   GD+ L+ K V A  PE++ R DD SDEAMRRLMFD+DPD++ KGPMYFGDAGMY +EVNHVKYPEEVRFPQ YLAFC+DR+E EDE KN+VTWGVR +AHWEH+KWARIAKRTF+DD DREAGILW+RSVLSPSK RVIGNMFCIR+YTKEG LRLLEEDPYRK+GLFGTVSLYRYPY+MGG FNWHLS FPYLALCMDKKG   AK+RE+N DAHL+YY +TRRCIGEG +   +LAE SP++KP+GSLMFFNAINDEEA+ETAEGDPFN+AGLYDSVF+ARFNE+DLSG GL +ANRIDPMRD+MAKEGLDRECEYPV  GKYD+F NMKWL+TEV KKQEQQYME+R KLYQQRDRRIER+EIN+G  FRPGVYVYMGKR+E EWYDYWPTK GPD+    EE ++++A YPPVD FEDD+
Sbjct:   61 GAAWPCTTDGGDGGFRAVEGGRGVGGWRSHGATRRRSGCLQAKNTPLGDGKGDDLLRLKNVAAAVPEED-RVDDHSDEAMRRLMFDMDPDSKDKGPMYFGDAGMYTDEVNHVKYPEEVRFPQSYLAFCVDREETEDEDKNYVTWGVRAKAHWEHVKWARIAKRTFEDDPDREAGILWNRSVLSPSKCRVIGNMFCIRSYTKEGALRLLEEDPYRKSGLFGTVSLYRYPYNMGGGFNWHLSNFPYLALCMDKKGS--AKLREKNNDAHLEYYERTRRCIGEGPVLSSDLAEDSPRNKPVGSLMFFNAINDEEARETAEGDPFNQAGLYDSVFVARFNEIDLSGIGLVRANRIDPMRDMMAKEGLDRECEYPVKFGKYDLFENMKWLKTEVEKKQEQQYMEHRLKLYQQRDRRIEREEINEGALFRPGVYVYMGKRTETEWYDYWPTKAGPDADAAGEEFYTMDACYPPVDHFEDDL 532          
BLAST of mRNA_P-fluviatile_contig11.1266.1 vs. uniprot
Match: A0A6H5JNB6_9PHAE (YCII domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNB6_9PHAE)

HSP 1 Score: 648 bits (1671), Expect = 1.800e-226
Identity = 321/490 (65.51%), Postives = 363/490 (74.08%), Query Frame = 0
Query:  260 DFSDEAMRRLMFDIDPDAEAKGPMYFGDAGMYGEEVNHVKYPEEVRFPQCYLAFCLDRDEAEDEPKNFVTWGVRKQAHWEHLKWARIAKRTFDDDKDREAGILWDRSVLSPSKYRVIGNMFCIRAYTK--------------------------EGVLRLLEEDPYRKAGLFGTVSLYRYPYDMGGEFNWHLSTFPYLALCMDKKGKGKAKIREENLDAHLKYYGKTRR-CIGEGSLFDPNLAEGSPKSKPIGSLMFFNAINDEEAKETAEGDPFNEAGLYDSVFIARFNEVDLSGFGLGKANRIDPMRDIMAKEGLDRECEYPVNTGKYDVFANMKWLQTEVAKKQEQQYMEYRHKLYQQR-------------------------------------------------------------DRRIERDEINQGVTFRPGVYVYMGKRSENEWYDYWPTKIGPDSSGVDEELFSLEASYPPVDPFEDDM 661
            D SDEAMRRLMFD+DPD++ KGPMYFGDAGMY +EVNHVKYPEEVRFPQ YLAFC+DR+E EDE KN+VTWGVR +AHWEH+KWARIAKRTF+DD DREAGILW+RSVLSPSK RVIGNMFCIR+YTK                          EG LRLLEEDPYRK+GLFGTVSLYRYPY+MGG FNWHLS FPYLALCMDKKGK  AK+RE+N DAHL+YY KTRR CIGEG +   +LAE SP++KP+GSLMFFNAINDEEA+ETAEGDPFN+AGLYDSVF+ARFNE+DLSG GL +ANRIDPMRD+MA+EGLDRECEYPV  GKYD+F NMKWL+TEV KKQEQQYME+R KLYQQR                                                             DRRIER+E+N+G  FRPGVYVYMGKR+E EWYDYWPTK GPD+    EE ++++A YPPVD FEDD+
Sbjct:   17 DHSDEAMRRLMFDMDPDSKDKGPMYFGDAGMYTDEVNHVKYPEEVRFPQSYLAFCVDREETEDEDKNYVTWGVRAKAHWEHVKWARIAKRTFEDDPDREAGILWNRSVLSPSKCRVIGNMFCIRSYTKASAIHLGYFYVLLRKIGSDEAVAGRKEGALRLLEEDPYRKSGLFGTVSLYRYPYNMGGGFNWHLSNFPYLALCMDKKGK--AKLREKNNDAHLEYYEKTRRRCIGEGPILSSDLAEDSPRNKPVGSLMFFNAINDEEARETAEGDPFNQAGLYDSVFVARFNEIDLSGIGLVRANRIDPMRDMMAQEGLDRECEYPVKFGKYDLFENMKWLKTEVEKKQEQQYMEHRLKLYQQRCVGGGAVVTSADDTPRWYDGMPSYGGRNVRAGTAVKAPVSAAVEGFSDVWLKAAHTVVVARDRRIEREEVNEGALFRPGVYVYMGKRTETEWYDYWPTKAGPDADAAGEEFYTMDACYPPVDHFEDDL 504          
BLAST of mRNA_P-fluviatile_contig11.1266.1 vs. uniprot
Match: A0A835ZAP4_9STRA (YCII domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAP4_9STRA)

HSP 1 Score: 124 bits (312), Expect = 1.290e-27
Identity = 79/254 (31.10%), Postives = 121/254 (47.64%), Query Frame = 0
Query:  310 YLAFCLDRDEAEDEPKNFVTWGVRKQAHWEHLKWARIAKRTFDDDKDREAGILWDRSVLSPSKYRVIGNMFCIRAYTKEGVLRLLEEDPYRKAGLFG------TVSLYRYPYDMGGEFNWHLSTFPYLALCMDKKGKGKAKIREENLDAHLKYYGKTRRCIGEGSLFDPNL-AEGSPKSKPIGSLMFFNAINDEEAKETAEGDPFNEAGLYDSVFIARFNEVDLSGFGLGKANRIDPMRDIMAKEGLDRECEYP 556
            YLA CLDRD+A+   +       R      H+ WAR + R     +   A +L+ R++L+P   R IGN+  I A ++     L   +PY  AGLF          LY +P +   E N+ L  +PY  + MD  G      R     AHL Y       +G   L        G     P+GS++F NA + E A+  A+ DP+  AG+++SV +    ++D+ G    +   +DP+RDI+ +EGL  + +YP
Sbjct:   88 YLAVCLDRDDADAFAR------ARCPNMIAHVAWARRSTRV----EGARARVLFSRALLAPDMQRTIGNLVGIAAASRADAEALWASEPYTAAGLFAGGGGGAAQLLYAWPRNDHTELNYDLRAYPYAIVAMDANGA--LPTRRATRPAHLAYLTSLGCVVGAAPLLPLGARGGGGAAGDPVGSVVFVNAESAEAARAIADADPYAAAGVFESVRVYALCDIDVEGTSQARPQTVDPVRDILEREGLTTKDDYP 329          
BLAST of mRNA_P-fluviatile_contig11.1266.1 vs. uniprot
Match: A0A7S2DFL6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DFL6_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 2.660e-14
Identity = 45/168 (26.79%), Postives = 89/168 (52.98%), Query Frame = 0
Query:  361 ILWDRSVLSPSKYRVIGNMFCIRAYTKEGVLRLLEEDPYRKAGLFGTVSLYRYPYDMGGEFNWHLSTFPYLALCMDKKGKGKAKIREENLDAHLKYYGKTRRCIGEGSLFDPNLAEGSPKSKPIGSLMFFNAINDEEAKETAEGDPFNEAGLYDSVFIARFNEVDLSG 528
            ILW+RS+   +   + G +    A ++E +  L+ +DPY   G+F  + ++R+  +   E  +   + P++ LC+DK G      R      HL++   ++  +  G +F      G+ +  PIGS +   A + E A   ++ DP+ +AG+++SV I+ ++E+D++G
Sbjct:   49 ILWERSLYEDNDMYIHGCVTGYAAASREELDTLMSKDPYITEGVFSDIQVFRWKQNNDPELRFEPKSAPHVFLCLDKPGM--LATRTATRPDHLEWLQTSKLVMAAGPIFSAESGAGALEDGPIGSFVCAAADDVESAHAWSKEDPYAQAGIFESVRISHYSEMDVTG 214          
BLAST of mRNA_P-fluviatile_contig11.1266.1 vs. uniprot
Match: A0A7S2P7F9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P7F9_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.140e-8
Identity = 33/100 (33.00%), Postives = 55/100 (55.00%), Query Frame = 0
Query:  429 PYLALCMDKKGKGKAKIREENLDAHLKYYGKTRRCIGEGSLFDPNLAEGSPKSKPIGSLMFFNAINDEEAKETAEGDPFNEAGLYDSVFIARFNEVDLSG 528
            P + L  D+       +REE  + HL+Y  ++ + I  G L      +  PKS   G+LM FNA +  +A E  E DP   AG+Y+++ + R+N++D++G
Sbjct:   24 PTMLLAFDRPEAMSDGLREEVQNEHLEYLIRSEKIIACGPLHVATQEKSDPKSVAAGTLMIFNAKDRNDAIEFVENDPMAVAGVYETMTVHRYNQLDVTG 123          
BLAST of mRNA_P-fluviatile_contig11.1266.1 vs. uniprot
Match: A0A7S0EWI6_9EUKA (Hypothetical protein n=2 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EWI6_9EUKA)

HSP 1 Score: 65.5 bits (158), Expect = 1.070e-7
Identity = 45/156 (28.85%), Postives = 75/156 (48.08%), Query Frame = 0
Query:  375 VIGNMFCIRAYTKEGVLRLLEEDPYRKAGLFGTVSLYRYPYDMGGEFNWHLSTFPYLALCMDKKGKGKAKIREENLDAHLKYYGKTRRCIGEGSLFDPNLAEGSPKSKPIGSLMFFNAINDEEAKETAEGDPFNEAGLYDSVFIARFNEVDLSGFG 530
            V+GN+  ++  +   V    + DP+   G + +++ +R+      E N       Y   C+DK     +++RE   DAHL +  +  R    G+L  P L E       +G+L+F N    EE +  A  DP+N+AGL++SV +A   +  LS  G
Sbjct:  196 VLGNLNVVKGSSLADVAAWGQGDPHDVVGAYASLTTHRWLRSPDPELNLPAPGPCYGVYCLDKPAS--SELREATRDAHLAWLAEGGRVHLGGALQSP-LGEAVGN---VGTLLFVNGDELEEVRRWATEDPYNQAGLFESVLVAPVTQYALSAAG 345          
BLAST of mRNA_P-fluviatile_contig11.1266.1 vs. uniprot
Match: A0A7S3EF78_9RHOD (Hypothetical protein n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EF78_9RHOD)

HSP 1 Score: 57.4 bits (137), Expect = 1.810e-5
Identity = 51/200 (25.50%), Postives = 90/200 (45.00%), Query Frame = 0
Query:  329 TWGVRKQAHWEHLKWARIAKRTFDDDKDREAGILWDRSVLSPSKYRVIGNMFCIRAYTKEGVLRLLEEDPYRKAGLFGTVSLYRYPYDMGGEFNWHLSTFPYLALCMDKKGKGKAKIREENLDAHLKYYGKTRRCIGEGSLFDPNLAEGSPKSKPIGSLMFFNAINDEEAKETAEGDPFNEAGLYDSVFIARFNEVDLSG 528
            T  +R Q   EHL W   +KR         AG ++D++ +       IG++   RA   + +     +DPY   G+F   S   +      E    L+   Y+ +C D+ G     +R E    HL+++  + R   +G +     A+GS     +GS++     ++EE  + ++ DP+N AG+++SV I   + V   G
Sbjct:   59 TQDLRAQTRPEHLNWIVASKRALF------AGPMFDKAAVP------IGSLVIARAKDMKDIEEWNAQDPYASVGMFERESFREWKMVYRPEAP--LTDPIYVIICSDRDGA--KDLRAEVRPKHLEWWKSSGR---KGFIGPFPAADGSGA---VGSMIITEGKSEEEVTDWSKSDPYNVAGVFESVEIYPMSTVLFDG 236          
BLAST of mRNA_P-fluviatile_contig11.1266.1 vs. uniprot
Match: A0A4V1EI45_9BURK (YciI family protein n=1 Tax=Burkholderia sp. DHOD12 TaxID=2571746 RepID=A0A4V1EI45_9BURK)

HSP 1 Score: 52.8 bits (125), Expect = 5.190e-5
Identity = 34/100 (34.00%), Postives = 48/100 (48.00%), Query Frame = 0
Query:  430 YLALCMDKKGKGKAKIREENLDAHLKYYGKTRRCIGEGSLFDPNLAEGSP------KSKPIGSLMFFNAINDEEAKETAEGDPFNEAGLYDSVFIARFNE 523
            Y+ LC DK G+   ++RE     H  Y       +   S+  P L +G P          I S M   A N E+ K   EGDPF +AGLY+ V+I R+++
Sbjct:    3 YIRLCFDKAGQ--LELRESTRAEHRAY---VMPILAPTSV--PRLVQGGPLCVSDADDTNIASFMILEADNIEQVKRFHEGDPFTKAGLYEQVYIHRWDK 95          
BLAST of mRNA_P-fluviatile_contig11.1266.1 vs. uniprot
Match: UPI001F3F6F1B (YciI family protein n=1 Tax=Burkholderia cepacia TaxID=292 RepID=UPI001F3F6F1B)

HSP 1 Score: 52.4 bits (124), Expect = 7.080e-5
Identity = 30/99 (30.30%), Postives = 50/99 (50.51%), Query Frame = 0
Query:  430 YLALCMDKKGKGKAKIREENLDAHLKYYGKTRRCIGEGSLFDPNLAEGSP------KSKPIGSLMFFNAINDEEAKETAEGDPFNEAGLYDSVFIARFN 522
            Y+ LC D+ G     +RE++  AH  Y+   +  +G+G++  P L +  P          +GS M   A +  + +   +GDPF   GLYD VF+ R++
Sbjct:    3 YIRLCFDRPGT--TDLREQHRAAHRAYF---QPNLGDGAM--PRLVQAGPLCIDDTNDTNLGSFMILEANSLADVQRFHDGDPFTRVGLYDKVFLHRWD 94          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1266.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LMZ2_ECTSI1.110e-25674.53COG2350: Uncharacterized protein conserved in bact... [more]
A0A6H5JNB6_9PHAE1.800e-22665.51YCII domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835ZAP4_9STRA1.290e-2731.10YCII domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S2DFL6_9STRA2.660e-1426.79Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2P7F9_9STRA1.140e-833.00Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S0EWI6_9EUKA1.070e-728.85Hypothetical protein n=2 Tax=Phaeocystis antarctic... [more]
A0A7S3EF78_9RHOD1.810e-525.50Hypothetical protein n=4 Tax=Rhodosorus marinus Ta... [more]
A0A4V1EI45_9BURK5.190e-534.00YciI family protein n=1 Tax=Burkholderia sp. DHOD1... [more]
UPI001F3F6F1B7.080e-530.30YciI family protein n=1 Tax=Burkholderia cepacia T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.1060coord: 309..418
e-value: 3.6E-6
score: 28.9
coord: 428..527
e-value: 5.0E-16
score: 60.5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..130
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 154..661
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 131..153
NoneNo IPR availableTMHMMTMhelixcoord: 131..153
IPR011008Dimeric alpha-beta barrelSUPERFAMILY54909Dimeric alpha+beta barrelcoord: 430..522

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig11contigP-fluviatile_contig11:3121021..3131264 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig11.1266.1mRNA_P-fluviatile_contig11.1266.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig11 3120476..3132298 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig11.1266.1 ID=prot_P-fluviatile_contig11.1266.1|Name=mRNA_P-fluviatile_contig11.1266.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=662bp
MENMTAAQSDRTGVCCATPASRYFVTQSVGWAEYSEHQLAIERHFLCAVL
WFAVAVAVVPRSGVPSPDTRPARSLTPRISIPMLLKSSDILEPMPKLAEV
ASHQPVGPSRHSSQRRTAGAKSRRRGGTVRWGGRSGIVATANAALLSLLL
FGFCSVGGRSFVPPYPPAGGAFIAPAPSGSRSGAAARTGVACRLRTAGQD
AGFHAGGVGGDGCWRSERATRRWRSCLEAIKRLGAEDGDETLKSKRVPAP
KPEDEIRDDDFSDEAMRRLMFDIDPDAEAKGPMYFGDAGMYGEEVNHVKY
PEEVRFPQCYLAFCLDRDEAEDEPKNFVTWGVRKQAHWEHLKWARIAKRT
FDDDKDREAGILWDRSVLSPSKYRVIGNMFCIRAYTKEGVLRLLEEDPYR
KAGLFGTVSLYRYPYDMGGEFNWHLSTFPYLALCMDKKGKGKAKIREENL
DAHLKYYGKTRRCIGEGSLFDPNLAEGSPKSKPIGSLMFFNAINDEEAKE
TAEGDPFNEAGLYDSVFIARFNEVDLSGFGLGKANRIDPMRDIMAKEGLD
RECEYPVNTGKYDVFANMKWLQTEVAKKQEQQYMEYRHKLYQQRDRRIER
DEINQGVTFRPGVYVYMGKRSENEWYDYWPTKIGPDSSGVDEELFSLEAS
YPPVDPFEDDM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011008Dimeric_a/b-barrel