prot_P-fluviatile_contig6.12699.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig6.12699.1
Unique Nameprot_P-fluviatile_contig6.12699.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length188
Homology
BLAST of mRNA_P-fluviatile_contig6.12699.1 vs. uniprot
Match: D7G2F8_ECTSI (DNA polymerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F8_ECTSI)

HSP 1 Score: 241 bits (616), Expect = 1.620e-75
Identity = 123/186 (66.13%), Postives = 145/186 (77.96%), Query Frame = 0
Query:    1 MLIRPPEGQECGTSQDLEMLMELVAKLKEAGFITDELSKPLGPYTPGKPQTWMGMCKLEGEGRLHRRLDIKLYPTSMYAFAVLYFTGSGHFNMSMRAFAKLKGFKLSDEGLCRVNTVNREEVHKFESISCLREQDVFDALGMNWREPKDRDEVEVQAHQRTGSNGVPEVVGRVVPVPSEEQRQQHQ 186
            +LIRPPEGQE     D  M  +L+ +L E GFITD+L+   GP+ PGK Q++MG+CKL G GRLHRR+DIK YPTS++AFAVLYFTGS HFN SMR+FAK+KG KLSD+GLCRVNTVN EEVH+F S SCLRE+DVF ALG+ WREPKDRD V+VQA    G  G  E+ GRVVPV + EQ QQHQ
Sbjct:  227 VLIRPPEGQE-----DSPMFDDLIKRLVETGFITDKLTLAGGPHRPGKSQSFMGICKLPGTGRLHRRVDIKFYPTSLFAFAVLYFTGSSHFNRSMRSFAKIKGLKLSDKGLCRVNTVNGEEVHRFPSYSCLREEDVFTALGLEWREPKDRDGVQVQAFCSKGEGGATELSGRVVPV-TLEQEQQHQ 406          
BLAST of mRNA_P-fluviatile_contig6.12699.1 vs. uniprot
Match: A0A6H5JHQ3_9PHAE (DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ3_9PHAE)

HSP 1 Score: 238 bits (608), Expect = 2.020e-70
Identity = 121/186 (65.05%), Postives = 145/186 (77.96%), Query Frame = 0
Query:    1 MLIRPPEGQECGTSQDLEMLMELVAKLKEAGFITDELSKPLGPYTPGKPQTWMGMCKLEGEGRLHRRLDIKLYPTSMYAFAVLYFTGSGHFNMSMRAFAKLKGFKLSDEGLCRVNTVNREEVHKFESISCLREQDVFDALGMNWREPKDRDEVEVQAHQRTGSNGVPEVVGRVVPVPSEEQRQQHQ 186
            +LIRPPEGQE     D  +  +L+ +L E GFITD+L+    P+ PGK Q++MG+CKL G+GRLHRR+DIK YPTS++AFAVLYFTGS HFN SMR+FAK+KG KLSD+GLCRVNTVN EEVH+F S SCLRE+DVF ALG+ WREPKDRD V+VQA    G  G  E+ GRVVPV + EQ QQHQ
Sbjct:  699 VLIRPPEGQE-----DSPVFDDLIKRLVETGFITDKLTLAGSPHKPGKSQSFMGICKLPGKGRLHRRVDIKFYPTSLFAFAVLYFTGSSHFNRSMRSFAKIKGLKLSDKGLCRVNTVNGEEVHRFPSYSCLREEDVFTALGLEWREPKDRDGVQVQAFCSKGEGGATELSGRVVPV-TLEQEQQHQ 878          
BLAST of mRNA_P-fluviatile_contig6.12699.1 vs. uniprot
Match: D7G2F7_ECTSI (DNA polymerase lambda n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F7_ECTSI)

HSP 1 Score: 204 bits (519), Expect = 2.720e-58
Identity = 102/160 (63.75%), Postives = 123/160 (76.88%), Query Frame = 0
Query:    1 MLIRPPEGQECGTSQDLEMLMELVAKLKEAGFITDELSKPLGPYTPGKPQTWMGMCKLEGEGRLHRRLDIKLYPTSMYAFAVLYFTGSGHFNMSMRAFAKLKGFKLSDEGLCRVNTVNREEVHKFESISCLREQDVFDALGMNWREPKDRDEVEVQAHQR 160
            +LIRPPEGQE     D  M +EL+ +L E GFITD L+ P GPYTPGKPQT+MG+CKL GEG++HRRLD+KLYPTSM+AFAVLYFTGSG FNM+MR FAK KG KL+D+GL +V+  + EEV      SCLRE+DVF ALGM+W EPKDR  V   +H +
Sbjct:  486 VLIRPPEGQE-----DSPMFLELIKELTETGFITDRLAMPEGPYTPGKPQTFMGVCKLPGEGQIHRRLDVKLYPTSMFAFAVLYFTGSGDFNMNMRCFAKSKGLKLNDKGLFKVDPFSGEEVPN-SGYSCLREEDVFSALGMDWIEPKDRKGVGPASHNQ 639          
BLAST of mRNA_P-fluviatile_contig6.12699.1 vs. uniprot
Match: A0A6H5JQ91_9PHAE (DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ91_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 2.660e-55
Identity = 100/160 (62.50%), Postives = 118/160 (73.75%), Query Frame = 0
Query:    1 MLIRPPEGQECGTSQDLEMLMELVAKLKEAGFITDELSKPLGPYTPGKPQTWMGMCKLEGEGRLHRRLDIKLYPTSMYAFAVLYFTGSGHFNMSMRAFAKLKGFKLSDEGLCRVNTVNREEVHKFESISCLREQDVFDALGMNWREPKDRDEVEVQAHQR 160
            +LIRPPEGQE     D  M +ELV +L E   ITD L+ P GPYTPGKPQT+MG+CKL GEGRLHRRLDIKLYP SM+AFAVLYF GSG FNM+MR F K KG KL+D+GL +V+  + EEV      SC RE+DVF ALGM+W EPKDR  V + +H +
Sbjct:  458 VLIRPPEGQE-----DSSMFLELVKELTETRLITDRLAVPEGPYTPGKPQTFMGVCKLPGEGRLHRRLDIKLYPASMFAFAVLYFAGSGDFNMNMRCFGKSKGLKLNDKGLFKVDPFSGEEVPN-SGYSCFREEDVFTALGMDWIEPKDRKGVGLASHNQ 611          
BLAST of mRNA_P-fluviatile_contig6.12699.1 vs. uniprot
Match: A0A7S0CV83_9EUKA (DNA polymerase (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CV83_9EUKA)

HSP 1 Score: 124 bits (310), Expect = 3.060e-30
Identity = 64/133 (48.12%), Postives = 89/133 (66.92%), Query Frame = 0
Query:   23 LVAKLKEAGFITDELSKPLGP-YTPGKPQTWMGMCKL----EGEGRLHRRLDIKLYPTSMYAFAVLYFTGSGHFNMSMRAFAKLKGFKLSDEGLCRVNTVNREEVHKFESISCLREQDVFDALGMNWREPKDR 150
            LV +L+  GF+TDELS   G      + QT  G+C+L    +G+ R +RR+D+K+YP   +AFA+LYFTGS HFN SMR +A  KG  LSD GLC+   VNRE V + +S+    E+D+FDALG+++ EP+ R
Sbjct:  287 LVTRLRRTGFLTDELSHGYGHGKRKHESQTCFGVCRLPPTTDGKRRRYRRIDLKVYPRRSFAFAILYFTGSDHFNRSMRWYAHKKGLTLSDHGLCKATRVNRERVWEGQSVFAETEKDIFDALGLDYVEPQFR 419          
BLAST of mRNA_P-fluviatile_contig6.12699.1 vs. uniprot
Match: A0A5D6XPH7_9STRA (DNA polymerase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPH7_9STRA)

HSP 1 Score: 124 bits (312), Expect = 9.100e-30
Identity = 73/172 (42.44%), Postives = 106/172 (61.63%), Query Frame = 0
Query:    1 MLIRPPEGQECGTSQDLEMLMELVAKLKEAGFITDELSKPLGPYTPGKPQTWMGMCKLEGEGRLHRRLDIKLYPTSMYAFAVLYFTGSGHFNMSMRAFAKLKGFKLSDEGLCRVNTVNREEVHKFESISCLREQDVFDALGMNWREPKDR--------DEVEVQA-HQRTGS 163
            +LI  P+ +EC      ++L EL+ +L E GF+TD+L+  +  +  G   T+MG+C++  +   HRRLDIK+YP   + FA+LYFTGS HFN S+R FA  KG+ LSD  L  V  VN + V +  S+ C  E DVF ALGM++++P++R        DE E  A H++ GS
Sbjct:  477 VLITDPDNEEC------DVLPELLKRLHETGFLTDDLTH-VSEHHMGGCDTYMGVCRVSKD-LPHRRLDIKVYPRRCFGFALLYFTGSDHFNRSVRLFANKKGWSLSDRALKPVTCVNDKRVARGASVVCTSEVDVFIALGMDYKDPRERNCFDVKFLDEDEANAKHRKKGS 640          
BLAST of mRNA_P-fluviatile_contig6.12699.1 vs. uniprot
Match: A0A7S2TRD1_9EUKA (DNA polymerase n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TRD1_9EUKA)

HSP 1 Score: 115 bits (287), Expect = 8.930e-29
Identity = 63/135 (46.67%), Postives = 85/135 (62.96%), Query Frame = 0
Query:   20 LMELVAKLKEAGFITDELSKPLG-PYTPGKPQTWMGMCKL---EGEGRLHRRLDIKLYPTSMYAFAVLYFTGSGHFNMSMRAFAKLKGFKLSDEGLCRVNTVNREEVHKFESISCLREQDVFDALGMNWREPKDR 150
            L  LV +L+ AGF+TDELS          + QT  G+C+L    G+  L+RRLD+K+YP   +AFA+LYFTGS HFN SMR +A  KG  LSD GL +   VNRE+V +  S+ C  E+++F  LG+ + EP  R
Sbjct:   44 LPNLVRRLRIAGFLTDELSHGFHHSRRKHESQTCFGVCRLPNKNGKKSLYRRLDLKVYPREQFAFAILYFTGSDHFNRSMRWYAHKKGLTLSDHGLKKTTRVNREKVWEGHSVFCETEEEIFYVLGLEYVEPTRR 178          
BLAST of mRNA_P-fluviatile_contig6.12699.1 vs. uniprot
Match: A0A421FWQ7_9STRA (DNA polymerase n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FWQ7_9STRA)

HSP 1 Score: 121 bits (303), Expect = 1.440e-28
Identity = 66/150 (44.00%), Postives = 94/150 (62.67%), Query Frame = 0
Query:    1 MLIRPPEGQECGTSQDLEMLMELVAKLKEAGFITDELSKPLGPYTPGKPQTWMGMCKLEGEGRLHRRLDIKLYPTSMYAFAVLYFTGSGHFNMSMRAFAKLKGFKLSDEGLCRVNTVNREEVHKFESISCLREQDVFDALGMNWREPKDR 150
            +LI  P+ ++CG      +L EL+ +L   GF+TD L+     +T G   T+MG+C++  EG  +RR+DIK+YP   + FA L+FTGS HFN SMR FA   G+ LSD  L RV  +N  +V + ES+ C  E DVF ALG+ ++EP +R
Sbjct:  458 ILITDPDAEQCG------ILPELLERLHAIGFLTDNLTHVSKQHTGGC-DTYMGVCRVS-EGLPYRRIDIKVYPRRFFGFATLHFTGSDHFNRSMRLFANKNGWNLSDRALTRVMRINGLKVKQGESVICESEVDVFIALGLEYKEPTER 599          
BLAST of mRNA_P-fluviatile_contig6.12699.1 vs. uniprot
Match: A0A7S4CPW7_9EUGL (DNA polymerase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CPW7_9EUGL)

HSP 1 Score: 112 bits (280), Expect = 2.110e-28
Identity = 57/141 (40.43%), Postives = 80/141 (56.74%), Query Frame = 0
Query:   30 AGFITDELSKPLGPYTPGKPQTWMGMCKLEG--------------------EGRLHRRLDIKLYPTSMYAFAVLYFTGSGHFNMSMRAFAKLKGFKLSDEGLCRVNTVNREEVHKFESISCLREQDVFDALGMNWREPKDR 150
            AGF+TD LS  +       P ++MG+C++                         LHRR+DIK+YP  M+ FAVLYFTGS +FN SMR +   KG  LSD+GL  V  V ++ VH+   I C  E+D+FDA+G+ ++EP +R
Sbjct:    1 AGFLTDHLSMSVKSLASDDPDSYMGVCQIPACNDSLTCPCSHSCDVGLGSDRAHLHRRIDIKVYPKHMFPFAVLYFTGSDYFNRSMRLYCHQKGLSLSDKGLVPVVRVKKDVVHEGPPIPCNSEKDIFDAIGLEYKEPSER 141          
BLAST of mRNA_P-fluviatile_contig6.12699.1 vs. uniprot
Match: A0A7S2HHH8_9STRA (DNA polymerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HHH8_9STRA)

HSP 1 Score: 115 bits (288), Expect = 4.740e-28
Identity = 68/172 (39.53%), Postives = 101/172 (58.72%), Query Frame = 0
Query:    1 MLIRPPEGQECGTSQDLE--------MLMELVAKLKEAGFITDELSKPLGPY-TPGK------------PQTWMGMCKLEGEGRLHRRLDIKLYPTSMYAFAVLYFTGSGHFNMSMRAFAKLKGFKLSDEGLCRVNTVNREEVHKFESISCLREQDVFDALGMNWREPKDRD 151
            +L+ PP      T QD E        +L  L+ +L  + F+TD+L+ P  P+ + G+            PQT+MG+CKL G   LHRRLDIK+YP  M AFA +YFTGS +FN SMR  A+ +G+ LSD+GL        ++     S++C  E+++F+ +GM+W+EP +RD
Sbjct:  126 VLLGPPPS---ATGQDSEADEAAMQSLLPNLLQQLHTSNFLTDDLTLPYTPFKSSGRYPSDGNSAEGSLPQTYMGVCKL-GADHLHRRLDIKVYPREMIAFAQMYFTGSDYFNRSMRCLARRQGWSLSDKGL--------KKRFGAGSVTCHSEKEIFEVMGMDWKEPHERD 285          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12699.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2F8_ECTSI1.620e-7566.13DNA polymerase n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A6H5JHQ3_9PHAE2.020e-7065.05DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP ... [more]
D7G2F7_ECTSI2.720e-5863.75DNA polymerase lambda n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5JQ91_9PHAE2.660e-5562.50DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP ... [more]
A0A7S0CV83_9EUKA3.060e-3048.12DNA polymerase (Fragment) n=1 Tax=Amorphochlora am... [more]
A0A5D6XPH7_9STRA9.100e-3042.44DNA polymerase n=1 Tax=Pythium brassicum TaxID=148... [more]
A0A7S2TRD1_9EUKA8.930e-2946.67DNA polymerase n=1 Tax=Lotharella oceanica TaxID=6... [more]
A0A421FWQ7_9STRA1.440e-2844.00DNA polymerase n=2 Tax=Phytophthora kernoviae TaxI... [more]
A0A7S4CPW7_9EUGL2.110e-2840.43DNA polymerase n=1 Tax=Eutreptiella gymnastica Tax... [more]
A0A7S2HHH8_9STRA4.740e-2839.53DNA polymerase n=1 Tax=Dictyocha speculum TaxID=35... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002008DNA polymerase family X, beta-likePRINTSPR00870DNAPOLXBETAcoord: 66..74
score: 60.0
coord: 81..88
score: 75.0
coord: 133..150
score: 54.44
IPR022312DNA polymerase family XPRINTSPR00869DNAPOLXcoord: 132..150
score: 40.08
coord: 83..96
score: 45.05
coord: 67..76
score: 36.92
IPR037160DNA polymerase, thumb domain superfamilyGENE3D3.30.210.10coord: 84..151
e-value: 5.4E-23
score: 82.8
IPR028207DNA polymerase beta, palm domainPFAMPF14792DNA_pol_B_palmcoord: 2..74
e-value: 5.3E-11
score: 42.7
IPR029398DNA polymerase beta, thumb domainPFAMPF14791DNA_pol_B_thumbcoord: 81..151
e-value: 6.1E-20
score: 71.2
NoneNo IPR availableGENE3D3.30.460.10coord: 1..83
e-value: 3.3E-17
score: 64.6
NoneNo IPR availablePANTHERPTHR11276:SF1DNA POLYMERASE BETAcoord: 3..150
NoneNo IPR availablePANTHERPTHR11276DNA POLYMERASE TYPE-X FAMILY MEMBERcoord: 3..150
NoneNo IPR availableSUPERFAMILY81301Nucleotidyltransferasecoord: 13..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig6contigP-fluviatile_contig6:3738718..3742038 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig6.12699.1mRNA_P-fluviatile_contig6.12699.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig6 3738667..3744235 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig6.12699.1 ID=prot_P-fluviatile_contig6.12699.1|Name=mRNA_P-fluviatile_contig6.12699.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=188bp
MLIRPPEGQECGTSQDLEMLMELVAKLKEAGFITDELSKPLGPYTPGKPQ
TWMGMCKLEGEGRLHRRLDIKLYPTSMYAFAVLYFTGSGHFNMSMRAFAK
LKGFKLSDEGLCRVNTVNREEVHKFESISCLREQDVFDALGMNWREPKDR
DEVEVQAHQRTGSNGVPEVVGRVVPVPSEEQRQQHQQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002008DNA_pol_X_beta-like
IPR022312DNA_pol_X
IPR037160DNA_Pol_thumb_sf
IPR028207DNA_pol_B_palm_palm
IPR029398PolB_thumb