mRNA_P-fluviatile_contig11.1232.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig11.1232.1 vs. uniprot
Match: D8LK96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK96_ECTSI) HSP 1 Score: 352 bits (904), Expect = 1.540e-116 Identity = 212/340 (62.35%), Postives = 226/340 (66.47%), Query Frame = 3
Query: 222 MRNDEHDG-----FTTGLKSEALNVAFNGFAGATAGAVSRLLTAPFDVAKIRFQLDHGATRRYDSSLWVAMRSIYGEEGLIALWRGNLPAMLLWSAYTGVQFGVYEHLRSADFFGSRRKRPHDSXXXXXXXXSGSTAGVEPFFAEDSSGASGREGDNSRAREVEGKWVRGVR-GEGGVE-----MDTKGERNLPPALANFAYGSIAAFIATVATYPLDITRTALAFQGVPKRYGSMSEFLSRTLRESGPRALFRGVTPTLAMITPQMGVSFAVWEALSRMPPPAIVTAVAPGSKPGGTTVAXXXXAAAWQLGVGAAAGVAGKLAVFPLDTVKKRVQTAVR 1208
M E DG T L S+AL VA NGFAGATAGAVSR+LTAP DVAKIRFQLDHGATRRYDS+LW AMRSIYGEEGL+ LWRGNLPAM LWSAYT VQF YE LR+ DF R R HDS SG SS R G R +V G W G R GE + D +G R LPPALANFAYG++AAF ATV TYPLDITRTALAFQGVPKRY SMSEFL RT RESG R LFRG TPTLAMITPQMGVSFAVWEAL PP + G+ P T +WQLG G AG+ GKL VFPLDTVKKRVQTAVR
Sbjct: 1 MNTREQDGEPCAALTAVLTSKALEVARNGFAGATAGAVSRVLTAPLDVAKIRFQLDHGATRRYDSTLWAAMRSIYGEEGLVTLWRGNLPAMFLWSAYTAVQFSAYEQLRATDFL---RSRQHDSSV------SGGGVRHRGSICPSSSPPHERRGAG-RVGKVGGGWRTGGREGESPCQARRRQQDGRG-RGLPPALANFAYGAMAAFTATVVTYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPPAFSGSGSGASPAATL--------SWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVR 321
BLAST of mRNA_P-fluviatile_contig11.1232.1 vs. uniprot
Match: A0A6H5KH83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH83_9PHAE) HSP 1 Score: 338 bits (867), Expect = 3.640e-110 Identity = 202/331 (61.03%), Postives = 224/331 (67.67%), Query Frame = 3
Query: 246 FTTGLKSEALNVAFNGFAGATAGAVSRLLTAPFDVAKIRFQLDHGATRRYDSSLWVAMRSIYGEEGLIALWRGNLPAMLLWSAYTGVQFGVYEHLRSADFFGSRRKRPHDSXXXXXXXXSGSTAGVEPFFAEDSSGASGREGDNSRAREVEGKWVRGVRGEGGVE-----MDTKGERNLPPALANFAYGSIAAFIATVATYPLDITRTALAFQGVPKRYGSMSEFLSRTLRESGPRALFRGVTPTLAMITPQMGVSFAVWEALSRMPPPAIVTAVAPGSKPGGTTVAXXXXAAAWQLGVGAAAGVAGKLAVFPLDTVKKRVQTAVRIEASN 1223
T L S+AL VA +GFAGATAGAVSR+LTAP DVAKIRFQLDHGATRRYDS+LW AMRSIYGEEGL+ LWRGNLPAM LW+AYT VQF YE LR+ DF SR+ H+S GS+ SS R G R EV G G GE + D +G R LPPALANF YG++AAF AT+ TYPLDITRTALAFQGVPKRY SMSEFL RT RESG R LFRG TPTLAMITPQMGVSFAVWEAL T AP + G + A +WQLG G AG+ GKL VFPLDTVKKRVQTAV +E ++
Sbjct: 32 LTAVLTSKALEVARSGFAGATAGAVSRVLTAPLDVAKIRFQLDHGATRRYDSTLWAAMRSIYGEEGLVTLWRGNLPAMFLWAAYTAVQFSAYEQLRATDFLLSRQ---HNSVSGGGVRYRGSSC-------PSSSSPHERRGAG-RVGEVGGWRTGGREGENQYQALRRQQDGRG-RGLPPALANFVYGAMAAFTATLVTYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGVRGLFRGATPTLAMITPQMGVSFAVWEAL---------TGGAPRAFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVMMERNS 341
BLAST of mRNA_P-fluviatile_contig11.1232.1 vs. uniprot
Match: A0A836C8L1_9STRA (Mitochondrial substrate/solute carrier n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8L1_9STRA) HSP 1 Score: 160 bits (406), Expect = 1.640e-42 Identity = 119/308 (38.64%), Postives = 149/308 (48.38%), Query Frame = 3
Query: 288 NGFAGATAGAVSRLLTAPFDVAKIRFQLDHG-ATRRYDSSLWVAMRSIYGEEGLIALWRGNLPAMLLWSAYTGVQFGVYEHLRSADFFGSRRKRPHDSXXXXXXXXSGSTAGVEPFFAEDSSGASGREGDNSRAREVEGKWVRGVRGEGGVEMDTKGERNLPPALANFAYGSIAAFIATVATYPLDITRTALAFQGVPKRYGSMSEFLSRTLRESGPRALFRGVTPTLAMITPQMGVSFAVWEALSRMPPPAIVTAVAPGSKPGGTTVAXXXXAAAWQLGV-GAAAGVAGKLAVFPLDTVKKRVQTAV 1205
N AG AGAVSR+ TAP DVAKIR QLD G A+ RY SL RS+Y EEGLI LWRGN AM LW AYT VQFG+Y +R A S S A +R R+ + F G+ AA +AT TYPLD+ RTA A QGVP+R+ ++ F + TL +G R + G++ L + PQMG++F +EA+ PP A+ A APG A W GV G +AG+ K V+PLDT+KKRVQ V
Sbjct: 18 NAVAGGVAGAVSRISTAPLDVAKIRCQLDGGKASPRY-GSLLKTFRSVYAEEGLIGLWRGNPAAMALWIAYTAVQFGLYPLVRDA--------------------LSASRASAY-----------------ARPRQTD----------------------------KFLAGAAAACVATTCTYPLDVMRTAFAGQGVPRRHPTLRAFAANTLHVAGVRGFYAGLSAALVQVAPQMGIAFMAYEAVKDHPPQAL--AAAPGL-------------ATWWPGVAGFSAGLLSKTVVYPLDTLKKRVQARV 244
BLAST of mRNA_P-fluviatile_contig11.1232.1 vs. uniprot
Match: A0A836C9B4_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9B4_9STRA) HSP 1 Score: 159 bits (401), Expect = 1.670e-41 Identity = 109/302 (36.09%), Postives = 149/302 (49.34%), Query Frame = 3
Query: 294 FAGATAGAVSRLLTAPFDVAKIRFQLDHG-ATRRYDSSLWVAMRSIYGEEGLIALWRGNLPAMLLWSAYTGVQFGVYEHLRSADFFGSRRKRPHDSXXXXXXXXSGSTAGVEPFFAEDSSGASGREGDNSRAREVEGKWVRGVRGEGGVEMDTKGERNLPPALANFAYGSIAAFIATVATYPLDITRTALAFQGVPKRYGSMSEFLSRTLRESGPRALFRGVTPTLAMITPQMGVSFAVWEALSRMPPPAIVTAVAPGSKPGGTTVAXXXXAAAWQLGVGAAAGVAGKLAVFPLDTVKKRVQ 1196
FAG +GAVSRL TAP DVAKIR QLD G + RYD L + RS+Y EEGL++LWRG+ AM+LW +Y+GVQFGVY P F R + +W R E + +R F G+ A +AT ATYP D+ RTA A QGVP+++ ++ F++ TLR G R L+ G+TP + + PQ+G++F +EA+ P A+ A G A W G AG+ K+AV+P+DT+KKR+Q
Sbjct: 33 FAGCVSGAVSRLATAPLDVAKIRCQLDGGRGSARYDGLL-MTFRSVYAEEGLVSLWRGSPAAMMLWVSYSGVQFGVY-----------------------------------PVF-----------------RRLLMRWRRWAHQEEASLFLQQRDR--------FLAGAAAGCVATTATYPFDVMRTAFAGQGVPRQHETLHAFVAGTLRTKGARGLYAGLTPAIMQMAPQIGIAFVCYEAMRDNVPAALRALPAVG--------------AWWPAAAGFTAGLVSKIAVYPVDTLKKRMQ 259
BLAST of mRNA_P-fluviatile_contig11.1232.1 vs. uniprot
Match: A0A2D4C4T9_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C4T9_PYTIN) HSP 1 Score: 136 bits (342), Expect = 3.670e-33 Identity = 104/310 (33.55%), Postives = 139/310 (44.84%), Query Frame = 3
Query: 297 AGATAGAVSRLLTAPFDVAKIRFQLD-------HGATRRYDSSLWVAMRSIYGEEGLIALWRGNLPAMLLWSAYTGVQFGVYEHLRSADFFGSRRKRPHDSXXXXXXXXSGSTAGVEPFFAEDSSGASGREGDNSRAREVEGKWVRGVRGEGGVEMDTKGERNLPPALANFAYGSIAAFIATVATYPLDITRTALAFQGVPKRYGSMSEFLSRTLRESGPRALFRGVTPTLAMITPQMGVSFAVWEALSRMPPPAIVTAVAPGSKPGGTTVAXXXXAAAWQL---GVGAAAGVAGKLAVFPLDTVKKRVQ 1196
AGA AG VSRL+ APFD+ KIRFQL H + +Y SL ++RSI+ EEGL + WRGNL A LW Y+ +QFG Y L +A W +M T+ + + + G+ A IAT+ TYPLD+ RT A QGVPKR+ +++ TL G R L+ G+ P L I P MG+SF ++ +L+ + A +PG W L G GAAAG+ K V+PLDTVKKR+Q
Sbjct: 16 AGAVAGGVSRLVAAPFDLVKIRFQLQQAPISSSHQGSAKY-VSLLQSVRSIHSEEGLRSFWRGNLAATKLWVGYSAIQFGSYRALNAA-------------------------------------------------------WS--------DDMRTQHK-----TVVSSVNGACAGVIATIVTYPLDLFRTIFASQGVPKRFPTLASLARHTLSTRGVRGLYSGIGPALFQIAPYMGLSFGIYSSLNAAIAEHNASIHAEPPRPGSLV---------WLLSYVGTGAAAGLLSKTVVYPLDTVKKRMQ 247
BLAST of mRNA_P-fluviatile_contig11.1232.1 vs. uniprot
Match: A0A7S3HFE2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HFE2_9STRA) HSP 1 Score: 136 bits (343), Expect = 4.410e-33 Identity = 108/319 (33.86%), Postives = 152/319 (47.65%), Query Frame = 3
Query: 258 LKSEALNVAFNGFAGATAGAVSRLLTAPFDVAKIRFQLDHGATRRYDSSLWVAMRSIYGEEGLIALWRGNLPAMLLWSAYTGVQFGVYEHLRSADFFGSRRKRPHDSXXXXXXXXSGSTAGVEPFFAEDSSGASGREGDNSRAREVEGKWVRGVRGEGGVEMDTKGERNLPPALANFAYGSIAAFIATVATYPLDITRTALAFQGVPKRYGSMSEFLSRTLRESGPRALFRGVTPTLAMITPQMGVSFAVWEALSR--MPPPAIVTAVAPGSKPGGTTVAXXXXAAAWQLGV-GAAAGVAGKLAVFPLDTVKKRVQTAV 1205
+KS+ + V + AGA AGA++R+++APFDV KIRFQL +Y S L ++R + EEG+++LW+GNL A LW +Y VQF +Y L+ FG + P SG+S + G+ + W A F G+ A + V TYP DI RT A QG + SM+ F++ T R +G + + G+ P + ITPQMG++FA +E MP P + + PG G A + GV G AAG KL V+PLDTVKKR+Q V
Sbjct: 15 IKSK-VKVTDDAVAGAAAGAIARMISAPFDVVKIRFQLQSQVNPKYKSVLQ-SLRIVVKEEGILSLWKGNLSASYLWISYMMVQFSMYGVLKR---FGEKIANPFQG-----------------------SGSSQKGGEKA--------WQ---------------------AFTQFLAGAGAGTASVVVTYPFDIMRTQFALQGQNVVFKSMASFIAHTYRTTGVKGFYAGLVPAMVGITPQMGLNFAFYETFRAIAMPEP---SPLKPGRSQGDKGQKDSFGWATLKKGVCGGAAGGLSKLIVYPLDTVKKRMQGQV 273
BLAST of mRNA_P-fluviatile_contig11.1232.1 vs. uniprot
Match: A0A329T089_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T089_9STRA) HSP 1 Score: 134 bits (337), Expect = 2.910e-32 Identity = 105/308 (34.09%), Postives = 138/308 (44.81%), Query Frame = 3
Query: 294 FAGATAGAVSRLLTAPFDVAKIRFQLD-----HGATRRYDSSLWVAMRSIYGEEGLIALWRGNLPAMLLWSAYTGVQFGVYEHLRSADFFGSRRKRPHDSXXXXXXXXSGSTAGVEPFFAEDSSGASGREGDNSRAREVEGKWVRGVRGEGGVEMDTKGERNLPPALANFAYGSIAAFIATVATYPLDITRTALAFQGVPKRYGSMSEFLSRTLRESGPRALFRGVTPTLAMITPQMGVSFAVWEALSRMPPPAIVTAVAPGSKP--GGTTVAXXXXAAAWQLGVGAAAGVAGKLAVFPLDTVKKRVQ 1196
FAGA +GAV+RL+ AP D+ KIRFQ+ +G + L A+RSIY EEGL + WRGNL A LW Y+ +QF Y RE+ +W R DT G P + A G++A ATV TYPLD+ RTA A QG+PKR+ +M + T G R + G+ T+ I P +G+SF ++ LS M +V SK T A +G GA AG+ KLAV+PLDTVKKR+Q
Sbjct: 18 FAGAVSGAVTRLVAAPLDLLKIRFQVQPAPIANGHVEAKYAGLLQAVRSIYAEEGLRSFWRGNLAASGLWVGYSALQFASY-------------------------------------------------------RELNRRWERSE------NSDTLGA---PAVVITAASGAVAGVTATVVTYPLDLFRTAFASQGMPKRFPTMHSLVLHTWATQGIRGFYSGLGATVFQIAPYIGLSFGIYSTLSEM-------SVKNRSKQEESETGAWLPLMTALSYVGNGAVAGLVSKLAVYPLDTVKKRMQ 254
BLAST of mRNA_P-fluviatile_contig11.1232.1 vs. uniprot
Match: T0RP14_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RP14_SAPDV) HSP 1 Score: 129 bits (324), Expect = 2.650e-31 Identity = 97/302 (32.12%), Postives = 131/302 (43.38%), Query Frame = 3
Query: 297 AGATAGAVSRLLTAPFDVAKIRFQLDHGATRRYD--SSLWVAMRSIYGEEGLIALWRGNLPAMLLWSAYTGVQFGVYEHLRSADFFGSRRKRPHDSXXXXXXXXSGSTAGVEPFFAEDSSGASGREGDNSRAREVEGKWVRGVRGEGGVEMDTKGERNLPPALANFAYGSIAAFIATVATYPLDITRTALAFQGVPKRYGSMSEFLSRTLRESGPRALFRGVTPTLAMITPQMGVSFAVWEALSRMPPPAIVTAVAPGSKPGGTTVAXXXXAAAWQLGVGAAAGVAGKLAVFPLDTVKKRVQ 1196
AGA AG +R+L AP D+ KIRFQ+ + +D + L A+ IYGEEG+ WRGN+ A LW +Y +QF Y+ L++A HD W G G+IA +ATVATYPLD+ RT LA QGVPK + +M F S GPR F+G++PT+ I P MG+SF ++ L+ + +T A +G GA AG KL V+PLDT+KKR+Q
Sbjct: 11 AGAVAGGATRVLAAPLDLLKIRFQVHAAPSTPHDLGTRLVRAVTHIYGEEGVRTFWRGNVAATGLWVSYAAIQFACYQSLQNAIV-------RHDHTLSWV-------------------------------------WYSGS-------------------------GAIAGVVATVATYPLDLCRTVLASQGVPKVFPNMRSFASHMYATQGPRGFFQGLSPTVLQIAPYMGLSFGIYSTLADL-----------------STTHPVLHA----VGNGAIAGFVSKLIVYPLDTIKKRMQ 222
BLAST of mRNA_P-fluviatile_contig11.1232.1 vs. uniprot
Match: W7TK57_9STRA (Mitochondrial deoxynucleotide carrier n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TK57_9STRA) HSP 1 Score: 131 bits (330), Expect = 3.390e-31 Identity = 106/317 (33.44%), Postives = 141/317 (44.48%), Query Frame = 3
Query: 300 GATAGAVSRLLTAPFDVAKIRFQLDHGAT-------RRYDSSLWVAMRSIYGEEGLIALWRGNLPAMLLWSAYTGVQFGVYEHLRSADFFGSRRKRPHDSXXXXXXXXSGSTAGVEPFFAEDSSGASGREGDNSRAREVEGKWVRGVRGEGGVEMDTKGERNLPPALANFAYGSIAAFIATVATYPLDITRTALAFQGVPKRYGSMSEFLSRTLRESGPRALFRGVTPTLAMITPQMGVSFAVWEALSRMPPPAIVTAVAPGS---KPGGTT-----VAXXXXAAAWQLGVGAAAGVAGKLAVFPLDTVKKRVQTAV 1205
GA AG SR+LTAPFDV KIRFQL G+ R S+ ++R + EEG+I LWRGNL A LW Y V F VYE L+ ++ G L P +A+F G +A ATVATYP D+ RT A QG+P+ + +M+ F+ TLR G LF G+ PT I P+MG+SFA++E LS APG + GGT V +A + G +G A ++AV+PLDT+K+R+Q V
Sbjct: 32 GAAAGGASRILTAPFDVLKIRFQLQVGSIATALDRQRLAYRSVLSSLRKVITEEGVIGLWRGNLAATYLWIGYGAVHFPVYEALK---------------------------------------------------------------------VELAGLPALAP-VASFLAGGLAGLAATVATYPFDVIRTQFAAQGLPRAHETMASFVESTLRREGLHGLFLGLAPTALQIFPRMGLSFALYEWLSGPYQSGEQNKKAPGKAEREAGGTEDWWEDVQRGCRSALY----GGVSGGAARVAVYPLDTLKRRMQAQV 274
BLAST of mRNA_P-fluviatile_contig11.1232.1 vs. uniprot
Match: A0A0N7L4J1_PLAHL (Mitochondrial thiamine pyrophosphate carrier-like n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L4J1_PLAHL) HSP 1 Score: 129 bits (325), Expect = 1.030e-30 Identity = 93/305 (30.49%), Postives = 135/305 (44.26%), Query Frame = 3
Query: 297 AGATAGAVSRLLTAPFDVAKIRFQLD-----HGATRRYDSSLWVAMRSIYGEEGLIALWRGNLPAMLLWSAYTGVQFGVYEHLRSADFFGSRRKRPHDSXXXXXXXXSGSTAGVEPFFAEDSSGASGREGDNSRAREVEGKWVRGVRGEGGVEMDTKGERNLPPALANFAYGSIAAFIATVATYPLDITRTALAFQGVPKRYGSMSEFLSRTLRESGPRALFRGVTPTLAMITPQMGVSFAVWEALSRMPPPAIVTAVAPGSKPGGTTVAXXXXAAAWQLGVGAAAGVAGKLAVFPLDTVKKRVQ 1196
AGA +G ++RL+ AP D+ KIRFQ+ +G S+ ++RSIYGEEGL + WRGNL A +LW +Y+ +QF Y L +W + + K N+P + G++A ATV TYPLD RTA A QGVPK + +M + G R + G+ T+ I P +G++F+++ L+ M KP TT++ +G GA AG+ KLAV+PLDT+KKR+Q
Sbjct: 15 AGAVSGGITRLVAAPLDLLKIRFQVQPAPIGNGHVEARYLSVAQSVRSIYGEEGLRSFWRGNLAATVLWVSYSALQFATYRGLN--------------------------------------------------------RWWE--------QSEVKDTINVPKVAVSATSGAVAGVTATVLTYPLDFFRTAFAGQGVPKTFPTMYSLMVHIWTTQGFRGFYSGLGATVVQIAPYIGLTFSIYSCLNEMQESHQKEDETGAWKPVATTLS--------YIGSGAVAGIVSKLAVYPLDTIKKRMQ 247 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1232.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig11.1232.1 >prot_P-fluviatile_contig11.1232.1 ID=prot_P-fluviatile_contig11.1232.1|Name=mRNA_P-fluviatile_contig11.1232.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=338bp MRNDEHDGFTTGLKSEALNVAFNGFAGATAGAVSRLLTAPFDVAKIRFQLback to top mRNA from alignment at P-fluviatile_contig11:2764129..2769549+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig11.1232.1 ID=mRNA_P-fluviatile_contig11.1232.1|Name=mRNA_P-fluviatile_contig11.1232.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5421bp|location=Sequence derived from alignment at P-fluviatile_contig11:2764129..2769549+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig11:2764129..2769549+ >mRNA_P-fluviatile_contig11.1232.1 ID=mRNA_P-fluviatile_contig11.1232.1|Name=mRNA_P-fluviatile_contig11.1232.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2028bp|location=Sequence derived from alignment at P-fluviatile_contig11:2764129..2769549+ (Porterinema fluviatile SAG_2381)back to top |