mRNA_P-fluviatile_contig11.1232.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig11.1232.1
Unique NamemRNA_P-fluviatile_contig11.1232.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig11.1232.1 vs. uniprot
Match: D8LK96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK96_ECTSI)

HSP 1 Score: 352 bits (904), Expect = 1.540e-116
Identity = 212/340 (62.35%), Postives = 226/340 (66.47%), Query Frame = 3
Query:  222 MRNDEHDG-----FTTGLKSEALNVAFNGFAGATAGAVSRLLTAPFDVAKIRFQLDHGATRRYDSSLWVAMRSIYGEEGLIALWRGNLPAMLLWSAYTGVQFGVYEHLRSADFFGSRRKRPHDSXXXXXXXXSGSTAGVEPFFAEDSSGASGREGDNSRAREVEGKWVRGVR-GEGGVE-----MDTKGERNLPPALANFAYGSIAAFIATVATYPLDITRTALAFQGVPKRYGSMSEFLSRTLRESGPRALFRGVTPTLAMITPQMGVSFAVWEALSRMPPPAIVTAVAPGSKPGGTTVAXXXXAAAWQLGVGAAAGVAGKLAVFPLDTVKKRVQTAVR 1208
            M   E DG      T  L S+AL VA NGFAGATAGAVSR+LTAP DVAKIRFQLDHGATRRYDS+LW AMRSIYGEEGL+ LWRGNLPAM LWSAYT VQF  YE LR+ DF    R R HDS        SG            SS    R G   R  +V G W  G R GE   +      D +G R LPPALANFAYG++AAF ATV TYPLDITRTALAFQGVPKRY SMSEFL RT RESG R LFRG TPTLAMITPQMGVSFAVWEAL    PP   +    G+ P  T         +WQLG G  AG+ GKL VFPLDTVKKRVQTAVR
Sbjct:    1 MNTREQDGEPCAALTAVLTSKALEVARNGFAGATAGAVSRVLTAPLDVAKIRFQLDHGATRRYDSTLWAAMRSIYGEEGLVTLWRGNLPAMFLWSAYTAVQFSAYEQLRATDFL---RSRQHDSSV------SGGGVRHRGSICPSSSPPHERRGAG-RVGKVGGGWRTGGREGESPCQARRRQQDGRG-RGLPPALANFAYGAMAAFTATVVTYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPPAFSGSGSGASPAATL--------SWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVR 321          
BLAST of mRNA_P-fluviatile_contig11.1232.1 vs. uniprot
Match: A0A6H5KH83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH83_9PHAE)

HSP 1 Score: 338 bits (867), Expect = 3.640e-110
Identity = 202/331 (61.03%), Postives = 224/331 (67.67%), Query Frame = 3
Query:  246 FTTGLKSEALNVAFNGFAGATAGAVSRLLTAPFDVAKIRFQLDHGATRRYDSSLWVAMRSIYGEEGLIALWRGNLPAMLLWSAYTGVQFGVYEHLRSADFFGSRRKRPHDSXXXXXXXXSGSTAGVEPFFAEDSSGASGREGDNSRAREVEGKWVRGVRGEGGVE-----MDTKGERNLPPALANFAYGSIAAFIATVATYPLDITRTALAFQGVPKRYGSMSEFLSRTLRESGPRALFRGVTPTLAMITPQMGVSFAVWEALSRMPPPAIVTAVAPGSKPGGTTVAXXXXAAAWQLGVGAAAGVAGKLAVFPLDTVKKRVQTAVRIEASN 1223
             T  L S+AL VA +GFAGATAGAVSR+LTAP DVAKIRFQLDHGATRRYDS+LW AMRSIYGEEGL+ LWRGNLPAM LW+AYT VQF  YE LR+ DF  SR+   H+S         GS+          SS    R G   R  EV G    G  GE   +      D +G R LPPALANF YG++AAF AT+ TYPLDITRTALAFQGVPKRY SMSEFL RT RESG R LFRG TPTLAMITPQMGVSFAVWEAL         T  AP +  G  + A      +WQLG G  AG+ GKL VFPLDTVKKRVQTAV +E ++
Sbjct:   32 LTAVLTSKALEVARSGFAGATAGAVSRVLTAPLDVAKIRFQLDHGATRRYDSTLWAAMRSIYGEEGLVTLWRGNLPAMFLWAAYTAVQFSAYEQLRATDFLLSRQ---HNSVSGGGVRYRGSSC-------PSSSSPHERRGAG-RVGEVGGWRTGGREGENQYQALRRQQDGRG-RGLPPALANFVYGAMAAFTATLVTYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGVRGLFRGATPTLAMITPQMGVSFAVWEAL---------TGGAPRAFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVMMERNS 341          
BLAST of mRNA_P-fluviatile_contig11.1232.1 vs. uniprot
Match: A0A836C8L1_9STRA (Mitochondrial substrate/solute carrier n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8L1_9STRA)

HSP 1 Score: 160 bits (406), Expect = 1.640e-42
Identity = 119/308 (38.64%), Postives = 149/308 (48.38%), Query Frame = 3
Query:  288 NGFAGATAGAVSRLLTAPFDVAKIRFQLDHG-ATRRYDSSLWVAMRSIYGEEGLIALWRGNLPAMLLWSAYTGVQFGVYEHLRSADFFGSRRKRPHDSXXXXXXXXSGSTAGVEPFFAEDSSGASGREGDNSRAREVEGKWVRGVRGEGGVEMDTKGERNLPPALANFAYGSIAAFIATVATYPLDITRTALAFQGVPKRYGSMSEFLSRTLRESGPRALFRGVTPTLAMITPQMGVSFAVWEALSRMPPPAIVTAVAPGSKPGGTTVAXXXXAAAWQLGV-GAAAGVAGKLAVFPLDTVKKRVQTAV 1205
            N  AG  AGAVSR+ TAP DVAKIR QLD G A+ RY  SL    RS+Y EEGLI LWRGN  AM LW AYT VQFG+Y  +R A                     S S A                    +R R+ +                             F  G+ AA +AT  TYPLD+ RTA A QGVP+R+ ++  F + TL  +G R  + G++  L  + PQMG++F  +EA+   PP A+  A APG              A W  GV G +AG+  K  V+PLDT+KKRVQ  V
Sbjct:   18 NAVAGGVAGAVSRISTAPLDVAKIRCQLDGGKASPRY-GSLLKTFRSVYAEEGLIGLWRGNPAAMALWIAYTAVQFGLYPLVRDA--------------------LSASRASAY-----------------ARPRQTD----------------------------KFLAGAAAACVATTCTYPLDVMRTAFAGQGVPRRHPTLRAFAANTLHVAGVRGFYAGLSAALVQVAPQMGIAFMAYEAVKDHPPQAL--AAAPGL-------------ATWWPGVAGFSAGLLSKTVVYPLDTLKKRVQARV 244          
BLAST of mRNA_P-fluviatile_contig11.1232.1 vs. uniprot
Match: A0A836C9B4_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9B4_9STRA)

HSP 1 Score: 159 bits (401), Expect = 1.670e-41
Identity = 109/302 (36.09%), Postives = 149/302 (49.34%), Query Frame = 3
Query:  294 FAGATAGAVSRLLTAPFDVAKIRFQLDHG-ATRRYDSSLWVAMRSIYGEEGLIALWRGNLPAMLLWSAYTGVQFGVYEHLRSADFFGSRRKRPHDSXXXXXXXXSGSTAGVEPFFAEDSSGASGREGDNSRAREVEGKWVRGVRGEGGVEMDTKGERNLPPALANFAYGSIAAFIATVATYPLDITRTALAFQGVPKRYGSMSEFLSRTLRESGPRALFRGVTPTLAMITPQMGVSFAVWEALSRMPPPAIVTAVAPGSKPGGTTVAXXXXAAAWQLGVGAAAGVAGKLAVFPLDTVKKRVQ 1196
            FAG  +GAVSRL TAP DVAKIR QLD G  + RYD  L +  RS+Y EEGL++LWRG+  AM+LW +Y+GVQFGVY                                   P F                 R +  +W R    E       + +R        F  G+ A  +AT ATYP D+ RTA A QGVP+++ ++  F++ TLR  G R L+ G+TP +  + PQ+G++F  +EA+    P A+    A G              A W    G  AG+  K+AV+P+DT+KKR+Q
Sbjct:   33 FAGCVSGAVSRLATAPLDVAKIRCQLDGGRGSARYDGLL-MTFRSVYAEEGLVSLWRGSPAAMMLWVSYSGVQFGVY-----------------------------------PVF-----------------RRLLMRWRRWAHQEEASLFLQQRDR--------FLAGAAAGCVATTATYPFDVMRTAFAGQGVPRQHETLHAFVAGTLRTKGARGLYAGLTPAIMQMAPQIGIAFVCYEAMRDNVPAALRALPAVG--------------AWWPAAAGFTAGLVSKIAVYPVDTLKKRMQ 259          
BLAST of mRNA_P-fluviatile_contig11.1232.1 vs. uniprot
Match: A0A2D4C4T9_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C4T9_PYTIN)

HSP 1 Score: 136 bits (342), Expect = 3.670e-33
Identity = 104/310 (33.55%), Postives = 139/310 (44.84%), Query Frame = 3
Query:  297 AGATAGAVSRLLTAPFDVAKIRFQLD-------HGATRRYDSSLWVAMRSIYGEEGLIALWRGNLPAMLLWSAYTGVQFGVYEHLRSADFFGSRRKRPHDSXXXXXXXXSGSTAGVEPFFAEDSSGASGREGDNSRAREVEGKWVRGVRGEGGVEMDTKGERNLPPALANFAYGSIAAFIATVATYPLDITRTALAFQGVPKRYGSMSEFLSRTLRESGPRALFRGVTPTLAMITPQMGVSFAVWEALSRMPPPAIVTAVAPGSKPGGTTVAXXXXAAAWQL---GVGAAAGVAGKLAVFPLDTVKKRVQ 1196
            AGA AG VSRL+ APFD+ KIRFQL        H  + +Y  SL  ++RSI+ EEGL + WRGNL A  LW  Y+ +QFG Y  L +A                                                       W          +M T+ +      + +   G+ A  IAT+ TYPLD+ RT  A QGVPKR+ +++     TL   G R L+ G+ P L  I P MG+SF ++ +L+        +  A   +PG            W L   G GAAAG+  K  V+PLDTVKKR+Q
Sbjct:   16 AGAVAGGVSRLVAAPFDLVKIRFQLQQAPISSSHQGSAKY-VSLLQSVRSIHSEEGLRSFWRGNLAATKLWVGYSAIQFGSYRALNAA-------------------------------------------------------WS--------DDMRTQHK-----TVVSSVNGACAGVIATIVTYPLDLFRTIFASQGVPKRFPTLASLARHTLSTRGVRGLYSGIGPALFQIAPYMGLSFGIYSSLNAAIAEHNASIHAEPPRPGSLV---------WLLSYVGTGAAAGLLSKTVVYPLDTVKKRMQ 247          
BLAST of mRNA_P-fluviatile_contig11.1232.1 vs. uniprot
Match: A0A7S3HFE2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HFE2_9STRA)

HSP 1 Score: 136 bits (343), Expect = 4.410e-33
Identity = 108/319 (33.86%), Postives = 152/319 (47.65%), Query Frame = 3
Query:  258 LKSEALNVAFNGFAGATAGAVSRLLTAPFDVAKIRFQLDHGATRRYDSSLWVAMRSIYGEEGLIALWRGNLPAMLLWSAYTGVQFGVYEHLRSADFFGSRRKRPHDSXXXXXXXXSGSTAGVEPFFAEDSSGASGREGDNSRAREVEGKWVRGVRGEGGVEMDTKGERNLPPALANFAYGSIAAFIATVATYPLDITRTALAFQGVPKRYGSMSEFLSRTLRESGPRALFRGVTPTLAMITPQMGVSFAVWEALSR--MPPPAIVTAVAPGSKPGGTTVAXXXXAAAWQLGV-GAAAGVAGKLAVFPLDTVKKRVQTAV 1205
            +KS+ + V  +  AGA AGA++R+++APFDV KIRFQL      +Y S L  ++R +  EEG+++LW+GNL A  LW +Y  VQF +Y  L+    FG +   P                          SG+S + G+ +        W                      A   F  G+ A   + V TYP DI RT  A QG    + SM+ F++ T R +G +  + G+ P +  ITPQMG++FA +E      MP P   + + PG   G          A  + GV G AAG   KL V+PLDTVKKR+Q  V
Sbjct:   15 IKSK-VKVTDDAVAGAAAGAIARMISAPFDVVKIRFQLQSQVNPKYKSVLQ-SLRIVVKEEGILSLWKGNLSASYLWISYMMVQFSMYGVLKR---FGEKIANPFQG-----------------------SGSSQKGGEKA--------WQ---------------------AFTQFLAGAGAGTASVVVTYPFDIMRTQFALQGQNVVFKSMASFIAHTYRTTGVKGFYAGLVPAMVGITPQMGLNFAFYETFRAIAMPEP---SPLKPGRSQGDKGQKDSFGWATLKKGVCGGAAGGLSKLIVYPLDTVKKRMQGQV 273          
BLAST of mRNA_P-fluviatile_contig11.1232.1 vs. uniprot
Match: A0A329T089_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T089_9STRA)

HSP 1 Score: 134 bits (337), Expect = 2.910e-32
Identity = 105/308 (34.09%), Postives = 138/308 (44.81%), Query Frame = 3
Query:  294 FAGATAGAVSRLLTAPFDVAKIRFQLD-----HGATRRYDSSLWVAMRSIYGEEGLIALWRGNLPAMLLWSAYTGVQFGVYEHLRSADFFGSRRKRPHDSXXXXXXXXSGSTAGVEPFFAEDSSGASGREGDNSRAREVEGKWVRGVRGEGGVEMDTKGERNLPPALANFAYGSIAAFIATVATYPLDITRTALAFQGVPKRYGSMSEFLSRTLRESGPRALFRGVTPTLAMITPQMGVSFAVWEALSRMPPPAIVTAVAPGSKP--GGTTVAXXXXAAAWQLGVGAAAGVAGKLAVFPLDTVKKRVQ 1196
            FAGA +GAV+RL+ AP D+ KIRFQ+      +G      + L  A+RSIY EEGL + WRGNL A  LW  Y+ +QF  Y                                                       RE+  +W R          DT G    P  +   A G++A   ATV TYPLD+ RTA A QG+PKR+ +M   +  T    G R  + G+  T+  I P +G+SF ++  LS M       +V   SK     T        A   +G GA AG+  KLAV+PLDTVKKR+Q
Sbjct:   18 FAGAVSGAVTRLVAAPLDLLKIRFQVQPAPIANGHVEAKYAGLLQAVRSIYAEEGLRSFWRGNLAASGLWVGYSALQFASY-------------------------------------------------------RELNRRWERSE------NSDTLGA---PAVVITAASGAVAGVTATVVTYPLDLFRTAFASQGMPKRFPTMHSLVLHTWATQGIRGFYSGLGATVFQIAPYIGLSFGIYSTLSEM-------SVKNRSKQEESETGAWLPLMTALSYVGNGAVAGLVSKLAVYPLDTVKKRMQ 254          
BLAST of mRNA_P-fluviatile_contig11.1232.1 vs. uniprot
Match: T0RP14_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RP14_SAPDV)

HSP 1 Score: 129 bits (324), Expect = 2.650e-31
Identity = 97/302 (32.12%), Postives = 131/302 (43.38%), Query Frame = 3
Query:  297 AGATAGAVSRLLTAPFDVAKIRFQLDHGATRRYD--SSLWVAMRSIYGEEGLIALWRGNLPAMLLWSAYTGVQFGVYEHLRSADFFGSRRKRPHDSXXXXXXXXSGSTAGVEPFFAEDSSGASGREGDNSRAREVEGKWVRGVRGEGGVEMDTKGERNLPPALANFAYGSIAAFIATVATYPLDITRTALAFQGVPKRYGSMSEFLSRTLRESGPRALFRGVTPTLAMITPQMGVSFAVWEALSRMPPPAIVTAVAPGSKPGGTTVAXXXXAAAWQLGVGAAAGVAGKLAVFPLDTVKKRVQ 1196
            AGA AG  +R+L AP D+ KIRFQ+    +  +D  + L  A+  IYGEEG+   WRGN+ A  LW +Y  +QF  Y+ L++A          HD                                           W  G                          G+IA  +ATVATYPLD+ RT LA QGVPK + +M  F S      GPR  F+G++PT+  I P MG+SF ++  L+ +                 +T      A    +G GA AG   KL V+PLDT+KKR+Q
Sbjct:   11 AGAVAGGATRVLAAPLDLLKIRFQVHAAPSTPHDLGTRLVRAVTHIYGEEGVRTFWRGNVAATGLWVSYAAIQFACYQSLQNAIV-------RHDHTLSWV-------------------------------------WYSGS-------------------------GAIAGVVATVATYPLDLCRTVLASQGVPKVFPNMRSFASHMYATQGPRGFFQGLSPTVLQIAPYMGLSFGIYSTLADL-----------------STTHPVLHA----VGNGAIAGFVSKLIVYPLDTIKKRMQ 222          
BLAST of mRNA_P-fluviatile_contig11.1232.1 vs. uniprot
Match: W7TK57_9STRA (Mitochondrial deoxynucleotide carrier n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TK57_9STRA)

HSP 1 Score: 131 bits (330), Expect = 3.390e-31
Identity = 106/317 (33.44%), Postives = 141/317 (44.48%), Query Frame = 3
Query:  300 GATAGAVSRLLTAPFDVAKIRFQLDHGAT-------RRYDSSLWVAMRSIYGEEGLIALWRGNLPAMLLWSAYTGVQFGVYEHLRSADFFGSRRKRPHDSXXXXXXXXSGSTAGVEPFFAEDSSGASGREGDNSRAREVEGKWVRGVRGEGGVEMDTKGERNLPPALANFAYGSIAAFIATVATYPLDITRTALAFQGVPKRYGSMSEFLSRTLRESGPRALFRGVTPTLAMITPQMGVSFAVWEALSRMPPPAIVTAVAPGS---KPGGTT-----VAXXXXAAAWQLGVGAAAGVAGKLAVFPLDTVKKRVQTAV 1205
            GA AG  SR+LTAPFDV KIRFQL  G+        R    S+  ++R +  EEG+I LWRGNL A  LW  Y  V F VYE L+                                                                     ++  G   L P +A+F  G +A   ATVATYP D+ RT  A QG+P+ + +M+ F+  TLR  G   LF G+ PT   I P+MG+SFA++E LS           APG    + GGT      V     +A +    G  +G A ++AV+PLDT+K+R+Q  V
Sbjct:   32 GAAAGGASRILTAPFDVLKIRFQLQVGSIATALDRQRLAYRSVLSSLRKVITEEGVIGLWRGNLAATYLWIGYGAVHFPVYEALK---------------------------------------------------------------------VELAGLPALAP-VASFLAGGLAGLAATVATYPFDVIRTQFAAQGLPRAHETMASFVESTLRREGLHGLFLGLAPTALQIFPRMGLSFALYEWLSGPYQSGEQNKKAPGKAEREAGGTEDWWEDVQRGCRSALY----GGVSGGAARVAVYPLDTLKRRMQAQV 274          
BLAST of mRNA_P-fluviatile_contig11.1232.1 vs. uniprot
Match: A0A0N7L4J1_PLAHL (Mitochondrial thiamine pyrophosphate carrier-like n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L4J1_PLAHL)

HSP 1 Score: 129 bits (325), Expect = 1.030e-30
Identity = 93/305 (30.49%), Postives = 135/305 (44.26%), Query Frame = 3
Query:  297 AGATAGAVSRLLTAPFDVAKIRFQLD-----HGATRRYDSSLWVAMRSIYGEEGLIALWRGNLPAMLLWSAYTGVQFGVYEHLRSADFFGSRRKRPHDSXXXXXXXXSGSTAGVEPFFAEDSSGASGREGDNSRAREVEGKWVRGVRGEGGVEMDTKGERNLPPALANFAYGSIAAFIATVATYPLDITRTALAFQGVPKRYGSMSEFLSRTLRESGPRALFRGVTPTLAMITPQMGVSFAVWEALSRMPPPAIVTAVAPGSKPGGTTVAXXXXAAAWQLGVGAAAGVAGKLAVFPLDTVKKRVQ 1196
            AGA +G ++RL+ AP D+ KIRFQ+      +G       S+  ++RSIYGEEGL + WRGNL A +LW +Y+ +QF  Y  L                                                         +W          + + K   N+P    +   G++A   ATV TYPLD  RTA A QGVPK + +M   +       G R  + G+  T+  I P +G++F+++  L+ M             KP  TT++         +G GA AG+  KLAV+PLDT+KKR+Q
Sbjct:   15 AGAVSGGITRLVAAPLDLLKIRFQVQPAPIGNGHVEARYLSVAQSVRSIYGEEGLRSFWRGNLAATVLWVSYSALQFATYRGLN--------------------------------------------------------RWWE--------QSEVKDTINVPKVAVSATSGAVAGVTATVLTYPLDFFRTAFAGQGVPKTFPTMYSLMVHIWTTQGFRGFYSGLGATVVQIAPYIGLTFSIYSCLNEMQESHQKEDETGAWKPVATTLS--------YIGSGAVAGIVSKLAVYPLDTIKKRMQ 247          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1232.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK96_ECTSI1.540e-11662.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KH83_9PHAE3.640e-11061.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C8L1_9STRA1.640e-4238.64Mitochondrial substrate/solute carrier n=1 Tax=Tri... [more]
A0A836C9B4_9STRA1.670e-4136.09Mitochondrial carrier domain-containing protein n=... [more]
A0A2D4C4T9_PYTIN3.670e-3333.55Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A7S3HFE2_9STRA4.410e-3333.86Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A329T089_9STRA2.910e-3234.09Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
T0RP14_SAPDV2.650e-3132.12Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
W7TK57_9STRA3.390e-3133.44Mitochondrial deoxynucleotide carrier n=3 Tax=Mono... [more]
A0A0N7L4J1_PLAHL1.030e-3030.49Mitochondrial thiamine pyrophosphate carrier-like ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig11contigP-fluviatile_contig11:2764129..2769549 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score359.0
Seed ortholog evalue2.4e-96
Seed eggNOG ortholog2880.D8LK96
KEGG koko:K15108
KEGG TC2.A.29.16,2.A.29.28
EggNOG free text desc.mitochondrial transport
EggNOG OGsKOG0752@1,KOG0752@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionMitochondrial carrier domain
Ec32 orthologEc-16_002560.1
Exons5
Model size1235
Cds size1014
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig11.1232.1prot_P-fluviatile_contig11.1232.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig11 2764350..2769549 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815471.490796-UTR-P-fluviatile_contig11:2764128..27643491622815471.490796-UTR-P-fluviatile_contig11:2764128..2764349Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 2764129..2764349 +
1693561940.7054682-UTR-P-fluviatile_contig11:2764128..27643491693561940.7054682-UTR-P-fluviatile_contig11:2764128..2764349Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 2764129..2764349 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815471.509525-CDS-P-fluviatile_contig11:2764349..27644431622815471.509525-CDS-P-fluviatile_contig11:2764349..2764443Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2764350..2764443 +
1693561940.7188575-CDS-P-fluviatile_contig11:2764349..27644431693561940.7188575-CDS-P-fluviatile_contig11:2764349..2764443Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2764350..2764443 +
1622815471.5297372-CDS-P-fluviatile_contig11:2765653..27656991622815471.5297372-CDS-P-fluviatile_contig11:2765653..2765699Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2765654..2765699 +
1693561940.7289224-CDS-P-fluviatile_contig11:2765653..27656991693561940.7289224-CDS-P-fluviatile_contig11:2765653..2765699Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2765654..2765699 +
1622815471.5447605-CDS-P-fluviatile_contig11:2766219..27663181622815471.5447605-CDS-P-fluviatile_contig11:2766219..2766318Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2766220..2766318 +
1693561940.7362046-CDS-P-fluviatile_contig11:2766219..27663181693561940.7362046-CDS-P-fluviatile_contig11:2766219..2766318Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2766220..2766318 +
1622815471.5568316-CDS-P-fluviatile_contig11:2767882..27682911622815471.5568316-CDS-P-fluviatile_contig11:2767882..2768291Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2767883..2768291 +
1693561944.0648012-CDS-P-fluviatile_contig11:2767882..27682911693561944.0648012-CDS-P-fluviatile_contig11:2767882..2768291Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2767883..2768291 +
1622815471.5728865-CDS-P-fluviatile_contig11:2769183..27695491622815471.5728865-CDS-P-fluviatile_contig11:2769183..2769549Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2769184..2769549 +
1693561947.0471659-CDS-P-fluviatile_contig11:2769183..27695491693561947.0471659-CDS-P-fluviatile_contig11:2769183..2769549Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2769184..2769549 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig11.1232.1

>prot_P-fluviatile_contig11.1232.1 ID=prot_P-fluviatile_contig11.1232.1|Name=mRNA_P-fluviatile_contig11.1232.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=338bp
MRNDEHDGFTTGLKSEALNVAFNGFAGATAGAVSRLLTAPFDVAKIRFQL
DHGATRRYDSSLWVAMRSIYGEEGLIALWRGNLPAMLLWSAYTGVQFGVY
EHLRSADFFGSRRKRPHDSSGGGGGGGSGSTAGVEPFFAEDSSGASGREG
DNSRAREVEGKWVRGVRGEGGVEMDTKGERNLPPALANFAYGSIAAFIAT
VATYPLDITRTALAFQGVPKRYGSMSEFLSRTLRESGPRALFRGVTPTLA
MITPQMGVSFAVWEALSRMPPPAIVTAVAPGSKPGGTTVAATAAAAAWQL
GVGAAAGVAGKLAVFPLDTVKKRVQTAVRIEASNAVS*
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mRNA from alignment at P-fluviatile_contig11:2764129..2769549+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig11.1232.1 ID=mRNA_P-fluviatile_contig11.1232.1|Name=mRNA_P-fluviatile_contig11.1232.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5421bp|location=Sequence derived from alignment at P-fluviatile_contig11:2764129..2769549+ (Porterinema fluviatile SAG_2381)
AGTCAAACATTCACTGTTGAGTGTCTGCAGCAGTAACTGGCTTCGAAGCA CCCTCATCAGGACAGCTGCAGCTCACTTGCTGCAGTTATCTCGTCGGATA CGGCGGGTCCGCCAGGAAACTCGAGCACAGAGAGTGGAAACCCGAAGTGC AAACTGCCTCTTGCTGTTTTCCTTACTGTAGCAGCGCGCCAGCACAGGCC CCCGCCACCGGCCCCAACCAAATGCGGAACGACGAACACGACGGATTCAC AACCGGGCTCAAATCGGAGGCACTCAATGTTGCGTTCAATGGCTTCGCCG GGGCGACAGCTGGAGGTGAGGGGTCTGCTGCTTCGCGAACAAACATCTCG CCGCATCACCGATACACTGCTGTAAGCCAGGCACAGAGCTCTCTCTCACT CTCCCCTCCCTCTACTGTGCCCTTTTGCAGTGCATGTCCATGACTTTTCA GGGACGTTTCGCTCGTTGACACCCCCGAATAGCCTTTGCACGTCGTGAAT CGTCGAGATAACCCTCGATTAATCTCTACAGCGTGTGTCAGCAGTTGTAT CGAAATGGTGAAGTTGCGCACACCCGCTCCACGAACGCAGCAGTGTCTCT CTACTTCTTCGCCGGATCTCCGCTGTGAGGATGATCACTTCACTTCAACA TTTTCTCTCGCATGTGTGTATGCAGCGGTGAGAAAGCTTGTCTTCACTGC CACCAGTAGCAGCAATAGAGGTGAAAGTGGTAGCAACAGCGCCGGCGGCT GGACAGCAATAGCAGAAGCACGCGGTCCCTCATGATTGCCGGTTCCGTCA CGTCGGCGTTCTTGCAGCTTTTGGAAAGACGCCTCGGGACCAAGACGAGA GAGCTGCTTGCGTCGCGTGCCCTTGAGAAAGCGGCAGCATGGATCTATCC ATGAAAGTATGCACACGTCTTGAGCACTGCTGCTTATGTTTTTTCTGGCA GAAAGCGATAGATGCGCGCTCGCGCCGTCCTCCAACTGTTTTCAGCTTCG AACTCAACGGGAGAGAGACCGTGCAACAGATCCAAGAGCCGCCTCCGACG GACGCCGCTCGATCTTTCAACCACAGGCTTGTACTCCGTAGGCGGCTGCG GCATCTCGAGACCGAAATTGTTGAAGTAGCAGTTTGTGCATCCGACTCGA TCATAAAGTCGACCGGTGTGAACGCTATAATGTGCTCGAGGTTTCCATGA GGTTACGATTTGTTCCTGGAGGTGTACCCAGGCACGAAGGAAATGGCAAA GAAGCACCGGGTACTGTCGCGGACTTTTGCACGCATACGCTAATAGTACG TCTCCAACAGACAGGAGACGGCGTTAGCATGTACGGCAGGGAAAAAGGTT CGGCAGCTTGTGCAATGACCGTTCGCGCGCCATGTCTGCTCCCTTCACCT CCTATCCTTCTCCCGTGCCCCGTTCGCCCTGCCCGCCCCCTCCTCTGGCC TGCCGTTCTCTTTATCCTCTCGCACCTCCTCCCCTCGGGGGTGTCTCTTC TCTTGTAACTGCGGCACCCCCGAAGCGGTTTCTCGCCTGCTCACCGCTCC GTTCGACGTCGCGAAGATAAGGTGAAGACCGTCAGTATCGTTCGCATGTG TCGTTCGAGCTCGTGGTAAACGCATTCGTTACAACGCAAAACGCGGAATG AATGTCGCCACATTCAGGAAATCCACGGGTGTGACACGGTGGTGGCAACG AGAGACAAAAGACCGAGCACGAGGGGACTAGCAAAATAGTAGGGGAAAAC AACAAAAGCGATGTGTTCCCGAGATTGTCTCAATAAGAAGCGAGTCCCCG TGATGTAGTCAGCGCACTGCAAGAAGAAGCAGGAAAGGTCAACGGCTCGG GCATACAACGCGTGCACGCCCCCGGTTCCCCCCTCCCCGCCCCTCTCCTT CTCGCCCCGCCCCCCTCCCTGACCCCACTCGTCCTCTTCAAACCAGCGCA TTCGACGTTAGCTTCGATCAACCCATCGATCAGATTGTTCCTTTTGTCGC TGCTAGTGTCATTCGTACGTTCATTCCACACACTTTTGTGCGGATTGTTT CCTTCGCCTGTCGGGTTGGCTGCTAAACGTTGTGAAAAAAGGTTCCAGCT GGACCATGGCGCGACCCGGCGGTACGACTCGAGCTTGTGGGTGGCGATGC GCAGCATCTACGGGGAGGAGGGGCTCATCGCCCTGTGGAGGTGCGCGCGC GAATGCTCGGCTTTCCGGGTTTGATCTTTTGTCCATATTCTCTCTCCTCC TACTTGTTTTACTGTTTCTCGCCCTCTCGCTCTTGGCCTCATCTTTGTTC CAGATTCTCTCGCACTCCTCTGGGACCACGATGATGCCGTTGCTGTTCTT ATGTGAGGGTAGGCGGGCGGGCAGAAGGGCAGGCGCTACTCTGTTCTTGC CGATCTCGCTCGGATGCTGTGGATAAATGTTTTTGTCCATCTCATCCCAC GGGCGTTGTTCCGCTCGCCGCCAACCAGACCAGGCGAGACCAGATGCAGA GTTTGCTTTTTATGGAGCTGGGGTACCTGAAGGCGGGTGCGCCTGATTCG GTACATCGCCGGCTTTTCTTGCGCTTGGTCGAGGGCCAAGTTCGTCCGCA CTCTTGGCGCTGCTGGCTGCGCTGACTCAGGGCGATGGTGTTATGACACT GCAGACCTATCATTTTACGCCTTGTTGCCTCAAACTACGGTATGCACCAC AGCCCCCCAGGAGCTCTTCTTGCAGGGCAAAGGCTCATCGTGACGATGAG GTGCAGGGTCCCAAAGGGCTGCTACGGAAATATCCATGAAGAAGCTTCAA AACGTTTGGTTTTTGCATTTGTGCCTGCTCGCAGATCAGCAATTGATGTT TGAAAATCGACTCAAGCGGGTCTGGTATACTCTGTCGTTCGCGGTCTGGT ACGGTCACGTCGTGGGCGCGTCCGAGAACAATCTGCGGTGCGCACGCTGT CCTCACGACGGGGATCCGTTCAATCGAGCCCGCACACCATGGGAGGGGGG TGGTTGCGTGCCTGAGCGCGCGTCCCTCTCCTGCAGCCAACGCTGGACAC ATTTGTTCCCGACGCACGGGACAACAGCAATCATGCGGGTCATCGCACCC CTGTGCAATCGTTTTTATTATGTAAATAATGGATTGATTCTGCCTTTTCA CCTCACCCCTGTGCGATGAATCTGATAAGAGCAATGACTGCGATAAGGGC GATCCTGAGTAGATCTCGAATGACGCTGCTGGGTGTACTATGCTCACATT TATGTGCGGTGCCTCCGATGTGTACGCTGCTGAATAAGCACGCACACGGT TCTGCACATAAATGCGGCGAAATCAAATCTGCTGCACCAGGGAAATACGA ACACGTTGTCCCGCCGCATGTGTGGAGAGCGCGGTCGTGTAGTCTCTCAT ATGCGGGGCATACACAGCGAATCTCCTGAAGAAGGCGCGGCAGCACGCAT CCCAGGTCACCCCTGTGGCTTGAATATTTGTTCAGATCCTGCGGCAATCC AATTCCATCATTCCATTTCCGCTTTTCTACGCACACCTGTGCGATGACTC CGACATGTGCGATGAGCCGCATGATTACGGTAGCTGTGCTTAAAGCATAG GGCTAGCCCATCGGGTCTCTCACGGTGCCCTCCAAATCATCCACCCTTGT TAAAGTGGTGAGAAAAACACGAGCCCACCAGCCTTGTTTCTATCCCCCCA CCGCTTGCTCGCCCCCCTCGCGCTCGTCTGTATGTCTCTCCCTCCACATC CCAGAGGTAACCTTCCGGCGATGTTGCTGTGGTCGGCCTACACGGGGGTG CAGTTCGGTGTGTACGAGCATCTCCGGTCTGCAGATTTTTTTGGCTCCCG GCGAAAAAGACCACACGACAGCAGCGGCGGCGGCGGCGGCGGCGGCAGCG GCAGTACCGCCGGTGTAGAACCCTTCTTTGCTGAGGACAGCTCGGGGGCG AGTGGGCGCGAGGGTGACAACAGCAGGGCGAGGGAGGTTGAGGGCAAATG GGTTCGAGGGGTCCGTGGGGAGGGAGGGGTGGAGATGGACACGAAGGGCG AGCGGAATTTGCCGCCGGCGCTGGCAAACTTCGCATATGGCTCGATCGCG GCGTTCATCGCGACCGTCGCGACGTACCCGCTGGACATCACCCGCACGGC GCTCGCGTTTCAGGTGGGTGACGGTGAGGTTGAGGGTGAGGGCTAGAGTG GTGTGGGGCGAGGGCGGGGAGAGTGGCGAGGGTAGGAAGGTCAGCGAGGG TCAAGGGCAGAGAGGTCAGCGCTAGCTGATGGCTGGTGGGGTTGGGGGTG ACAGTGGAGGTTACAAGGGGCACGCTCATACGACTCACGGTATTGGACCC AAGCACGCTGTGCGGCACAACATCAAGCGCCCGCTCTGAAGTTCCCATTA ACGACCTACGGGTGTCAACCGCGAAACACCGCCTTTGCCCCTCCCCCGCC AACACCGATGGCTCTCATCTCGGTGTTTGCCATCGGGATTGGGTTTTCGT CGCGTGGCAACGACGTTGTAAAACAAGCCAATTCACTTCGTGAACTCGGC AACCAGGTTACCGTCTTTTTTTTTCCTCTGGTTTTTTTTGGCGGTAACCA TAATGGTGGTCGAGAAGATCATGTTGTGCGGAGTGGAGAACCCTCACTCC GTGCAAGGGGGATGATCGCACCACGTTGTGTTAAAATGGTCAAGCACCCT CGAGGCAGTTACATAGTGCTTACAACTGTCTCTGGAAGTGAAAGCACCAG AAAATAAATTAACCCATACGCAGCTGTCATCCGTGTGCAAGGAAGTAAGC ACAAGATGCCGAACACCCTTAGCAGGATGCAGCGCACCCTTCATGCGACT CGCCGAAAACCTCACGGCGCTTCGCGCTTGGTGGTGTGAGAGCCTGGTCC GGTGAGAACCCGGCGTGCTCCGTCCCGGCTTTGTAGGGATGCGAGGTCAA TGGTCTAACGACTACGGCATGCACGACTATGAGTACACCCCCCCCCGCCA ACACCTCTCCACCAACTCGGCCCCACCCAAATCACACACGCTGACTCGTC CACAGGGAGTTCCCAAGCGATACGGCAGCATGTCCGAGTTTCTGAGCCGA ACCCTCCGAGAGTCCGGACCCAGGGCCCTCTTCCGGGGCGTCACGCCCAC CCTGGCGATGATCACGCCGCAGATGGGGGTAAGCTTCGCGGTGTGGGAGG CCCTCAGCAGGATGCCACCGCCCGCTATCGTGACGGCGGTGGCGCCCGGT TCGAAGCCCGGCGGGACGACGGTGGCGGCTACCGCGGCGGCAGCGGCGTG GCAGCTGGGCGTGGGTGCTGCCGCGGGCGTGGCGGGGAAGTTGGCGGTGT TTCCCCTCGATACGGTCAAGAAGAGAGTCCAGACGGCGGTGAGGATTGAA GCATCGAATGCAGTGTCGTAG
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Coding sequence (CDS) from alignment at P-fluviatile_contig11:2764129..2769549+

>mRNA_P-fluviatile_contig11.1232.1 ID=mRNA_P-fluviatile_contig11.1232.1|Name=mRNA_P-fluviatile_contig11.1232.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2028bp|location=Sequence derived from alignment at P-fluviatile_contig11:2764129..2769549+ (Porterinema fluviatile SAG_2381)
ATGCGGAACGACGAACACGACGGATTCACAACCGGGCTCAAATCGGAGGC
ACTCAATGTTGCGTTCAATGGCTTCGCCGGGGCGACAGCTGGAGATGCGG
AACGACGAACACGACGGATTCACAACCGGGCTCAAATCGGAGGCACTCAA
TGTTGCGTTCAATGGCTTCGCCGGGGCGACAGCTGGAGCGGTTTCTCGCC
TGCTCACCGCTCCGTTCGACGTCGCGAAGATAAGCGGTTTCTCGCCTGCT
CACCGCTCCGTTCGACGTCGCGAAGATAAGGTTCCAGCTGGACCATGGCG
CGACCCGGCGGTACGACTCGAGCTTGTGGGTGGCGATGCGCAGCATCTAC
GGGGAGGAGGGGCTCATCGCCCTGTGGAGGTTCCAGCTGGACCATGGCGC
GACCCGGCGGTACGACTCGAGCTTGTGGGTGGCGATGCGCAGCATCTACG
GGGAGGAGGGGCTCATCGCCCTGTGGAGAGGTAACCTTCCGGCGATGTTG
CTGTGGTCGGCCTACACGGGGGTGCAGTTCGGTGTGTACGAGCATCTCCG
GTCTGCAGATTTTTTTGGCTCCCGGCGAAAAAGACCACACGACAGCAGCG
GCGGCGGCGGCGGCGGCGGCAGCGGCAGTACCGCCGGTGTAGAACCCTTC
TTTGCTGAGGACAGCTCGGGGGCGAGTGGGCGCGAGGGTGACAACAGCAG
GGCGAGGGAGGTTGAGGGCAAATGGGTTCGAGGGGTCCGTGGGGAGGGAG
GGGTGGAGATGGACACGAAGGGCGAGCGGAATTTGCCGCCGGCGCTGGCA
AACTTCGCATATGGCTCGATCGCGGCGTTCATCGCGACCGTCGCGACGTA
CCCGCTGGACATCACCCGCACGGCGCTCGCGTTTCAGAGGTAACCTTCCG
GCGATGTTGCTGTGGTCGGCCTACACGGGGGTGCAGTTCGGTGTGTACGA
GCATCTCCGGTCTGCAGATTTTTTTGGCTCCCGGCGAAAAAGACCACACG
ACAGCAGCGGCGGCGGCGGCGGCGGCGGCAGCGGCAGTACCGCCGGTGTA
GAACCCTTCTTTGCTGAGGACAGCTCGGGGGCGAGTGGGCGCGAGGGTGA
CAACAGCAGGGCGAGGGAGGTTGAGGGCAAATGGGTTCGAGGGGTCCGTG
GGGAGGGAGGGGTGGAGATGGACACGAAGGGCGAGCGGAATTTGCCGCCG
GCGCTGGCAAACTTCGCATATGGCTCGATCGCGGCGTTCATCGCGACCGT
CGCGACGTACCCGCTGGACATCACCCGCACGGCGCTCGCGTTTCAGGGAG
TTCCCAAGCGATACGGCAGCATGTCCGAGTTTCTGAGCCGAACCCTCCGA
GAGTCCGGACCCAGGGCCCTCTTCCGGGGCGTCACGCCCACCCTGGCGAT
GATCACGCCGCAGATGGGGGTAAGCTTCGCGGTGTGGGAGGCCCTCAGCA
GGATGCCACCGCCCGCTATCGTGACGGCGGTGGCGCCCGGTTCGAAGCCC
GGCGGGACGACGGTGGCGGCTACCGCGGCGGCAGCGGCGTGGCAGCTGGG
CGTGGGTGCTGCCGCGGGCGTGGCGGGGAAGTTGGCGGTGTTTCCCCTCG
ATACGGTCAAGAAGAGAGTCCAGACGGCGGTGAGGATTGAAGCATCGAAT
GCAGTGTCGTAGGGAGTTCCCAAGCGATACGGCAGCATGTCCGAGTTTCT
GAGCCGAACCCTCCGAGAGTCCGGACCCAGGGCCCTCTTCCGGGGCGTCA
CGCCCACCCTGGCGATGATCACGCCGCAGATGGGGGTAAGCTTCGCGGTG
TGGGAGGCCCTCAGCAGGATGCCACCGCCCGCTATCGTGACGGCGGTGGC
GCCCGGTTCGAAGCCCGGCGGGACGACGGTGGCGGCTACCGCGGCGGCAG
CGGCGTGGCAGCTGGGCGTGGGTGCTGCCGCGGGCGTGGCGGGGAAGTTG
GCGGTGTTTCCCCTCGATACGGTCAAGAAGAGAGTCCAGACGGCGGTGAG
GATTGAAGCATCGAATGCAGTGTCGTAG
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