prot_P-fluviatile_contig6.12380.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig6.12380.1
Unique Nameprot_P-fluviatile_contig6.12380.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length306
Homology
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BLAST of mRNA_P-fluviatile_contig6.12380.1 vs. uniprot
Match: D7FHS8_ECTSI (SNF2 helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHS8_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 1.870e-23
Identity = 100/259 (38.61%), Postives = 132/259 (50.97%), Query Frame = 0 
Query:    1 MPRRKPSNP---TRREVTGDGIGGLPGQPSSLDYPAAATG-APSIPTGGDGRAR--------EAGDIDGDDNLREEGGGTWEDGDILAMEEAXXXXXXXXXXXXXXXXXRRKRHKGRHALAAANGKGPRDIGGLIVGSRTLPLQTTGSLKEIQGIRIVIPSPSARASFVRNARTARYAVGNDDENGDXXXXXXXXXXXXXCDAELGGGVLVEFGMGWGGAGDSCGQDIRAETMIRMDPEVFSAAADLDRDGFIAFTATH 247
            MPRRK +NP   +RR VTGDGIGG P  P+    P A  G +PS   G  G A          AG ++G      E GG  E G ++  E+ XXXX              RKR K  H   +A       + G ++GSR L L   GSL+ ++G+RIV+P P  RAS VRNA   R+AVG++DE+                   +  GV+VEF   WG  GD  G+ +R+  M+R+ PE+F A  DLDRDG++A TA  
Sbjct:    1 MPRRKAANPIRTSRRNVTGDGIGGRP--PAPAPGPPADGGLSPSSGVGDGGGAVLPNSSATVVAGGLEGVG--AGELGGVGE-GTVMEDEDXXXXXDRVNPSSSG-----RKRQKIEHREGSAL------VVGDVIGSRHLALYPPGSLRALRGLRIVVPPPPGRASLVRNACVGRFAVGDEDED--------FATEERGSSQRVSTGVIVEFCEDWGVVGDPGGRAVRSGMMLRVTPEIFGAFEDLDRDGYVAITAAR 235
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12380.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHS8_ECTSI1.870e-2338.61SNF2 helicase n=1 Tax=Ectocarpus siliculosus TaxID... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig6contigP-fluviatile_contig6:588967..599334 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig6.12380.1mRNA_P-fluviatile_contig6.12380.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig6 588967..599425 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig6.12380.1 ID=prot_P-fluviatile_contig6.12380.1|Name=mRNA_P-fluviatile_contig6.12380.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=306bp
MPRRKPSNPTRREVTGDGIGGLPGQPSSLDYPAAATGAPSIPTGGDGRAR
EAGDIDGDDNLREEGGGTWEDGDILAMEEAEEEEGEEQERVEPPSAARRK
RHKGRHALAAANGKGPRDIGGLIVGSRTLPLQTTGSLKEIQGIRIVIPSP
SARASFVRNARTARYAVGNDDENGDGDDGGGGGGGGGGCDAELGGGVLVE
FGMGWGGAGDSCGQDIRAETMIRMDPEVFSAAADLDRDGFIAFTATHAAA
PGAAAAAVTLAVDSKSPPPLPTAMEFHVLAKAFHEDGPRPADIAKWQVLV
GWLYPK
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