prot_P-fluviatile_contig11.1236.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig11.1236.1
Unique Nameprot_P-fluviatile_contig11.1236.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length154
Homology
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BLAST of mRNA_P-fluviatile_contig11.1236.1 vs. uniprot
Match: D8LKF7_ECTSI (TFIIS central domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKF7_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 3.860e-21
Identity = 54/77 (70.13%), Postives = 60/77 (77.92%), Query Frame = 0 
Query:    1 MLGAAALPPPPPAPVARPPVPASSAAPGAPVAGGQGVKRPRCLVPGCSNPVGRDVAYCSDDCVVAAQKQAVQALLAY 77
            MLG AALPPPPPAPV +  VPA   APGAP  GG G+KR R L  GC  PVGRDVA+CSDDCVV+AQ+QAV AL+AY
Sbjct:  874 MLGTAALPPPPPAPVVKAAVPAPRVAPGAPAIGGAGLKRTRKLTAGCDKPVGRDVAFCSDDCVVSAQRQAVHALVAY 950
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1236.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKF7_ECTSI3.860e-2170.13TFIIS central domain-containing protein (Fragment)... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig11contigP-fluviatile_contig11:2825602..2826063 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig11.1236.1mRNA_P-fluviatile_contig11.1236.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig11 2825602..2826063 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig11.1236.1 ID=prot_P-fluviatile_contig11.1236.1|Name=mRNA_P-fluviatile_contig11.1236.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=154bp
MLGAAALPPPPPAPVARPPVPASSAAPGAPVAGGQGVKRPRCLVPGCSNP
VGRDVAYCSDDCVVAAQKQAVQALLAYHQKEQQSSAKVAAAGSRAAEAAP
NGDSGGGNAVAVIGGSSGGAAGTSGGGESTAGGEADGMEATPGAAAAKAE
ATKA
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