Homology
BLAST of mRNA_P-fluviatile_contig105.956.1 vs. uniprot
Match: Q8QKW5_ESV1K (EsV-1-15 n=2 Tax=root TaxID=1 RepID=Q8QKW5_ESV1K) HSP 1 Score: 112 bits (279), Expect = 6.720e-31 Identity = 52/74 (70.27%), Postives = 62/74 (83.78%), Query Frame = 1 Query: 1 MIQLPVEAVVVGLVIMLAKYPCGVIALRILPMKGDDHHPVMYLSLFLTGLVVHLALEVLKVNKWYCLHGFSCLK 222
MI+L +EAVVVG+V+MLA YPCG++A ++LPMKGDDH PVMYLSLFLTGL HL EVLK+N WYC GF+C K
Sbjct: 1 MIRLVIEAVVVGVVMMLAGYPCGLLASKLLPMKGDDHRPVMYLSLFLTGLSSHLLFEVLKINLWYCSKGFACSK 74
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Ec32 ortholog description | EsV-1-15 |
| Ec32 ortholog | Ec-06_006580.1 |
| Hectar predicted targeting category | signal peptide |
| Exons | 1 |
| Model size | 225 |
| Cds size | 225 |
| Stop | 1 |
| Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815422.881356-CDS-P-fluviatile_contig105:13375..13600 | 1622815422.881356-CDS-P-fluviatile_contig105:13375..13600 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig105 13376..13600 + |
| 1693561798.8420725-CDS-P-fluviatile_contig105:13375..13600 | 1693561798.8420725-CDS-P-fluviatile_contig105:13375..13600 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig105 13376..13600 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig105.956.1 >prot_P-fluviatile_contig105.956.1 ID=prot_P-fluviatile_contig105.956.1|Name=mRNA_P-fluviatile_contig105.956.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=75bp
MIQLPVEAVVVGLVIMLAKYPCGVIALRILPMKGDDHHPVMYLSLFLTGL
VVHLALEVLKVNKWYCLHGFSCLK* back to topmRNA from alignment at P-fluviatile_contig105:13376..13600+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig105.956.1 ID=mRNA_P-fluviatile_contig105.956.1|Name=mRNA_P-fluviatile_contig105.956.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=225bp|location=Sequence derived from alignment at P-fluviatile_contig105:13376..13600+ (Porterinema fluviatile SAG_2381)
ATGATCCAACTACCAGTCGAAGCCGTCGTTGTTGGCCTGGTGATCATGCT
GGCAAAATACCCCTGTGGTGTTATTGCCCTCCGAATTTTGCCGATGAAGG
GGGACGATCATCATCCGGTCATGTACCTTAGCCTCTTTCTGACGGGGTTG
GTCGTGCACCTTGCGCTTGAGGTGTTGAAGGTAAACAAATGGTACTGTTT
GCACGGATTTTCATGTTTGAAGTAA back to topCoding sequence (CDS) from alignment at P-fluviatile_contig105:13376..13600+ >mRNA_P-fluviatile_contig105.956.1 ID=mRNA_P-fluviatile_contig105.956.1|Name=mRNA_P-fluviatile_contig105.956.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=450bp|location=Sequence derived from alignment at P-fluviatile_contig105:13376..13600+ (Porterinema fluviatile SAG_2381)
ATGATCCAACTACCAGTCGAAGCCGTCGTTGTTGGCCTGGTGATCATGCT
GGCAAAATACCCCTGTGGTGTTATTGCCCTCCGAATTTTGCCGATGAAGG
GGGACGATCATCATCCGGTCATGTACCTTAGCCTCTTTCTGACGGGGTTG
GTCGTGCACCTTGCGCTTGAGGTGTTGAAGGTAAACAAATGGTACTGTTT
GCACGGATTTTCATGTTTGAAGTAAATGATCCAACTACCAGTCGAAGCCG
TCGTTGTTGGCCTGGTGATCATGCTGGCAAAATACCCCTGTGGTGTTATT
GCCCTCCGAATTTTGCCGATGAAGGGGGACGATCATCATCCGGTCATGTA
CCTTAGCCTCTTTCTGACGGGGTTGGTCGTGCACCTTGCGCTTGAGGTGT
TGAAGGTAAACAAATGGTACTGTTTGCACGGATTTTCATGTTTGAAGTAA back to top
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