prot_P-fluviatile_contig10.844.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig10.844.1
Unique Nameprot_P-fluviatile_contig10.844.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length362
Homology
BLAST of mRNA_P-fluviatile_contig10.844.1 vs. uniprot
Match: D7FIH8_ECTSI (Coated vesicle membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH8_ECTSI)

HSP 1 Score: 237 bits (604), Expect = 8.790e-73
Identity = 149/242 (61.57%), Postives = 181/242 (74.79%), Query Frame = 0
Query:  120 QIVGSRAKGTMVIFRRSSDNQLLYRKKDLQEDLFRVDATANGEYELCFINGDNTLMNELGHKDVPKDPSLVGLDALRREKKDKEQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDYDVDYYGRNAGYKTFGFGLRLGKDVEDLESQADVASADMDRANFLKDEADVLVQILSIFNDHESFMRGREQSHRADVEETSKRLMWCTIIEAAVLVWVSWSQLSYIRRFFETKRVL 361
            +++G   K TMVI ++  DN+LLYRK+DL ED FRVDAT +G+YELCFING    +  L +K VP+  S VGL+ALR+EK               XXXXXXXXXXXXXXXXXXXXXXX       D    +Y + +GYKTFGFGLRLGKDVEDL+S ADV+  D   A+FL +EAD+LV+ LS+FNDHES+MRGRE+ HR +V++TS RLMWCT +EAAVLVWVSW+QLSYIRRFFETKR+L
Sbjct:   65 EVLGYPVKNTMVILQKRGDNKLLYRKEDLGEDYFRVDATNDGDYELCFINGGEERIKSLRNKLVPEVNSFVGLNALRQEK---------------XXXXXXXXXXXXXXXXXXXXXXXELLDGLSDDMPSWYAKESGYKTFGFGLRLGKDVEDLQSMADVSVEDKVMASFLAEEADILVETLSVFNDHESYMRGREEYHRENVKQTSSRLMWCTFVEAAVLVWVSWTQLSYIRRFFETKRIL 291          
BLAST of mRNA_P-fluviatile_contig10.844.1 vs. uniprot
Match: A0A7S2DBK6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DBK6_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 3.080e-11
Identity = 41/106 (38.68%), Postives = 61/106 (57.55%), Query Frame = 0
Query:  254 NAGYKTFGFGLRLGKDVEDLESQADVASADMDRANFLKDEADVLVQILSIFNDHESFMRGREQSHRADVEETSKRLMWCTIIEAAVLVWVSWSQLSYIRRFFETKR 359
            N G K    G    +D  DL S  D A A  +    + +    L Q L +  DH+ +MR RE+ HR+ V+ T+ +++W T++EAA+LV +S  Q+ YIR+FFE KR
Sbjct:   97 NQGDKDAPIGFAFREDAADLISDGDSAVATEENIVSMIEVGKDLSQGLDMLLDHQQYMRMREEHHRSAVQGTNSKVLWWTLVEAAILVSMSIWQILYIRKFFEVKR 202          
BLAST of mRNA_P-fluviatile_contig10.844.1 vs. uniprot
Match: A0A836CQY8_9STRA (Transmembrane emp24 domain-containing protein 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQY8_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 3.130e-10
Identity = 33/70 (47.14%), Postives = 50/70 (71.43%), Query Frame = 0
Query:  292 DEADVLVQILSIFNDHESFMRGREQSHRADVEETSKRLMWCTIIEAAVLVWVSWSQLSYIRRFFETKRVL 361
            D ++ LV  L    DH+++MR REQSHR  ++ T++RL+  TI EA +LV ++  Q+SYIR+FFE KR++
Sbjct:    3 DASEELVNDLYTMVDHQTYMRQREQSHRETIDSTNRRLLLWTIAEALLLVSMAMWQVSYIRQFFEVKRMM 72          
BLAST of mRNA_P-fluviatile_contig10.844.1 vs. uniprot
Match: B8C202_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C202_THAPS)

HSP 1 Score: 62.0 bits (149), Expect = 7.930e-7
Identity = 35/101 (34.65%), Postives = 58/101 (57.43%), Query Frame = 0
Query:  261 GFGLRLGKDVEDLESQADVASADMDRANFLKDEADVLVQILSIFNDHESFMRGREQSHRADVEETSKRLMWCTIIEAAVLVWVSWSQLSYIRRFFETKRVL 361
            GF +R+      L+ +A     D    + L + +D L++ L    DH+ +MRGRE  H    + T  R++  T++EA VL+ +S+ Q+ Y+++FFETKR L
Sbjct:  125 GFAIRVLPPQRGLDGEA---GPDDRLTSHLIEMSDKLMEGLHTMADHQEYMRGRENRHSVLADTTFNRIVQWTVLEAVVLILISFGQVLYLKKFFETKRHL 222          
BLAST of mRNA_P-fluviatile_contig10.844.1 vs. uniprot
Match: A0A4P9VYA0_9FUNG (Supernatant protein factor, C-terminal domain-containing protein n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9VYA0_9FUNG)

HSP 1 Score: 54.3 bits (129), Expect = 5.580e-5
Identity = 25/72 (34.72%), Postives = 43/72 (59.72%), Query Frame = 0
Query:  290 LKDEADVLVQILSIFNDHESFMRGREQSHRADVEETSKRLMWCTIIEAAVLVWVSWSQLSYIRRFFETKRVL 361
            L++E   +   +    D ++++  RE  HR   E T+ R+ W ++ E AVL+ V   Q+SY++RFFE KR++
Sbjct:  134 LQEEVRQMADGIRAIRDEQAYLMQREAMHRKTAESTNSRVAWWSLFETAVLIAVCIFQVSYLKRFFEVKRLV 205          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig10.844.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FIH8_ECTSI8.790e-7361.57Coated vesicle membrane protein n=1 Tax=Ectocarpus... [more]
A0A7S2DBK6_9STRA3.080e-1138.68Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A836CQY8_9STRA3.130e-1047.14Transmembrane emp24 domain-containing protein 2 n=... [more]
B8C202_THAPS7.930e-734.65Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A4P9VYA0_9FUNG5.580e-534.72Supernatant protein factor, C-terminal domain-cont... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009038GOLD domainSMARTSM01190EMP24_GP25L_2coord: 16..356
e-value: 1.0E-12
score: 58.2
IPR009038GOLD domainPFAMPF01105EMP24_GP25Lcoord: 129..356
e-value: 1.3E-16
score: 61.1
IPR015720TMP21-relatedPANTHERPTHR22811TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEINcoord: 12..356
NoneNo IPR availablePANTHERPTHR22811:SF31TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 2coord: 12..356
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 352..361
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..327
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 328..351
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.742

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig10contigP-fluviatile_contig10:2890679..2897309 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig10.844.1mRNA_P-fluviatile_contig10.844.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig10 2890151..2897345 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig10.844.1 ID=prot_P-fluviatile_contig10.844.1|Name=mRNA_P-fluviatile_contig10.844.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=362bp
MGAFLAALLTTARVEAMTMDVVDGDDQCVVITASKGNTINANFEQQPSRL
GCSSGKLCILHAWDATGKFCVRRSTNRRDLLSSLVARALSMVGMANHDSA
SSLRPPFSAPRTLDSTRLVQIVGSRAKGTMVIFRRSSDNQLLYRKKDLQE
DLFRVDATANGEYELCFINGDNTLMNELGHKDVPKDPSLVGLDALRREKK
DKEQTPEQKKGGESDSAADQDDDDSTLSDLFLTDEEDDPSGDDDDYDVDY
YGRNAGYKTFGFGLRLGKDVEDLESQADVASADMDRANFLKDEADVLVQI
LSIFNDHESFMRGREQSHRADVEETSKRLMWCTIIEAAVLVWVSWSQLSY
IRRFFETKRVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009038GOLD_dom
IPR015720TMP21-related