prot_P-fluviatile_contig1.486.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig1.486.1
Unique Nameprot_P-fluviatile_contig1.486.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length589
Homology
BLAST of mRNA_P-fluviatile_contig1.486.1 vs. uniprot
Match: D8LNH6_ECTSI (RNA polymerase sigma factor SigD n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNH6_ECTSI)

HSP 1 Score: 546 bits (1408), Expect = 3.160e-183
Identity = 293/427 (68.62%), Postives = 335/427 (78.45%), Query Frame = 0
Query:   96 PETYSRNGRWTVYSSGGRNQPQNGRDPNRVLSKEAQAKREREYQLGTKIQRMVRLQKLKVDMMPPAXXXXXXXXXXXXXXXXXXXGVSNEAWAAAAGESVETLRLALEEGASAKQEMVVSNLSLVDIIVKNYVSTFSYGRFTEGDLKQDATVGLIRAVEKFDPERGFLFSTYGRWWVRKFLHEGVKNHDRLVRIPNSAAYRIAKVKRVRAELEAELGRAPTKPELALEAGLTVQQVEASLEQDSFYIERLDRLLGHGIGLADNIFASNYGESFLYGKDMLGPHPGESLQPTAEGSKVIQVSLRQDLSSAFVRLLDSTETECLVLRYGLHDGVTNSIEEVAEIMDFCDPDDVRIITTQAMAKLRNGCTPEEREKLMSYLSIYKPKSADYSKSMYNPVKSK--------SRRNASSGSGSSSSVGTFGD 514
            P+ Y RNG+WTVYSS GR  P   RDPN+ LSK+AQA+R++EY+LGTKIQRM++L KLK D++ PA                    VS+E WA  A ESVE+LR AL+EG  AKQE+V+ NL+LVDIIVKNYV TF+YGRFTE DL QDATVGLIRAVEKFDPE+GF F+TYGRWWVRK+LHEGV+NH+R+VRIPNSAAYRIAKVKRVR ELE ELGRAPTKPE+ALE  LTVQQVEA LEQDSF IERLD  +GHG G+AD +FAS++GE FLYG DML  HPGE+  PT EG KVIQ SLR DLSSAFVRLLD+TE ECLVLRYGLHDGVTNSIE+ A IMDFCDPDDVRIITTQAMAKLR+GC PEER+KLMSYLS+Y+P +  YSK  Y+P KS+        SR + S    S S VG  GD
Sbjct:   14 PKNYRRNGKWTVYSSSGRGAPLQPRDPNQALSKKAQARRDKEYELGTKIQRMMKLLKLK-DVLQPAAGEDE---------------VSSEVWAEGAMESVESLRQALDEGEKAKQELVLDNLNLVDIIVKNYVGTFAYGRFTEKDLTQDATVGLIRAVEKFDPEKGFFFATYGRWWVRKYLHEGVQNHNRMVRIPNSAAYRIAKVKRVRDELEGELGRAPTKPEIALETDLTVQQVEACLEQDSFRIERLDGYMGHGFGMADTVFASHFGEGFLYGSDML-THPGETPAPTVEGEKVIQSSLRGDLSSAFVRLLDATERECLVLRYGLHDGVTNSIEQTAAIMDFCDPDDVRIITTQAMAKLRDGCLPEERKKLMSYLSVYEPSTPSYSKGKYDPSKSRRNKRLATDSRASTSGAISSGSRVGDGGD 423          
BLAST of mRNA_P-fluviatile_contig1.486.1 vs. uniprot
Match: A0A4P5VE37_9CYAN (RNA polymerase sigma factor n=1 Tax=Cyanobium sp. TaxID=2164130 RepID=A0A4P5VE37_9CYAN)

HSP 1 Score: 131 bits (329), Expect = 2.910e-30
Identity = 99/280 (35.36%), Postives = 145/280 (51.79%), Query Frame = 0
Query:  198 LRLALEEGASAKQEMVVSNLSLVDIIVKNYVSTFSYGRFTEG-DLKQDATVGLIRAVEKFDPERGFLFSTYGRWWVRKFLHEGVKNHDRLVRIPNSAAYRIAKVKRVRAELEAELGRAPTKPELALEAGLTVQQVEASLEQDSFYIERLDRLLGHGIGLADNIFASNYGESFLYGKDMLGPHPGESLQPTAEGSKVIQVSLRQDLSSAFVRLLDSTETECLVLRYGLHDGVTNSIEEVAEIMDFCDPDDVRIITTQAMAKLRNGCTPEEREKLMSYLSIY 476
            LRLAL +G  AK+ M+ +NL LV  + K Y       R  E  DL Q+ T+GL RAVE+FDP RGF FSTY  WW+R+ +   + +  R +R+P     ++ ++KR + EL   LGR+P+  ELALE G++   V   +++    I  LDR +G G             E+ L  +D+L  H      PT E   + +  LR DL  A +  L S E   + LR+GL D    ++ E+ E M     + VR I   A+ KLR    P+ R+++  YL  +
Sbjct:   73 LRLALHQGRRAKERMIQANLRLVVAVAKKYQQ-----RGLELLDLVQEGTLGLERAVERFDPTRGFRFSTYAYWWIRQGITRAIASQSRSIRLPVHITEKLNRLKRAQRELSLRLGRSPSLAELALELGVSEDTVRLIMQRQPQAIS-LDRPVGQGQ------------ETDL--RDLLEDH-----HPTPE-QVLTRAQLRADLM-ALLEELSSREASVIRLRFGLEDDTPRTLTEIGEQMGI-SRERVRQIEASALLKLRQ---PQRRKRMRDYLGSF 321          
BLAST of mRNA_P-fluviatile_contig1.486.1 vs. uniprot
Match: B8C5F0_THAPS (Sigma70_r2 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5F0_THAPS)

HSP 1 Score: 131 bits (329), Expect = 4.590e-30
Identity = 104/335 (31.04%), Postives = 160/335 (47.76%), Query Frame = 0
Query:  137 EYQLGTKIQRMVRLQKLKVDMMPPAXXXXXXXXXXXXXXXXXXXGVSNEAWAAAAGE-SVETLRLALEEGASAKQEMVVSNLSLVDIIVKNYVSTFSYGRFTEGDLKQDATVGLIRAVEKFDPERGFLFSTYGRWWVRKFLHEGVKNHDRLVRIPNSAAYRIAKVKRVRAELEAELGRAPTKPELALEAGLTVQQVEA---SLEQDSFYIERLDRLLGHGIGLADNIFASNYGESFLYGKDMLGPHPGESLQPTAEGSKVIQVSLRQDLSSAFVRLLDSTETECLVLRYGLHD------GVTN--SIEEVAEIMDFCDPDDVRIITTQAMAKLRN 459
            E +LG K Q  +RLQK+  D+                         +++ W AAAG+ ++E L   LEEG  AK ++V SNL +V  +V  Y+       +  GDL QD T+ LIRA EK++PERGF FSTY  +W+R  +        R+V +P        +V +  A L  ELGR PTK EL+    +TV Q++    +++Q +F ++              N +  N   S    KD +       +  T E  K  ++ +++ L S   R L   E + L+LRYGL D      G++   +I EV++++    PD VR I   +  +LR+
Sbjct:   30 EKELGAKTQEAMRLQKMYEDLQSKHGREP-----------------TDDEWCAAAGKINMEALEQVLEEGIEAKNQLVASNLRMVQRVVNLYIRNGLGSEYNAGDLMQDGTMALIRAAEKYEPERGFRFSTYAMYWIRSAVKRSQTMQSRIVNVPQRIHETYKRVTKTEARLRKELGRDPTKVELSAACDITVVQLDRCRRAMQQAAFSLD----------AEVQNTYKPNNSNSR---KDTMYDLVASKVDET-EYEKTQRLLMKEHLISTLRRYLSPHEVDLLLLRYGLMDERALPKGMSGPLTIAEVSKLVGL-KPDKVRRIIINSQKQLRH 332          
BLAST of mRNA_P-fluviatile_contig1.486.1 vs. uniprot
Match: UPI0019F950EB (RNA polymerase sigma factor, RpoD/SigA family n=1 Tax=Oscillatoriales cyanobacterium LEGE 11467 TaxID=1828826 RepID=UPI0019F950EB)

HSP 1 Score: 129 bits (324), Expect = 1.260e-29
Identity = 104/327 (31.80%), Postives = 158/327 (48.32%), Query Frame = 0
Query:  135 EREYQLGTKIQRMVRLQKLKVDMMPPAXXXXXXXXXXXXXXXXXXXGVSNEAWAAAAGESVETLRLALEEGASAKQEMVVSNLSLVDIIVKNYVSTFSYGRFTEGDLKQDATVGLIRAVEKFDPERGFLFSTYGRWWVRKFLHEGVKNHDRLVRIPNSAAYRIAKVKRVRAELEAELGRAPTKPELALEAGLTVQQVEASLEQDSFYIERLDRLLGHGIGLADNIFASNYGESFLYGKDML---GPHPGESLQPTAEGSKVIQVSLRQDLSSAFVRLLDSTETECLVLRYGLHDGVTNSIEEVAEIMDFCDPDDVRIITTQAMAKLR 458
            E E   G ++QR+  L  LK ++M  +                         WA AA  S E L LA+ +G  AK++MV +NL LV  + K Y+           DL Q+ T+G+ R VEKFDP +G+ FSTY  WW+R+ +   +    R +R+P     ++ K+K+V+ +L  ELGRA T  ELA E  LT +Q+         Y+ER  + L   + + DN       ++ L   D+L   GP P +           +Q SLR DL      L  S + E L LR+GL DG + ++ ++ +++     + VR I  +A+ KLR
Sbjct:   27 EEEILFGKQVQRLASLNALKEELMEASDREPTPIE-----------------WADAANISEEELELAIAKGDLAKRKMVEANLRLVVSVAKKYLKR----NVDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKGRTIRLPIHITEKLNKIKKVQRQLTQELGRAATVAELASEMDLTTKQIRE-------YLERARQPLSLDLRVGDNQ------DTEL--ADLLEDEGPSPEDF---------AVQSSLRNDLEMLMADLT-SQQREVLALRFGLKDGQSMTLAKIGDLLQI-SRERVRQIEREALTKLR 306          
BLAST of mRNA_P-fluviatile_contig1.486.1 vs. uniprot
Match: A0A2W4WBA3_9CYAN (RNA polymerase sigma factor, RpoD/SigA family n=1 Tax=Leptolyngbya foveolarum TaxID=47253 RepID=A0A2W4WBA3_9CYAN)

HSP 1 Score: 130 bits (327), Expect = 3.350e-29
Identity = 92/280 (32.86%), Postives = 145/280 (51.79%), Query Frame = 0
Query:  194 SVETLRLALEEGASAKQEMVVSNLSLVDIIVKNYVSTFSYGRFTEGDLKQDATVGLIRAVEKFDPERGFLFSTYGRWWVRKFLHEGVKNHDRLVRIPNSAAYRIAKVKRVRAELEAELGRAPTKPELALEAGLTVQQVEASLEQDSFYIERLDRLLGHGIGLADNIFASNYGESFLYGKDMLGPHPGESLQPTAEGSKVIQVSLRQDLSSAFVRLLDSTETECLVLRYGLHDGVTNSIEEVAEIMDFCDPDDVRIITTQAMAKLRNGCTPEEREKLMSYL 473
            S + L+L L +  +AK+ M+ SNL LV  I K Y++          DL Q+  +GL RA EKFDP++G+ FSTY  WW+R+ +   + N  R +R+P     ++ K+K+   EL  +L R+PT+ E+A    +T +Q+ A L+Q    ++R    L H +G                G+D       E    ++  SK+ +  +RQ++S     +L   E E + LRYGL  G T+++EEV  I      + VR I T+AM KLR    P+   +L ++L
Sbjct:  170 SEQQLKLRLRKARAAKRRMIRSNLRLVVSIAKRYLNR----GVPFLDLIQEGALGLNRAAEKFDPDKGYKFSTYAYWWIRQGITRTIANDARTIRLPIHVVEKLNKLKKASRELRKDLQRSPTENEIAAALDITPEQLRA-LQQ----VQRKSLSLNHRVGK---------------GEDTELMELLEDNNASSPESKISESMMRQEISDVLTEVLSEREKEIIALRYGLTTGETHTLEEVGRIFQL-SRERVRQIQTKAMRKLRR---PQVASRLKNWL 421          
BLAST of mRNA_P-fluviatile_contig1.486.1 vs. uniprot
Match: A0A1Z5JGJ7_FISSO (RNA_pol_sigma70 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JGJ7_FISSO)

HSP 1 Score: 130 bits (327), Expect = 5.480e-29
Identity = 91/299 (30.43%), Postives = 147/299 (49.16%), Query Frame = 0
Query:  187 WAAAAGESVETLRLALEEGASAKQEMVVSNLSLVDIIVKNYVSTFSYGRFTEG---------DLKQDATVGLIRAVEKFDPERGFLFSTYGRWWVRKFLHEGVKNHDRLVRIPNSAAYRIAKVKRVRAELEAELGRAPTKPELALEAGLTVQQVEASLEQDSFYIERLDRLLGHGIGLADNIFASNYGESFLYGKDML--GPHPGESLQPTAEGSKVIQVSLRQDLSSAFVRLLDSTETECLVLRYGLHDGVTNSIEEVAEIMDFCDPDDVRIITTQAMAKLRNGCTPEEREKLMSYLS 474
            WA A G SVE LR  LEEG SA++ +V +N+ LV  I K + +         G         D+ Q+ T+GL+ AVE++ PE+GF FSTY  WWV++ +   + +  R +R+P      + K+++ + E + + GR PT PELA         ++  L++   Y E    +L     L    F     +S   G  +   GP P E ++            LR+D+ +     L ++E E ++ RYGL DG   ++ E A+ +     D VR++  +A+ KLR+   P+   KL  Y++
Sbjct:  151 WAEACGVSVENLRKLLEEGQSAREAVVAANIGLVTSIAKRHYAALKSSTAESGGVGTILTIQDMVQEGTLGLMEAVERYKPEKGFRFSTYATWWVKQRILRSILDSSRTIRLPAHVHAMLQKMRKAKMEFKEQTGREPTTPELA-------HHLDVPLKKIQLYAESSRNVLSLEKPLKTTSFKE---DSRTLGDTLASEGPTPEEDVEADY---------LRRDIRAVMETSLAASEREVIINRYGLDDGNPRTVAETADSLGLT-VDRVRLVEARALNKLRH---PQRSYKLKEYIN 426          
BLAST of mRNA_P-fluviatile_contig1.486.1 vs. uniprot
Match: UPI0019E11358 (RpoD/SigA family RNA polymerase sigma factor n=1 Tax=Leptolyngbyaceae cyanobacterium T60_A2020_046 TaxID=2747813 RepID=UPI0019E11358)

HSP 1 Score: 129 bits (323), Expect = 6.970e-29
Identity = 96/286 (33.57%), Postives = 145/286 (50.70%), Query Frame = 0
Query:  188 AAAAGESVETLRLALEEGASAKQEMVVSNLSLVDIIVKNYVSTFSYGRFTEGDLKQDATVGLIRAVEKFDPERGFLFSTYGRWWVRKFLHEGVKNHDRLVRIPNSAAYRIAKVKRVRAELEAELGRAPTKPELALEAGLTVQQVEASLEQDSFYIERLDRLLGHGIGLADNIFASNYGESFLYGKDMLGPHPGESLQPTAEGSKVIQVSLRQDLSSAFVRLLDSTETECLVLRYGLHDGVTNSIEEVAEIMDFCDPDDVRIITTQAMAKLRNGCTPEEREKLMSYL 473
            AA  G S   LR  L +G +AK+ M+ SNL LV  I K Y++          DL Q+  +GL RA EKFDP++G+ FSTY  WW+R+ +   + N  R +R+P     ++ K+K+   EL  EL R PT+ ELA    +T  Q+  SL+Q    + R    L H +G  ++       E             G +  P    SK+ +  +RQ+++S    +L   E + + LRYGL  G T+++EEV  + +    + VR I T+AM KLR    P+   +L  +L
Sbjct:  133 AAELGLSDAQLRQKLHQGRAAKRRMIRSNLRLVVSIAKRYLNR----GVPFLDLIQEGALGLNRATEKFDPDKGYKFSTYAYWWIRQGITRTIANDARTIRLPIHIVEKLNKLKKAHRELRRELQRNPTEAELAESLDMTADQLR-SLQQ----VRRRSLSLNHRVGKGEDTELMELLED------------GNTQSPE---SKISESMMRQEITSVLAEVLTEREKDIITLRYGLATGETHTLEEVGGMFNL-SRERVRQIQTKAMRKLRR---PQVAARLRGWL 390          
BLAST of mRNA_P-fluviatile_contig1.486.1 vs. uniprot
Match: A0A1Z3HU38_9CYAN (RNA polymerase sigma factor, RpoD/SigA family n=1 Tax=Halomicronema hongdechloris C2206 TaxID=1641165 RepID=A0A1Z3HU38_9CYAN)

HSP 1 Score: 128 bits (322), Expect = 9.500e-29
Identity = 94/282 (33.33%), Postives = 145/282 (51.42%), Query Frame = 0
Query:  192 GESVETLRLALEEGASAKQEMVVSNLSLVDIIVKNYVSTFSYGRFTEGDLKQDATVGLIRAVEKFDPERGFLFSTYGRWWVRKFLHEGVKNHDRLVRIPNSAAYRIAKVKRVRAELEAELGRAPTKPELALEAGLTVQQVEASLEQDSFYIERLDRLLGHGIGLADNIFASNYGESFLYGKDMLGPHPGESLQPTAEGSKVIQVSLRQDLSSAFVRLLDSTETECLVLRYGLHDGVTNSIEEVAEIMDFCDPDDVRIITTQAMAKLRNGCTPEEREKLMSYL 473
            G S   L+  L +G +AK+ M+ SNL LV  I K Y++          DL Q+  +GL RA EKFDP++G+ FSTY  WW+R+ +   + N  R +R+P     ++ K+K+   +L  +L R PT+ ELA    +TV+Q+  SL+Q    + R    L H +G  ++       E             G +  P    SK+ +  +RQ++SS    +L   E + + LRYGL  G T+++EEV  I +    + VR I T+AM KLR    P+   +L  +L
Sbjct:  137 GLSPAQLKQKLHQGRAAKRRMIRSNLRLVVSIAKRYLNR----GVPFLDLIQEGALGLNRATEKFDPDKGYKFSTYAYWWIRQGITRTIANDARTIRLPIHIVEKLNKLKKAHRDLRRDLQRNPTEAELAEVLDMTVEQLR-SLQQ----VRRRSLSLNHRVGKGEDTELLELLED------------GNTQSPE---SKISESMMRQEISSVLAEVLTEREKDIITLRYGLTTGETHTLEEVGGIFNL-SRERVRQIQTKAMRKLRR---PQVAARLRGWL 390          
BLAST of mRNA_P-fluviatile_contig1.486.1 vs. uniprot
Match: UPI001F559531 (RpoD/SigA family RNA polymerase sigma factor n=2 Tax=Pseudanabaena sp. FACHB-2040 TaxID=2692859 RepID=UPI001F559531)

HSP 1 Score: 128 bits (321), Expect = 1.290e-28
Identity = 92/272 (33.82%), Postives = 139/272 (51.10%), Query Frame = 0
Query:  202 LEEGASAKQEMVVSNLSLVDIIVKNYVSTFSYGRFTEGDLKQDATVGLIRAVEKFDPERGFLFSTYGRWWVRKFLHEGVKNHDRLVRIPNSAAYRIAKVKRVRAELEAELGRAPTKPELALEAGLTVQQVEASLEQDSFYIERLDRLLGHGIGLADNIFASNYGESFLYGKDMLGPHPGESLQPTAEGSKVIQVSLRQDLSSAFVRLLDSTETECLVLRYGLHDGVTNSIEEVAEIMDFCDPDDVRIITTQAMAKLRNGCTPEEREKLMSYL 473
            L +G SAK+ M+ SNL LV  I K Y++          DL Q+  +GL RA EKFDP++G+ FSTY  WW+R+ +   + N  R +R+P     ++ K+K+   +L  EL R PT+ ELA    +TV Q+  SL+Q    + R    L H +G                G+D       E     +  SK+ +  +RQ++SS    +L   E + + LRYGL  G T+++EEV  + +    + VR I T+AM KLR    P+   +L  +L
Sbjct:  147 LHQGRSAKRRMIRSNLRLVVSIAKRYLNR----GVPFLDLIQEGALGLNRATEKFDPDKGYKFSTYAYWWIRQGITRTIANDARTIRLPIHIVEKLNKLKKAHRDLRRELHRNPTEHELAAALDVTVDQLR-SLQQ----VRRRSLSLNHRVGK---------------GEDTELMELLEDSNTQSPESKISETMMRQEISSVLAEVLTEREKDIITLRYGLATGETHTLEEVGGMFNL-SRERVRQIQTKAMRKLRR---PQVAARLKGWL 390          
BLAST of mRNA_P-fluviatile_contig1.486.1 vs. uniprot
Match: UPI0003460C22 (RNA polymerase sigma factor RpoD n=1 Tax=Oscillatoria sp. PCC 10802 TaxID=1173028 RepID=UPI0003460C22)

HSP 1 Score: 128 bits (321), Expect = 1.380e-28
Identity = 99/282 (35.11%), Postives = 140/282 (49.65%), Query Frame = 0
Query:  187 WAAAAGESVETLRLALEEGASAKQEMVVSNLSLVDIIVKNYVSTFSYGRFTEGDLKQDATVGLIRAVEKFDPERGFLFSTYGRWWVRKFLHEGVKNHDRLVRIPNSAAYRIAKVKRVRAELEAELGRAPTKPELALEAGLTVQ---------QVEASLEQDSFYIERLDRLLGHGIGLADNIFASNYGESFLYGKDMLGPHPGESLQPTAEGSKVIQVSLRQDLSSAFVRLLDSTETECLVLRYGLHDGVTNSIEEVAEIMDF-CDPDDVRIITTQAMAKLR 458
            WA A G  +   R  L++G  AK +MV SNL LV  I + Y+    Y   +  DL Q+ ++GLIRA EKFD E+G+ FSTY  WW+R+ +  G+ N  R +R+P      I ++K+    L  E+GR PT+ E+A    ++++         Q+  SLE   +  E  D  L + + L D I                     ES + T E   V +  LR+DL SA +  L   E   L  RYGL DG   S+EE+ EI +  CD   VR I  +A+ KLR
Sbjct:  130 WADAVGMPLPAFRQRLQQGRQAKDKMVQSNLRLVVSIARKYI----YRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRGIANRSRTIRLPVRLYETIFRIKKTTKLLSQEMGRKPTEDEIADRMEMSIKKLRFITKSAQLPISLETPIWLEEEKDSGLKYFVRLGDFI---------------------ESDEETPEEC-VTKNLLREDLESA-LNTLRPRERNVLSRRYGLDDGRMKSLEEIGEIFNITCDI--VRQIEIEALRKLR 382          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.486.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNH6_ECTSI3.160e-18368.62RNA polymerase sigma factor SigD n=2 Tax=Ectocarpu... [more]
A0A4P5VE37_9CYAN2.910e-3035.36RNA polymerase sigma factor n=1 Tax=Cyanobium sp. ... [more]
B8C5F0_THAPS4.590e-3031.04Sigma70_r2 domain-containing protein n=1 Tax=Thala... [more]
UPI0019F950EB1.260e-2931.80RNA polymerase sigma factor, RpoD/SigA family n=1 ... [more]
A0A2W4WBA3_9CYAN3.350e-2932.86RNA polymerase sigma factor, RpoD/SigA family n=1 ... [more]
A0A1Z5JGJ7_FISSO5.480e-2930.43RNA_pol_sigma70 domain-containing protein n=2 Tax=... [more]
UPI0019E113586.970e-2933.57RpoD/SigA family RNA polymerase sigma factor n=1 T... [more]
A0A1Z3HU38_9CYAN9.500e-2933.33RNA polymerase sigma factor, RpoD/SigA family n=1 ... [more]
UPI001F5595311.290e-2833.82RpoD/SigA family RNA polymerase sigma factor n=2 T... [more]
UPI0003460C221.380e-2835.11RNA polymerase sigma factor RpoD n=1 Tax=Oscillato... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000943RNA polymerase sigma-70PRINTSPR00046SIGMA70FCTcoord: 409..421
score: 32.46
coord: 240..253
score: 51.47
coord: 264..272
score: 60.79
coord: 446..457
score: 41.34
IPR007627RNA polymerase sigma-70 region 2PFAMPF04542Sigma70_r2coord: 240..274
e-value: 2.9E-7
score: 30.2
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 391..479
e-value: 3.8E-6
score: 28.5
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 287..337
e-value: 2.5E-10
score: 42.2
NoneNo IPR availableGENE3D1.10.601.10coord: 184..286
e-value: 1.5E-21
score: 79.3
NoneNo IPR availablePANTHERPTHR30603RNA POLYMERASE SIGMA FACTOR RPOcoord: 183..473
NoneNo IPR availablePANTHERPTHR30603:SF45RNA POLYMERASE SIGMA FACTOR SIGBcoord: 183..473
IPR014284RNA polymerase sigma-70 like domainTIGRFAMTIGR02937TIGR02937coord: 211..459
e-value: 3.0E-12
score: 44.4
IPR007624RNA polymerase sigma-70 region 3PFAMPF04539Sigma70_r3coord: 297..337
e-value: 2.6E-7
score: 30.6
IPR013324RNA polymerase sigma factor, region 3/4-likeSUPERFAMILY88659Sigma3 and sigma4 domains of RNA polymerase sigma factorscoord: 396..460
IPR013324RNA polymerase sigma factor, region 3/4-likeSUPERFAMILY88659Sigma3 and sigma4 domains of RNA polymerase sigma factorscoord: 284..335
IPR013325RNA polymerase sigma factor, region 2SUPERFAMILY88946Sigma2 domain of RNA polymerase sigma factorscoord: 133..285

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:5386777..5393652 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.486.1mRNA_P-fluviatile_contig1.486.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig1 5384178..5393697 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig1.486.1 ID=prot_P-fluviatile_contig1.486.1|Name=mRNA_P-fluviatile_contig1.486.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=589bp
MGRRPTTTLVQQRQMLRAWLILSIPAMRCAYLGGCRGVDSFAVPGRLRQQ
QGLLDSRRACSRGGIQRVKRRRARCLAMDAEGGAGGGTAEVTVPLPETYS
RNGRWTVYSSGGRNQPQNGRDPNRVLSKEAQAKREREYQLGTKIQRMVRL
QKLKVDMMPPAAAGRPAGATTTGGGGGGSSGVSNEAWAAAAGESVETLRL
ALEEGASAKQEMVVSNLSLVDIIVKNYVSTFSYGRFTEGDLKQDATVGLI
RAVEKFDPERGFLFSTYGRWWVRKFLHEGVKNHDRLVRIPNSAAYRIAKV
KRVRAELEAELGRAPTKPELALEAGLTVQQVEASLEQDSFYIERLDRLLG
HGIGLADNIFASNYGESFLYGKDMLGPHPGESLQPTAEGSKVIQVSLRQD
LSSAFVRLLDSTETECLVLRYGLHDGVTNSIEEVAEIMDFCDPDDVRIIT
TQAMAKLRNGCTPEEREKLMSYLSIYKPKSADYSKSMYNPVKSKSRRNAS
SGSGSSSSVGTFGDVTHDMGGGARETTSANAAAAAAAAGRDSRGQERRGV
WEATTEAQVAGGRRPYNGFESRSATAAEVEGRRQRRRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000943RNA_pol_sigma70
IPR007627RNA_pol_sigma70_r2
IPR036388WH-like_DNA-bd_sf
IPR014284RNA_pol_sigma-70_dom
IPR007624RNA_pol_sigma70_r3
IPR013324RNA_pol_sigma_r3/r4-like
IPR013325RNA_pol_sigma_r2