prot_P-lacustris_contig105.479.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-lacustris_contig105.479.1
Unique Name	prot_P-lacustris_contig105.479.1
Type	polypeptide
Organism	Pleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length	190

Homology

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BLAST of mRNA_P-lacustris_contig105.479.1 vs. uniprot
Match: A0A6H5KXY4_9PHAE (YjgF_endoribonc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXY4_9PHAE)

HSP 1 Score: 327 bits (838), Expect = 1.610e-112
Identity = 167/189 (88.36%), Postives = 176/189 (93.12%), Query Frame = 0

Query:    1 MFRRASSLVGRAVVRPRAIHTEAKLRDLGIELPTPRPPLGNFVMTVRTGNLLYTSGHLPISLEGEMTTGKVGQEVSEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCVDGFKGQPKVVNGASDLFAEVFGKRGVHSRSAVGTNALPMNVPVEIEAIVEFDNSGKKGKKGDDDWTVVKRP 189
            M RR SSLVGRA VRPR +HTEAKL++LGIELPTP+ PLGNFVMTVRTGNLLYTSGHLP SLEGE TTGKVGQE++EEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNC DGF GQPKVVNGASDLFAEVFG+RGVHSRSAVGTNALPMNVPVEIEAIVEFD+ GKKG   DDDWTV+KRP
Sbjct:    1 MLRRVSSLVGRAAVRPRRVHTEAKLKELGIELPTPKAPLGNFVMTVRTGNLLYTSGHLPTSLEGETTTGKVGQELNEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGFAGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFDDGGKKG---DDDWTVLKRP 186

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BLAST of mRNA_P-lacustris_contig105.479.1 vs. uniprot
Match: A0A4D9CNR9_9STRA (YjgF_endoribonc domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CNR9_9STRA)

HSP 1 Score: 213 bits (541), Expect = 2.440e-67
Identity = 101/153 (66.01%), Postives = 127/153 (83.01%), Query Frame = 0

Query:   19 IHTEAKLRDLGIELPTPRPPLGNFVMTVRTGNLLYTSGHLPISLEGEMTTGKVGQEVSEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCVDGFKGQPKVVNGASDLFAEVFGKRGVHSRSAVGTNALPMNVPVEIEAIVEFDN 171
            IHTEAKL ++G++LP+P  P GNF M V++G ++Y SGHLP    G++ TGKVG EVS EEAQ AA+ +A+ L++S+KK++GDLDRV RIVKLVGFVNCVDGF  QP VVNGASD F +VFG +GVH+RSAVGTNALP+N+PVEIEAIVE ++
Sbjct:   32 IHTEAKLTEMGLKLPSPGVPKGNFAMAVKSGKMIYLSGHLPTDANGQLLTGKVGAEVSPEEAQGAAKLIALNLLSSLKKEVGDLDRVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVED 184

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BLAST of mRNA_P-lacustris_contig105.479.1 vs. uniprot
Match: W7TB75_9STRA (Endoribonuclease l-psp n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TB75_9STRA)

HSP 1 Score: 212 bits (539), Expect = 2.540e-66
Identity = 101/153 (66.01%), Postives = 126/153 (82.35%), Query Frame = 0

Query:   19 IHTEAKLRDLGIELPTPRPPLGNFVMTVRTGNLLYTSGHLPISLEGEMTTGKVGQEVSEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCVDGFKGQPKVVNGASDLFAEVFGKRGVHSRSAVGTNALPMNVPVEIEAIVEFDN 171
            IHTEAKL ++G++LP P  P GNF M V++G ++Y SGHLP    G++ TGKVG EVS EEAQ AA+ +A+ L++S+KK++GDLDRV RIVKLVGFVNCVDGF  QP VVNGASD F +VFG +GVH+RSAVGTNALP+N+PVEIEAIVE ++
Sbjct:   83 IHTEAKLTEMGLKLPPPGVPKGNFAMAVKSGKMIYLSGHLPTDANGQLLTGKVGAEVSPEEAQGAAKLIALNLLSSLKKEVGDLDRVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVED 235

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BLAST of mRNA_P-lacustris_contig105.479.1 vs. uniprot
Match: A0A5A8CF06_CAFRO (YjgF_endoribonc domain-containing protein n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8CF06_CAFRO)

HSP 1 Score: 202 bits (513), Expect = 3.720e-63
Identity = 94/167 (56.29%), Postives = 127/167 (76.05%), Query Frame = 0

Query:    4 RASSLVGRAVVRPRAIHTEAKLRDLGIELPTPRPPLGNFVMTVRTGNLLYTSGHLPISLEGEMTTGKVGQEVSEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCVDGFKGQPKVVNGASDLFAEVFGKRGVHSRSAVGTNALPMNVPVEIEAIVEFD 170
            RA+S      +  R +HTEAK+ ++G++LPTP  P  N++M  R GNLL+T+GHLP+  +G++  GKVG++ + EEA  AAR+ A+ ++ ++K ++GDLD+V R+VKL GFVNCVD F  QPKV+NGASD   EV G+RGVH RSAVGTNALPMNVPVE+EAI+E D
Sbjct:   12 RATSAPAVRALAARGVHTEAKIEEMGLKLPTPPTPAANYIMCHRVGNLLFTAGHLPMQEDGQLFNGKVGKDFTTEEAYTAARQCALAILGTVKAEIGDLDKVKRVVKLTGFVNCVDAFSAQPKVLNGASDFMGEVLGERGVHVRSAVGTNALPMNVPVEVEAIIEID 178

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BLAST of mRNA_P-lacustris_contig105.479.1 vs. uniprot
Match: A0A4D9CNR0_9STRA (YjgF_endoribonc domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CNR0_9STRA)

HSP 1 Score: 197 bits (501), Expect = 1.100e-61
Identity = 96/153 (62.75%), Postives = 121/153 (79.08%), Query Frame = 0

Query:   19 IHTEAKLRDLGIELPTPRPPLGNFVMTVRTGNLLYTSGHLPISLEGEMTTGKVGQEVSEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCVDGFKGQPKVVNGASDLFAEVFGKRGVHSRSAVGTNALPMNVPVEIEAIVEFDN 171
            +  EA+L  LGI+LP    P GN+ + VRTGNLL+ +GH+P+   G + TGKVG + S EE QEAA+ +AI L+A++K +LGDLD+V RIVKLVGFVNCVDGF  QP VVNGASD F +VFG +GVH+RSAVGTNALP+N+PVEIEAIVE ++
Sbjct:    2 VQIEARLAQLGIDLPDVIAPKGNYALAVRTGNLLFLAGHIPLLKSGVLMTGKVGADKSLEEGQEAAQVIAINLLATLKSELGDLDKVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVED 154

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BLAST of mRNA_P-lacustris_contig105.479.1 vs. uniprot
Match: A0A835Z1E3_9STRA (Putative translation initiation inhibitor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1E3_9STRA)

HSP 1 Score: 196 bits (497), Expect = 8.800e-61
Identity = 92/153 (60.13%), Postives = 121/153 (79.08%), Query Frame = 0

Query:   17 RAIHTEAKLRDLGIELPTPRPPLGNFVMTVRTGNLLYTSGHLPISLEGEMTTGKVGQEVSEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCVDGFKGQPKVVNGASDLFAEVFGKRGVHSRSAVGTNALPMNVPVEIEAIVEF 169
            R +  EA+L   GI+L  P PP GN+V  VR+GN L+ +GH+P+  +  +  GKVG++V+ E+A   AR+VAI +++++K +LGDLDRVTRIVKLVGFVNC D F GQP V+NGASDLF EVFGK+GVH+RSAVGTNALP+ +PVEIEA++EF
Sbjct:   19 RGVQIEARLAQRGIQLSDPVPPKGNYVPAVRSGNTLFLAGHIPLMPDNNLAKGKVGKDVTPEQANAIARQVAINILSTLKVELGDLDRVTRIVKLVGFVNCTDDFTGQPGVINGASDLFVEVFGKKGVHARSAVGTNALPLGIPVEIEAVIEF 171

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BLAST of mRNA_P-lacustris_contig105.479.1 vs. uniprot
Match: A0A485KSR4_9STRA (Aste57867_10922 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KSR4_9STRA)

HSP 1 Score: 193 bits (491), Expect = 6.510e-60
Identity = 94/171 (54.97%), Postives = 126/171 (73.68%), Query Frame = 0

Query:    1 MFRRASSLVGRAVVRPRAIHTEAKLRDLGIELPTPRPPLGNFVMTVRTGNLLYTSGHLPISLEGEMTTGKVGQEVSEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCVDGFKGQPKVVNGASDLFAEVFGKRGVHSRSAVGTNALPMNVPVEIEAIVEFDN 171
            MFR A +    A    R +HTE ++++LG  LP    P GN+   VR+GNLL+T+GHLP    GE+  GKVG++++ E+  EAAR VA+ + A++K++LGDLDRV RIVK+VGFVNCVDGF  QP V+NG SD   E+FG+RGVH+RSAVGTNALP+ +PVE+E IVE ++
Sbjct:    1 MFRSAVAAFKPAAAAVRRVHTENRIKELGYTLPAVATPKGNYRNVVRSGNLLFTAGHLPQPAGGELIKGKVGEDLTAEQGYEAARHVALAVCATLKQELGDLDRVKRIVKVVGFVNCVDGFTAQPSVINGFSDTVGEIFGERGVHARSAVGTNALPLGIPVEVECIVEVED 171

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BLAST of mRNA_P-lacustris_contig105.479.1 vs. uniprot
Match: A0A6S9K1N5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9K1N5_HETAK)

HSP 1 Score: 192 bits (489), Expect = 1.540e-59
Identity = 93/174 (53.45%), Postives = 130/174 (74.71%), Query Frame = 0

Query:    1 MFRRASSLVGRAVV---RPRAIHTEAKLRDLGIELPTPRPPLGNFVMTVRTGNLLYTSGHLPISLEGEMTTGKVGQEVSEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCVDGFKGQPKVVNGASDLFAEVFGKRGVHSRSAVGTNALPMNVPVEIEAIVEFDN 171
            + RRA+ ++ ++ V     R IH E ++ +LG +LP  +PP GNFV+  R GNLLYT+GHLP   +G++  GKVG++V  + A +AA+ V + ++A++K ++GDLDRV  +VKL+GFVNC DGF+ QP+VVNG SDL  E+FG +G HSRSAVGTNALP+NVPVEIEAI E ++
Sbjct:    4 LLRRANGVIPKSSVLVNAARQIHIEQRIEELGYKLPEMKPPAGNFVLVKRIGNLLYTAGHLPQPADGDLMLGKVGEDVDMDTAYKAAQCVGLNILATVKAEVGDLDRVRNVVKLMGFVNCPDGFRAQPQVVNGCSDLMVEIFGDKGRHSRSAVGTNALPLNVPVEIEAIFEVED 177

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BLAST of mRNA_P-lacustris_contig105.479.1 vs. uniprot
Match: A0A812PJA3_9DINO (TCP17 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812PJA3_9DINO)

HSP 1 Score: 192 bits (489), Expect = 2.410e-59
Identity = 95/161 (59.01%), Postives = 126/161 (78.26%), Query Frame = 0

Query:   11 RAVVRPRA--IHTEAKLRDLGIELPTPRPPLGNFVMTVRTGNLLYTSGHLPISLEGEMTTGKVGQEVSEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCVDGFKGQPKVVNGASDLFAEVFGKRGVHSRSAVGTNALPMNVPVEIEAIVEF 169
            RAV R  A  +HTEAKL +LG+ELP P     N++++VR+G+ ++T+GHLP+  +G + +GKVG +++ EEA  AA  V + +++++K +LGDLDRV RIVKL GFVNCVD F  QPKV+NG SDLF +VFG RGVH+RSA+GTNALP+NVPVEIEAIVE 
Sbjct:   19 RAVARLGACGVHTEAKLEELGLELPPPGKAQANYILSVRSGDTIFTAGHLPMMHDGTLMSGKVGVDLNTEEAYAAAELVGLNILSTLKAELGDLDRVKRIVKLNGFVNCVDSFSAQPKVINGISDLFGKVFGARGVHARSALGTNALPLNVPVEIEAIVEL 179

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BLAST of mRNA_P-lacustris_contig105.479.1 vs. uniprot
Match: A0A2R5GI79_9STRA (Protein TCP17 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GI79_9STRA)

HSP 1 Score: 192 bits (488), Expect = 2.640e-59
Identity = 92/158 (58.23%), Postives = 123/158 (77.85%), Query Frame = 0

Query:   12 AVVRPRAIHTEAKLRDLGIELPTPRPPLGNFVMTVRTGNLLYTSGHLPISLEGEMTTGKVGQEVSEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCVDGFKGQPKVVNGASDLFAEVFGKRGVHSRSAVGTNALPMNVPVEIEAIVEF 169
            A V  R +HTEAKL  LG  LP    P G++ + VR+GN ++T+GHLP    G++  GKVG ++S EEA +AA+  A+ ++A++K +LGDLDRV R+VK+VGFVNC DGF  QP+V+NGASDLFAEV G+RG+H+RSAVGTN+LP+N+PVE+EAIVE 
Sbjct:   24 APVLMRGVHTEAKLEKLGYTLPQVASPKGSYQLCVRSGNQMFTAGHLPQPANGDLLVGKVGVDLSVEEANKAAQYCALSILATLKAELGDLDRVARVVKVVGFVNCADGFAQQPQVINGASDLFAEVLGERGLHARSAVGTNSLPLNIPVEVEAIVEI 181

The following BLAST results are available for this feature:

BLAST of mRNA_P-lacustris_contig105.479.1 vs. uniprot

BLAST of mRNA_P-lacustris_contig105.479.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KXY4_9PHAE	1.610e-112	88.36	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A4D9CNR9_9STRA	2.440e-67	66.01	YjgF_endoribonc domain-containing protein n=1 Tax=...	[more]
W7TB75_9STRA	2.540e-66	66.01	Endoribonuclease l-psp n=2 Tax=Nannochloropsis gad...	[more]
A0A5A8CF06_CAFRO	3.720e-63	56.29	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A4D9CNR0_9STRA	1.100e-61	62.75	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A835Z1E3_9STRA	8.800e-61	60.13	Putative translation initiation inhibitor n=1 Tax=...	[more]
A0A485KSR4_9STRA	6.510e-60	54.97	Aste57867_10922 protein n=1 Tax=Aphanomyces stella...	[more]
A0A6S9K1N5_HETAK	1.540e-59	53.45	Hypothetical protein n=2 Tax=Heterosigma akashiwo ...	[more]
A0A812PJA3_9DINO	2.410e-59	59.01	TCP17 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2...	[more]
A0A2R5GI79_9STRA	2.640e-59	58.23	Protein TCP17 n=1 Tax=Hondaea fermentalgiana TaxID...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035959	RutC-like superfamily	GENE3D	3.30.1330.40		coord: 18..169 e-value: 5.1E-61 score: 206.5
IPR035959	RutC-like superfamily	SUPERFAMILY	55298	YjgF-like	coord: 20..168
IPR013813	Endoribonuclease L-PSP/chorismate mutase-like	PFAM	PF14588	YjgF_endoribonc	coord: 22..164 e-value: 2.0E-28 score: 99.4
None	No IPR available	PANTHER	PTHR43760	FAMILY NOT NAMED	coord: 21..170

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-lacustris_contig105	contig	P-lacustris_contig105:226495..229207 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_93	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-lacustris_contig105.479.1	mRNA_P-lacustris_contig105.479.1	Pleurocladia lacustris SAG_25_93	mRNA	P-lacustris_contig105 226495..229207 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-lacustris_contig105.479.1 ID=prot_P-lacustris_contig105.479.1|Name=mRNA_P-lacustris_contig105.479.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=190bp
MFRRASSLVGRAVVRPRAIHTEAKLRDLGIELPTPRPPLGNFVMTVRTGN
LLYTSGHLPISLEGEMTTGKVGQEVSEEEAQEAARKVAIQLIASIKKDLG
DLDRVTRIVKLVGFVNCVDGFKGQPKVVNGASDLFAEVFGKRGVHSRSAV
GTNALPMNVPVEIEAIVEFDNSGKKGKKGDDDWTVVKRP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR035959	RutC-like_sf
IPR013813	Endoribo_LPSP/chorism_mut-like