prot_P-lacustris_contig1025.317.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1025.317.1
Unique Nameprot_P-lacustris_contig1025.317.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length77
Homology
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BLAST of mRNA_P-lacustris_contig1025.317.1 vs. uniprot
Match: A0A6H5KJG0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJG0_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 1.190e-36
Identity = 65/77 (84.42%), Postives = 68/77 (88.31%), Query Frame = 0 
Query:    1 MGTPFRVFGGTPLGIYAVGPRRRVGLIVRALPRVGVLVVVYRRPHLPQQVVGEVEKFVDNFWAGVQDFGLR--LPPP 75
            MG PFRVFGGTPLGIYAVGP RRVGL+VRALPRVG LVVVYRRPHLPQQVVGEVEKFVD+FWAG Q   +R  LPPP
Sbjct:  209 MGVPFRVFGGTPLGIYAVGPGRRVGLVVRALPRVGFLVVVYRRPHLPQQVVGEVEKFVDDFWAGTQGRAVRSPLPPP 285
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1025.317.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KJG0_9PHAE1.190e-3684.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1025contigP-lacustris_contig1025:21827..22297 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1025.317.1mRNA_P-lacustris_contig1025.317.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1025 20454..23114 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1025.317.1 ID=prot_P-lacustris_contig1025.317.1|Name=mRNA_P-lacustris_contig1025.317.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=77bp
MGTPFRVFGGTPLGIYAVGPRRRVGLIVRALPRVGVLVVVYRRPHLPQQV
VGEVEKFVDNFWAGVQDFGLRLPPPS*
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