prot_P-lacustris_contig960.15962.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig960.15962.1
Unique Nameprot_P-lacustris_contig960.15962.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length144
Homology
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BLAST of mRNA_P-lacustris_contig960.15962.1 vs. uniprot
Match: D7G1W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1W5_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 3.030e-42
Identity = 86/148 (58.11%), Postives = 98/148 (66.22%), Query Frame = 0 
Query:    1 MSCKKQDCVRRLAEELEALQDNAAEFGSQKTGLTGSWKLIYSSAACEGKSGSKG-DRLTSIEDISYVSENYRLSHT-DKDDLRVYKRVTPPAPRAASDDTSAAMFVGTGAGDKNTAGRASATGGG---RRSQVKQPMRRRMFFGFLRR 143
            +  +K+DCVRRLA ELE+LQDNAAEFGSQK+GLTGSWKLIYSSAACEG  G +G DRLT+IEDISYVSENYRLSH+ ++DDLRVYKRV+PP                                     RR   K P+RRR FFGFLRR
Sbjct:    5 LDSQKRDCVRRLATELESLQDNAAEFGSQKSGLTGSWKLIYSSAACEGNGGGRGGDRLTTIEDISYVSENYRLSHSGEQDDLRVYKRVSPPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGVSKLPLRRRTFFGFLRR 152
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BLAST of mRNA_P-lacustris_contig960.15962.1 vs. uniprot
Match: A0A6H5KTQ0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTQ0_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 1.490e-41
Identity = 75/91 (82.42%), Postives = 83/91 (91.21%), Query Frame = 0 
Query:    1 MSCKKQDCVRRLAEELEALQDNAAEFGSQKTGLTGSWKLIYSSAACEGKSGSKG-DRLTSIEDISYVSENYRLSHT-DKDDLRVYKRVTPP 89
            MSCKKQDCVRRLA ELE+LQDNAAEFGSQK+GLTGSWKLIYS AACEGK G +G DRL +IE ISYVSENYRLSH+ ++DDLRVYKRV+PP
Sbjct:  118 MSCKKQDCVRRLATELESLQDNAAEFGSQKSGLTGSWKLIYSRAACEGKGGGRGGDRLPTIEVISYVSENYRLSHSGEEDDLRVYKRVSPP 208
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig960.15962.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1W5_ECTSI3.030e-4258.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KTQ0_9PHAE1.490e-4182.42Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 9..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig960contigP-lacustris_contig960:9393..12616 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig960.15962.1mRNA_P-lacustris_contig960.15962.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig960 8338..12625 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig960.15962.1 ID=prot_P-lacustris_contig960.15962.1|Name=mRNA_P-lacustris_contig960.15962.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=144bp
MSCKKQDCVRRLAEELEALQDNAAEFGSQKTGLTGSWKLIYSSAACEGKS
GSKGDRLTSIEDISYVSENYRLSHTDKDDLRVYKRVTPPAPRAASDDTSA
AMFVGTGAGDKNTAGRASATGGGRRSQVKQPMRRRMFFGFLRR*
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