prot_P-lacustris_contig1002.131.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1002.131.1
Unique Nameprot_P-lacustris_contig1002.131.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length296
Homology
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BLAST of mRNA_P-lacustris_contig1002.131.1 vs. uniprot
Match: A0A6H5JEB8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEB8_9PHAE)

HSP 1 Score: 289 bits (740), Expect = 1.090e-90
Identity = 170/268 (63.43%), Postives = 198/268 (73.88%), Query Frame = 0 
Query:    1 MASNSWRLHVGGVRLLISVLLLFSKPQATH--TAAEPTAHHNQLKK------------DTPAERRSGAAEPAVAVGATALPSGESAKGSTAAEVKMFDFSFSPVGPHGLQDTYAKAAAGAGDGDVEQEPHSAAAVPPSALSLRECSLGDVGVAEFARSPWVCGRTGVRALSLRQNQVTAVGMRALMESLRSSTDS-DRLACLELDFNPIGDAGAQPLPAYLKERAERGGGGLEELSLRFCDIGPAGCRYLSSALLKSATAAKIADNSD 253
            MAS +  L+ GG++LL SVLL  S P+A H  T+A  T+HH++L              DT +  R   AEPA+++   A+P  E   G+T  EV+M DFSFSP+GP GLQDT   AA    +G   + P + +  PPSALSLRECSLGD+GVAE ARSPWV G+ GVRALSLRQNQVTA G+RAL++SLRS+ DS DRLACLELDFNPIGDAGAQPLPAYLKERA RGGGGLEELSLRFCDIGPAGCRYLSSALLKSA AAKI+ N D
Sbjct:    1 MASKASVLNGGGLKLLTSVLLAISTPRAIHCGTSAGSTSHHDRLATAAAPPGDMTPPADTSSRSR---AEPALSI---AIPPREPVTGNTPLEVQMLDFSFSPLGPRGLQDTDIDAAGVVEEGQHHRYPDTNS--PPSALSLRECSLGDLGVAEVARSPWVRGKAGVRALSLRQNQVTAAGVRALLDSLRSAADSGDRLACLELDFNPIGDAGAQPLPAYLKERAARGGGGLEELSLRFCDIGPAGCRYLSSALLKSAAAAKISANDD 260
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BLAST of mRNA_P-lacustris_contig1002.131.1 vs. uniprot
Match: D8LLY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLY3_ECTSI)

HSP 1 Score: 257 bits (657), Expect = 1.090e-74
Identity = 146/200 (73.00%), Postives = 162/200 (81.00%), Query Frame = 0 
Query:   55 AEPAVAVGATALPSGESAKGSTAAEVKMFDFSFSPVGPHGLQDTYAKAAAGAGDGDVEQEPHSAAAVPPSALSLRECSLGDVGVAEFARSPWVCGRTGVRALSLRQNQVTAVGMRALMESLRSSTDS-DRLACLELDFNPIGDAGAQPLPAYLKERAERGGGGLEELSLRFCDIGPAGCRYLSSALLKSATAAKIADNSD 253
            AEP++AV   A+P  E A G+   EV+M DFSFSP+GP GLQDT   AA    +G   + P++    PPSALSLRECSLGD+GVAE ARSPWV G+ GVRALSLRQNQVTA G+RAL++SLRS+TDS DRLACLELDFNPIGDAGAQPLPAYLKERA RGGGGLEELSLRFCDIGPAG  YLSSALLKSA AAKIA N D
Sbjct:   13 AEPSLAV---AIPPHEPATGNAPLEVQMLDFSFSPLGPRGLQDTDIDAAGVVEEGQQHRHPNTNP--PPSALSLRECSLGDLGVAEVARSPWVRGKAGVRALSLRQNQVTAAGVRALLDSLRSATDSGDRLACLELDFNPIGDAGAQPLPAYLKERAARGGGGLEELSLRFCDIGPAG--YLSSALLKSAAAAKIAANDD 205
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BLAST of mRNA_P-lacustris_contig1002.131.1 vs. uniprot
Match: A0A835Z931_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z931_9STRA)

HSP 1 Score: 115 bits (289), Expect = 2.560e-25
Identity = 76/166 (45.78%), Postives = 91/166 (54.82%), Query Frame = 0 
Query:   81 KMFDFSFSPVGPHGLQDTYAKAAAGAGDGDVEQEPHSAAAVPPSALSLRECSLGDVGVAEFARSPWVCGRTGVRALSLRQNQVTAVGMRALMESLRSSTDSDRLACLELDFNPIGDAGAQPLPAYLKERAERGGGGLEELSLRFCDIGPAGCRYLSSALLKSATAA 246
            +  D SFS VGP G  +  +                S A+  PS L L+ECSLGD G  +   S  V    GV  LSLR N +  VG R+L++ LR  T  DRL  L LDFN IGDAG QPLPA LK+ +    G LE LSLRFC I  AGCR ++SAL K+   A
Sbjct:   53 QFIDLSFSHVGPVGASEVLSGL--------------SEASAAPSGLLLQECSLGDRGALDVVSSTLVSSPEGVGVLSLRHNHIGRVGSRSLLQHLR--TAPDRLQTLVLDFNLIGDAGLQPLPALLKDSSN---GRLESLSLRFCGISAAGCRSIASALSKAQVNA 199
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1002.131.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JEB8_9PHAE1.090e-9063.43Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LLY3_ECTSI1.090e-7473.00Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A835Z931_9STRA2.560e-2545.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 214..241
e-value: 0.085
score: 22.0
coord: 181..208
e-value: 15.0
score: 8.9
coord: 150..177
e-value: 0.76
score: 18.0
NoneNo IPR availablePANTHERPTHR24113FAMILY NOT NAMEDcoord: 124..242
NoneNo IPR availablePANTHERPTHR24113:SF5RAN GTPASE-ACTIVATING PROTEINcoord: 124..242
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..295
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..31
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..31
score: 0.707
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 126..240
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 185..202
e-value: 0.3
score: 11.2
coord: 217..235
e-value: 0.1
score: 12.7
coord: 153..172
e-value: 0.82
score: 9.9
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 124..257
e-value: 1.6E-17
score: 65.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1002contigP-lacustris_contig1002:37524..39511 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1002.131.1mRNA_P-lacustris_contig1002.131.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1002 36932..39566 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1002.131.1 ID=prot_P-lacustris_contig1002.131.1|Name=mRNA_P-lacustris_contig1002.131.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=296bp
MASNSWRLHVGGVRLLISVLLLFSKPQATHTAAEPTAHHNQLKKDTPAER
RSGAAEPAVAVGATALPSGESAKGSTAAEVKMFDFSFSPVGPHGLQDTYA
KAAAGAGDGDVEQEPHSAAAVPPSALSLRECSLGDVGVAEFARSPWVCGR
TGVRALSLRQNQVTAVGMRALMESLRSSTDSDRLACLELDFNPIGDAGAQ
PLPAYLKERAERGGGGLEELSLRFCDIGPAGCRYLSSALLKSATAAKIAD
NSDTGTDNDNDNQPIGGVSTERGEDEQVDGEMETGVMEGTHCHPP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf