prot_P-lacustris_contig100.101.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig100.101.1
Unique Nameprot_P-lacustris_contig100.101.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length311
Homology
BLAST of mRNA_P-lacustris_contig100.101.1 vs. uniprot
Match: D7FVI2_ECTSI (Peroxin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI2_ECTSI)

HSP 1 Score: 355 bits (912), Expect = 4.150e-110
Identity = 190/254 (74.80%), Postives = 206/254 (81.10%), Query Frame = 0
Query:    1 MVRAMVRLVKTKNCFVNLPAHVARGLAGASEGAVILRLSWDAS----PSTTSPSWTFTSWNGGLSDAQSGAIEVPLALARVAGLAAALDSDAYLSVRVEPAGYVPTASRVCLEPLSSDDWEILEANAEHLEGQMLVQVCVAYTGQIMPIWVHNTSLIALRVVSAETPHGA-AAACVRLTADTEVAVSPKPRRRTRLREGGERQQRFRSSGLLRVAPPPPGWQADGAAARGDC--SGCARPYLLVHPLLSQESTG 247
            MVRA VRLVKTKNCFVN+PAHVARGL GASEGAVILRLSWD +     +TT+PSW F SWNGG+SDAQSGAIEVPLALA+V GLAAALD+D+YLSV  EPAGYVPTASRVCLEPLS DDWEILEANAEHLEG ML QVCVAYTGQ+MPIWVHNTSLI+L+VVS ETP GA AA CVRLTADTEVAVSPK         G  R+QRFRSSGLLRVAPPPPGW+ +  A   +   SGC RPY+L HP    E  G
Sbjct:    1 MVRATVRLVKTKNCFVNIPAHVARGLDGASEGAVILRLSWDGAVAEAAATTTPSWAFASWNGGISDAQSGAIEVPLALAQVLGLAAALDADSYLSVAAEPAGYVPTASRVCLEPLSCDDWEILEANAEHLEGHMLTQVCVAYTGQVMPIWVHNTSLISLQVVSVETPGGAPAAGCVRLTADTEVAVSPKXXXXXXXXXGEPRRQRFRSSGLLRVAPPPPGWKLEETALARNSGGSGCGRPYVLAHPATLTEIDG 254          
BLAST of mRNA_P-lacustris_contig100.101.1 vs. uniprot
Match: A0A6H5L6R6_9PHAE (Peroxin-1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R6_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 1.880e-74
Identity = 140/189 (74.07%), Postives = 149/189 (78.84%), Query Frame = 0
Query:   62 DAQSGAIEVPLALARVAGLAAALDSDAYLSVRVEPAGYVPTASRVCLEPLSSDDWEILEANAEHLEGQMLVQVCVAYTGQIMPIWVHNTSLIALRVVSAETPHGA-AAACVRLTADTEVAVSPKPRRRTRLREGGERQQRFRSSGLLRVAPPPPGWQADGAAAR--GDCSGCARPYLLVHPLLSQESTG 247
            D+ SGAIEVPLALA+V GLAAALDSDAYLSV  EPAGYVPTASRVCLEPLS DDWEILEANAEHLEG ML QVCVAYTGQ+MPIWVHNT LI+L+VVS E P GA AA CVRLTADTEVAVSPK        EG  RQ+RFRSSGLLRVA PPPGW+ +G A    G  SGC RPY+L HP    E  G
Sbjct:    6 DSSSGAIEVPLALAQVMGLAAALDSDAYLSVAAEPAGYVPTASRVCLEPLSCDDWEILEANAEHLEGHMLTQVCVAYTGQVMPIWVHNTLLISLQVVSVEIPGGAPAAGCVRLTADTEVAVSPKXXXXXXXXEGEPRQERFRSSGLLRVASPPPGWKLEGTALGRIGGGSGCGRPYVLAHPATLTEIDG 194          
BLAST of mRNA_P-lacustris_contig100.101.1 vs. uniprot
Match: A0A7S2SM78_9STRA (Peroxin-1 n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SM78_9STRA)

HSP 1 Score: 110 bits (274), Expect = 4.700e-23
Identity = 72/196 (36.73%), Postives = 106/196 (54.08%), Query Frame = 0
Query:    6 VRLVKTKNCFVNLPAHVARGLAGA----SEGAVILRLSWDASPSTTS-----PSWTFTSWNGGLSDAQSGAIEVPLALARVAGLAAALD------SDAYLSVRVEPAGYVPTASRVCLEPLSSDDWEILEANAEHLEGQMLVQVCVAYTGQIMPIWVHNTSLIALRVVSAETPHGAAAACVRLTADTEVAVSPKPR 186
            V +V   N FV +P+   + +  +    S G V LR+ W   P+ +S     PS +F  W   ++D     ++VP+ALA   GL  A+D       D+ L V V    Y P ASRV ++P+++DDWEIL+ +A  +E ++L Q+CV   GQ  P+W+H  + I L+V S        A CVRL  +TEV V+PK R
Sbjct:   14 VVVVNGTNNFVGIPSRFCQNIRASFPQKSHGVVALRIGWLGPPNNSSGGLARPSQSFVGWTSQVADGHF--LQVPVALAESIGLKDAVDFATKTAPDSPLVVSVAVIPYAPVASRVDVDPVTADDWEILQLHANFVESELLSQICVLGPGQQFPMWIHGRTRINLQVSSIALVEKGQALCVRLARNTEVVVAPKLR 207          
BLAST of mRNA_P-lacustris_contig100.101.1 vs. uniprot
Match: D3B6L3_POLPP (Peroxin-1 n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B6L3_POLPP)

HSP 1 Score: 102 bits (255), Expect = 1.440e-20
Identity = 74/182 (40.66%), Postives = 102/182 (56.04%), Query Frame = 0
Query:   13 NCFVNLPAHVARGLAGASE------GAVILRLSWDASPSTTSPSWTFTSWNGGLSDAQSG--AIEVPLALARVAGLAAALDSDAYLSVRVEPAGYVPTASRVCLEPLSSDDWEILEANAEHLEGQMLVQVCVAYTGQIMPIWVHNTSLIALRVVSAETPHGAAAACVRLTADTEVAVSPKPR 186
            NCFV LP  +   L   +E       ++ L LSW    ST         W+GG SD  SG  AIE+   L    G+A        ++V+ +  G VP A+ V +EPL+SDDWEILE + E+LE Q+L QV V   GQI+PIW+H++++I L++V       A +  VRLT   E+AV+PKPR
Sbjct:   12 NCFVCLPPKIVHSLFLLAEKNAISVNSLTLELSW-YDKSTKKERKINVGWSGGASDPSSGPDAIEMNAELGDAIGIA----DHTRVTVKAQ-IGSVPQATSVQVEPLTSDDWEILELHQEYLEQQILNQVNVMTRGQIVPIWIHHSTIIKLKIVDT-----APSEIVRLTNQVEIAVAPKPR 182          
BLAST of mRNA_P-lacustris_contig100.101.1 vs. uniprot
Match: F4PSY5_CAVFA (Peroxin-1 n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PSY5_CAVFA)

HSP 1 Score: 99.4 bits (246), Expect = 2.130e-19
Identity = 69/196 (35.20%), Postives = 106/196 (54.08%), Query Frame = 0
Query:    6 VRLVKTKNCFVNLPAHVARGLAGASEGA-VILRLSWDASPSTTSPSWTFTSWNGGLSDAQ--------SGAIEVPLALARVAGLAAALDSDAYLSVRVEPAGYVPTASRVCLEPLSSDDWEILEANAEHLEGQMLVQVCVAYTGQIMPIWVHNTSLIALRVVSAETPHGAAA------ACVRLTADTEVAVSPKPR 186
            V L  + NCFVNLP  +A  LA  +E   +IL L W    +     + F  W+GG             + ++E+   +A+  GL         + ++   A  V  A+ V +EP++SDDWEILE +AE+LE Q+L Q+ V  +GQI+PIW+H   +I LRV+   TP  ++       + V+L+ D+E+ V+PKPR
Sbjct:    5 VTLRHSPNCFVNLPLKIAHTLAQRNESTQLILELKW-YDKANKEDKYAFVGWSGGXXXXXXXXXXXXXNDSLEMSQEMAQCLGLV----EGQMIRLKAASASAVQKATTVEVEPVTSDDWEILEVHAEYLEEQLLNQINVVSSGQIIPIWIHQKIVIHLRVIDV-TPKSSSXXXXNQPSAVKLSNDSEIIVAPKPR 194          
BLAST of mRNA_P-lacustris_contig100.101.1 vs. uniprot
Match: A0A8J4PXJ1_9MYCE (Peroxin-1 n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PXJ1_9MYCE)

HSP 1 Score: 98.2 bits (243), Expect = 5.270e-19
Identity = 62/180 (34.44%), Postives = 100/180 (55.56%), Query Frame = 0
Query:   13 NCFVNLPAHVARGLAGASE------GAVILRLSWDASPSTTSPSWTFTSWNGGLSDAQSGAIEVPLALARVAGLAAALDSDAYLSVRVEPAGYVPTASRVCLEPLSSDDWEILEANAEHLEGQMLVQVCVAYTGQIMPIWVHNTSLIALRVVSAETPHGAAAACVRLTADTEVAVSPKPR 186
            +CFV+LP  + + L   SE      G++ L L W    +       +  W G  S   SG     + ++   G A  L S   + V+V  +  + +A+ + +EPL+SDDWEILE N+ +LE Q+L QV + + GQI+PIW+H+ ++I LRV+  +      A  V+L+ ++E+ V+PKPR
Sbjct:   12 DCFVSLPPQIIQSLLAHSEKNSRSLGSLSLELGWYDKENKQDKK-VYVGWAGSASSVTSGGNSRCIEMSPQMGAALNLKSGQVVKVKVNTS--ISSATSIQVEPLTSDDWEILEVNSSYLEEQLLNQVNILFVGQIVPIWIHHKTMIQLRVLETQP-----ADVVKLSPNSEIIVAPKPR 183          
BLAST of mRNA_P-lacustris_contig100.101.1 vs. uniprot
Match: A0A3M6T6L0_POCDA (Peroxin-1 n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6T6L0_POCDA)

HSP 1 Score: 98.2 bits (243), Expect = 5.360e-19
Identity = 67/186 (36.02%), Postives = 101/186 (54.30%), Query Frame = 0
Query:    4 AMVRLVKTKNCFVNLPAHVARGLAGASEGAVI-LRLSWDASPSTTSPSWTFTSWNGGLSDAQSGAIEVPLALARVAG--LAAALDSDAYLSVRVEPAGYVPTASRVCLEPLSSDDWEILEANAEHLEGQMLVQVCVAYTGQIMPIWVHNTSLIALRVVSAETPHGAAAACVRLTADTEVAVSPKPR 186
            A VR   +KNCFV+L   +A  +    +G    L+L W+   +       F SW+G ++  + G I    +     G   A  L  D    V VEP   +P+ +R+ ++P+S++DWEILE +A ++E Q+L QV V + GQI+PIW+ N   + +++V+ E      A CVRL   TEV VSPK R
Sbjct:    7 ACVRTNSSKNCFVSLSGDLAEAIGLRIQGQPFALQLQWENGKA-------FASWSGEVTRGKRGVILNDSSSIVQLGKKFADGLGLDDNQQVLVEPVVGIPSCNRINVDPVSANDWEILELHAGYIESQLLNQVRVVFPGQILPIWIENNMCVVVQIVNLEPD----ANCVRLDEFTEVIVSPKTR 181          
BLAST of mRNA_P-lacustris_contig100.101.1 vs. uniprot
Match: A0A5J4YGC6_9CHLO (Peroxin-1 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YGC6_9CHLO)

HSP 1 Score: 97.1 bits (240), Expect = 1.250e-18
Identity = 68/180 (37.78%), Postives = 99/180 (55.00%), Query Frame = 0
Query:   12 KNCFVNLP-AHVARGLAGASEGAVILRLSWDASP---STTSPSWTFTSWNGGLSDAQSGAIEVPLALARVAGLAAALDSDAYLSVRVEPAGYVPTASRVCLEPLSSDDWEILEANAEHLEGQMLVQVCVAYTGQIMPIWVHNTSLIALRVVSAETPHGAAAACVRLTADTEVAVSPKPRR 187
            K+C+V LP A V++  + ++    +L L   A+    ST +P     SW G  S  Q   +E+P ALA   G+A  +      +V V+    +P A  VC+EPLS DDWE++E NA H+E Q+L QV V   GQ  P W    + + L+V +A       A+ V+L  D+EVAV+P+PRR
Sbjct:   27 KSCWVALPPALVSKLYSESASLRAVLELKRSATGRDRSTNAPESWHVSWGGAASKGQH--LEIPAALAGCLGIAQGI------TVSVQVVTDIPEAIGVCVEPLSVDDWEVVEQNAGHMEEQILSQVGVVQAGQAFPFWARQQTKLLLKVTTAHP-----ASLVQLARDSEVAVAPRPRR 193          
BLAST of mRNA_P-lacustris_contig100.101.1 vs. uniprot
Match: F2E3I9_HORVV (Peroxin-1 n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=F2E3I9_HORVV)

HSP 1 Score: 96.3 bits (238), Expect = 2.310e-18
Identity = 68/178 (38.20%), Postives = 99/178 (55.62%), Query Frame = 0
Query:   13 NCFVNLPAHVARGL---AGASEGAVILRLSWDASPSTTSPSWTFTSWNGGLSDAQSG-AIEVPLALARVAGLAAALDSDAYLSVRVEPAGYVPTASRVCLEPLSSDDWEILEANAEHLEGQMLVQVCVAYTGQIMPIWVHNTSLIALRVVSAETPHGAAAACVRLTADTEVAVSPKPR 186
            +C+VNLPAH    +     A+  A+IL +S       +  +  F  W GG   A++G  IE     A   G          +SVR   A  VP A+RV +EPLSSDDWEILEA++E+LE Q+L QVCV + G++ P+W+ + ++  +++V       A A  VRL  D+E  ++PKPR
Sbjct:   12 SCYVNLPAHAVGQIFDQQDANYSALILEVSGINEDGRSVRA--FVGWTGGF--AKNGKTIEFSGPFALTLGFR----ERQKVSVRSSAAKDVPLATRVHVEPLSSDDWEILEAHSEYLEEQILNQVCVVFEGEVFPLWIRHQTMAKIKIVQT-----APAKLVRLANDSEFVIAPKPR 176          
BLAST of mRNA_P-lacustris_contig100.101.1 vs. uniprot
Match: A0A2B4RQK6_STYPI (Peroxin-1 n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RQK6_STYPI)

HSP 1 Score: 95.1 bits (235), Expect = 5.910e-18
Identity = 67/186 (36.02%), Postives = 103/186 (55.38%), Query Frame = 0
Query:    4 AMVRLVKTKNCFVNLPAHVARGLAGASEGAVI-LRLSWDASPSTTSPSWTFTSWNGGLSDAQSGAIEVPLALARVAG--LAAALDSDAYLSVRVEPAGYVPTASRVCLEPLSSDDWEILEANAEHLEGQMLVQVCVAYTGQIMPIWVHNTSLIALRVVSAETPHGAAAACVRLTADTEVAVSPKPR 186
            A VR   +KNCFV+L   +A  +    +G    L+L W+   +       FTSW+G +  ++ G I    +     G   A AL  D    V VEP   + + +R+ ++P+S++DWEILE +A ++E Q+L QV V + GQ++PIW+ N   + +++V  E P+   A CVRL   TEV V+PK R
Sbjct:    7 ASVRTNSSKNCFVSLSGDLAEAVGLRIQGQPFALQLEWENGKA-------FTSWSGEVIHSRRGDILNDSSSIVQLGKKFADALGLDDEQQVLVEPVVGIASCNRISVDPVSANDWEILELHAGYIESQLLNQVRVVFPGQLLPIWIENNMCVVVQIVDLE-PN---ANCVRLDEFTEVIVTPKTR 181          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig100.101.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVI2_ECTSI4.150e-11074.80Peroxin-1 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5L6R6_9PHAE1.880e-7474.07Peroxin-1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxI... [more]
A0A7S2SM78_9STRA4.700e-2336.73Peroxin-1 n=1 Tax=labyrinthulid quahog parasite QP... [more]
D3B6L3_POLPP1.440e-2040.66Peroxin-1 n=1 Tax=Polysphondylium pallidum (strain... [more]
F4PSY5_CAVFA2.130e-1935.20Peroxin-1 n=1 Tax=Cavenderia fasciculata (strain S... [more]
A0A8J4PXJ1_9MYCE5.270e-1934.44Peroxin-1 n=1 Tax=Polysphondylium violaceum TaxID=... [more]
A0A3M6T6L0_POCDA5.360e-1936.02Peroxin-1 n=2 Tax=Pocillopora damicornis TaxID=467... [more]
A0A5J4YGC6_9CHLO1.250e-1837.78Peroxin-1 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996... [more]
F2E3I9_HORVV2.310e-1838.20Peroxin-1 n=1 Tax=Hordeum vulgare subsp. vulgare T... [more]
A0A2B4RQK6_STYPI5.910e-1836.02Peroxin-1 n=2 Tax=Stylophora pistillata TaxID=5042... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015342Peroxisome biogenesis factor 1, N-terminal, psi beta-barrel foldPFAMPF09262PEX-1Ncoord: 105..183
e-value: 4.2E-24
score: 84.8
NoneNo IPR availableGENE3D3.10.330.10coord: 100..185
e-value: 2.0E-27
score: 97.3
NoneNo IPR availablePANTHERPTHR23077AAA-FAMILY ATPASEcoord: 50..192
IPR025653Peroxisome biogenesis factor 1PANTHERPTHR23077:SF12PEROXISOME BIOGENESIS FACTOR 1coord: 50..192
IPR029067CDC48 domain 2-like superfamilySUPERFAMILY54585Cdc48 domain 2-likecoord: 101..183
IPR009010Aspartate decarboxylase-like domain superfamilySUPERFAMILY50692ADC-likecoord: 3..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig100contigP-lacustris_contig100:45946..48968 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig100.101.1mRNA_P-lacustris_contig100.101.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig100 45755..49041 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig100.101.1 ID=prot_P-lacustris_contig100.101.1|Name=mRNA_P-lacustris_contig100.101.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=311bp
MVRAMVRLVKTKNCFVNLPAHVARGLAGASEGAVILRLSWDASPSTTSPS
WTFTSWNGGLSDAQSGAIEVPLALARVAGLAAALDSDAYLSVRVEPAGYV
PTASRVCLEPLSSDDWEILEANAEHLEGQMLVQVCVAYTGQIMPIWVHNT
SLIALRVVSAETPHGAAAACVRLTADTEVAVSPKPRRRTRLREGGERQQR
FRSSGLLRVAPPPPGWQADGAAARGDCSGCARPYLLVHPLLSQESTGGIA
VKFEGPVALRHPRRWWPCCIPVDFTPAQRGASSSVAGRVVVQARERKGNR
HPPGRRGTTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015342PEX-N_psi_beta-barrel
IPR025653Pex1
IPR029067CDC48_domain_2-like_sf
IPR009010Asp_de-COase-like_dom_sf