prot_P-lacustris_contig1103.867.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1103.867.1
Unique Nameprot_P-lacustris_contig1103.867.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length151
Homology
BLAST of mRNA_P-lacustris_contig1103.867.1 vs. uniprot
Match: D8LJX3_ECTSI (Pathogenesis-related protein, class 1 n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJX3_ECTSI)

HSP 1 Score: 166 bits (419), Expect = 3.440e-46
Identity = 85/158 (53.80%), Postives = 110/158 (69.62%), Query Frame = 0
Query:    1 IQDATSAAPPTIHASRSLQGSYNRNSEASSDDYDNSHLEEYLGCFKDDEGDPLLEFAFMSGYCIVDRCYKHCTNEGATFMAVKYDLECSCGFGKEEDYTVNGMGKCGSCLWSDGERNCDRVNSFDLFPLG------EEMTPTP--SSTGLPMPTGFPI 150
            +Q ATSAAPPT  ASR L+ S + +S++ S+DY    L  Y+GCF+DDE  PLLEF F+SG  I++RCY HCT+EGATFM +KY  +CSCGFG+EEDYT+NG G+C    + + + NC    +FDL+ LG        +TP+P  SS G PMPTGFPI
Sbjct:   37 VQHATSAAPPTRQASRHLRDSDDSSSDSDSNDYSPKGL--YVGCFQDDEQSPLLEFGFISGGFIIERCYMHCTDEGATFMGIKYGFQCSCGFGQEEDYTLNGTGECTCGCYGERDGNCGGQWAFDLYSLGGGDDSSTSVTPSPTASSIGFPMPTGFPI 192          
BLAST of mRNA_P-lacustris_contig1103.867.1 vs. uniprot
Match: A0A6H5JCL1_9PHAE (SCP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCL1_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 2.450e-32
Identity = 75/154 (48.70%), Postives = 96/154 (62.34%), Query Frame = 0
Query:    1 IQDATSAAPPTIHASRSLQGSYNRNSEASSDDYDNSHLEEYLGCFKDDEGDPLLEFAFMSGYCIVDRCYKHCTNEGATFMAVKYDLECSCGFGKEEDYTVNGMGKCGSCLWSDGERNCDRVNSFDLFPLG---EEMT-----PTPSSTGLPMPT 146
            +Q ATSA PPT  ASR L+ S + +S + S+ Y  S  E Y+GCF+DDE   LLEF F+SG   V+RC+ HCT+EGATF+ +KY  +CSC FG+EEDYT+NG G+     W+           FDL+ LG   +  T     PT SSTG PMPT
Sbjct:   43 VQHATSATPPTRQASRHLRDSDDSSSGSDSNGY--SPWELYVGCFQDDEQSTLLEFGFISGGFNVERCFMHCTDEGATFLGLKYGFQCSCDFGQEEDYTLNGPGE--RLRWA-----------FDLYSLGGGDDSSTSVTSLPTASSTGFPMPT 181          
BLAST of mRNA_P-lacustris_contig1103.867.1 vs. uniprot
Match: A0A6H5JZI7_9PHAE (SCP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZI7_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 1.180e-20
Identity = 46/87 (52.87%), Postives = 60/87 (68.97%), Query Frame = 0
Query:   71 HCTNEGATFMAVKYDLECSCGFGKEEDYTVNGMGKCGSCLWSDGERNCDRVNSFDLFPL--GEEMT------PTPSSTGLPMPTGFP 149
            HCT+EGATFM +KY  +CSCGFG+EE+YT+NG G+C    + D + NC    +FDL+ L  G++ +      PT SSTG PMPTGFP
Sbjct:    2 HCTDEGATFMGLKYGFQCSCGFGQEEEYTLNGTGECACGCYGDRDGNCGGQWAFDLYSLRGGDDSSTSVTPSPTASSTGFPMPTGFP 88          
BLAST of mRNA_P-lacustris_contig1103.867.1 vs. uniprot
Match: D8LJW7_ECTSI (Pathogenesis-related protein, class 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJW7_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 2.580e-13
Identity = 53/142 (37.32%), Postives = 74/142 (52.11%), Query Frame = 0
Query:    1 IQDATSAAPPT-IHASRSLQGSYNRNSEASSDDYDNSHLEEYLGCFKDDEGDPLLEFAFMSGYCI-VDRCYKHCTNEGATFMAVKYDLECSCGFGKEEDYTVNGMG-KCG-SCLWSDGERNCDRVNSFDLFPLGEEMTPTPS 138
            +Q ATSA+PPT  HASR L             D D S  E Y+GCF D + D +L+    S   +  ++CY+HC   GA +MA ++  EC C   K+ +Y  +G G +C  SC   +GE  C   ++FDL+ LG      PS
Sbjct:   30 VQHATSASPPTRSHASRHLY------------DSDTSKYE-YIGCFTDSQEDRILDDMLTSRTDMSTEKCYEHCMEMGAEYMATQWAQECFCSNNKDLEYDRHGSGAECDMSCTGVEGE-TCGGNHAFDLYKLGGSADNPPS 157          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1103.867.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LJX3_ECTSI3.440e-4653.80Pathogenesis-related protein, class 1 n=3 Tax=Ecto... [more]
A0A6H5JCL1_9PHAE2.450e-3248.70SCP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JZI7_9PHAE1.180e-2052.87SCP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LJW7_ECTSI2.580e-1337.32Pathogenesis-related protein, class 1 n=1 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 38..130
score: 7.58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1103contigP-lacustris_contig1103:18426..20410 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1103.867.1mRNA_P-lacustris_contig1103.867.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1103 18425..20410 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1103.867.1 ID=prot_P-lacustris_contig1103.867.1|Name=mRNA_P-lacustris_contig1103.867.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=151bp
IQDATSAAPPTIHASRSLQGSYNRNSEASSDDYDNSHLEEYLGCFKDDEG
DPLLEFAFMSGYCIVDRCYKHCTNEGATFMAVKYDLECSCGFGKEEDYTV
NGMGKCGSCLWSDGERNCDRVNSFDLFPLGEEMTPTPSSTGLPMPTGFPI
P
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002889WSC_carb-bd