prot_P-lacustris_contig1059.536.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1059.536.1
Unique Nameprot_P-lacustris_contig1059.536.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length130
Homology
BLAST of mRNA_P-lacustris_contig1059.536.1 vs. uniprot
Match: D8LCD7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCD7_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 3.870e-44
Identity = 93/138 (67.39%), Postives = 104/138 (75.36%), Query Frame = 0
Query:    1 MKLFSTTTALLCLASAAEGFVFAPPLSKVGLVASAKQECSTPRMVMPGAASSMTT--------VLQSALVPLIAASG-TADPGTVDAPGWVLPLGAVAVILTAGLIPLLLKARMCCPGDDAARDMQERDEALWEQNKK 129
            MKLFSTTTA+LCLASAA+GFV APP S+  + A  +Q C+  RMV P  A+            VLQS++VPLIAA+G  A+PGTVDAPGWVLP GAVAVILTAGLIPLLLK     PGDDAARDMQERDE LWEQNKK
Sbjct:    1 MKLFSTTTAVLCLASAADGFVVAPPSSRASVAAPGRQ-CT--RMVSPLPAAXXXXXXXXXXXXVLQSSVVPLIAAAGGVAEPGTVDAPGWVLPAGAVAVILTAGLIPLLLK-----PGDDAARDMQERDEGLWEQNKK 130          
BLAST of mRNA_P-lacustris_contig1059.536.1 vs. uniprot
Match: A0A835YTE3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTE3_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.140e-11
Identity = 34/52 (65.38%), Postives = 42/52 (80.77%), Query Frame = 0
Query:   74 GTVDAPGWVLPLGAVAVILTAGLIPLLLKARMCCPGDDAARDMQERDEALWE 125
            G+V APGWVLP+GA+ V+ TA LIP+LLK     PGDDAARDMQ+RD+ LW+
Sbjct:   65 GSVAAPGWVLPVGALVVVATA-LIPILLK-----PGDDAARDMQQRDKDLWD 110          
BLAST of mRNA_P-lacustris_contig1059.536.1 vs. uniprot
Match: A0A7R9UEM1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEM1_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 2.610e-8
Identity = 33/73 (45.21%), Postives = 45/73 (61.64%), Query Frame = 0
Query:   57 LQSALVPLIAASGTADP-----GTVDAPGWVLPLGAVAVILTAGLIPLLLKARMCCPGDDAARDMQERDEALW 124
            L +A  PL+A +   D      GTV+APGWVLP+ A+  I     +P+LL+     PGDDAAR+MQERD + +
Sbjct:   27 LTAAAAPLVALAQEMDNDEIAYGTVEAPGWVLPVVALLTISLTAAVPILLQ-----PGDDAAREMQERDASFY 94          
BLAST of mRNA_P-lacustris_contig1059.536.1 vs. uniprot
Match: A0A7R9YFB9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFB9_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 4.970e-8
Identity = 33/73 (45.21%), Postives = 45/73 (61.64%), Query Frame = 0
Query:   57 LQSALVPLIAASGTADP-----GTVDAPGWVLPLGAVAVILTAGLIPLLLKARMCCPGDDAARDMQERDEALW 124
            L +A  PL+A +   D      GTV+APGWVLP+ A+  I     +P+LL+     PGDDAAR+MQERD + +
Sbjct:   57 LTAAAAPLVALAQEMDNDEIAYGTVEAPGWVLPVVALLTISLTAAVPILLQ-----PGDDAAREMQERDASFY 124          
BLAST of mRNA_P-lacustris_contig1059.536.1 vs. uniprot
Match: A0A7S3REY2_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3REY2_EMIHU)

HSP 1 Score: 51.2 bits (121), Expect = 1.470e-5
Identity = 35/92 (38.04%), Postives = 53/92 (57.61%), Query Frame = 0
Query:   26 LSKVGLVASAKQECSTPRMVMPGAASSMTTVLQSALVPLIAASGTADPGTVDAPGWVLPLGAVAVILTAGLIPLLLKARMCCPGDDAARDMQ 117
            +S   + A+A   C+ P  + P  AS++ +V  S +  ++ A G    G VDAP WVLP+GA+AV+ TA L+P+LL      PG++A    Q
Sbjct:   31 VSPARVSAAAASRCAAPTALAPVDASAVHSVA-SLVAEIVQADGERAYGAVDAPLWVLPVGAIAVVATA-LVPILLS-----PGEEAFNQQQ 115          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1059.536.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LCD7_ECTSI3.870e-4467.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YTE3_9STRA1.140e-1165.38Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9UEM1_9STRA2.610e-845.21Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7R9YFB9_9STRA4.970e-845.21Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S3REY2_EMIHU1.470e-538.04Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 102..129
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..80
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..101
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.772
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 45..67
NoneNo IPR availableTMHMMTMhelixcoord: 82..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1059contigP-lacustris_contig1059:47530..49486 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1059.536.1mRNA_P-lacustris_contig1059.536.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1059 47530..49486 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1059.536.1 ID=prot_P-lacustris_contig1059.536.1|Name=mRNA_P-lacustris_contig1059.536.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=130bp
MKLFSTTTALLCLASAAEGFVFAPPLSKVGLVASAKQECSTPRMVMPGAA
SSMTTVLQSALVPLIAASGTADPGTVDAPGWVLPLGAVAVILTAGLIPLL
LKARMCCPGDDAARDMQERDEALWEQNKK*
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