prot_P-lacustris_contig987.16165.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig987.16165.1
Unique Nameprot_P-lacustris_contig987.16165.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length400
Homology
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BLAST of mRNA_P-lacustris_contig987.16165.1 vs. uniprot
Match: D8LHQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ5_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 7.440e-20
Identity = 69/138 (50.00%), Postives = 82/138 (59.42%), Query Frame = 0 
Query:  270 SRSFDGLFGELFHRTFAGLMRSPEGNSGEHSASPGWAEVSSEGEEDGHELLVGEAFGRSAKERRLQT---------------STDN-GGNYQLEIVASTGATSTDWNDALYKLEVGMVVPGQTGVPQTLITDGTIDEG 391
            SRSF G+ G+LF  TFAGL++S E  SGE S SP + E   E  ED       E  GRSA+ RR +                  DN GGNYQ+EIVASTG TST+WN A Y+LEVG VVPGQT    +L+  GTI+EG
Sbjct:  606 SRSFGGMLGDLFRGTFAGLLQSWEEGSGERS-SPAFEE---EEGEDARLFGAAEWSGRSAQARRRRLYXXXXXXXXXXXXXGDNDNTGGNYQVEIVASTGDTSTNWNGAAYRLEVGTVVPGQTLPSSSLLAFGTINEG 739
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BLAST of mRNA_P-lacustris_contig987.16165.1 vs. uniprot
Match: A0A6H5L752_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L752_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 1.430e-12
Identity = 61/158 (38.61%), Postives = 75/158 (47.47%), Query Frame = 0 
Query:  252 TVSEKWSAHNHDAVYSLLSRSFDGLFGELFHRTFAGLMRSPEGNSGEHSAS--PGWAEVSSEGEEDGHELLVGEAFGRSAKERRLQTSTDNG----------------GNYQLEIVASTGATSTDWNDALYKLEVGMVVPGQTGVPQTLITDGTIDEG 391
            T   + SAH      +  SRSF G+ G LF  TFAGL++S E  SGE S+    G  +      ED       E  GRSA+ R                         GNYQ+EIVASTG TS       Y+LEVG VVPGQ+    +L+  GTI+EG
Sbjct:  573 TAERRRSAHGAVDSSTSPSRSFGGMLGNLFRGTFAGLLQSREEGSGERSSPVFEGEDDXXXXXGEDARLFGAAEWSGRSAQARXXXXXXXXXXXXXXXXXXXXXXXXXGNYQVEIVASTGDTSXXXXXXXYRLEVGTVVPGQSLPSSSLLAFGTINEG 730
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig987.16165.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHQ5_ECTSI7.440e-2050.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L752_9PHAE1.430e-1238.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig987contigP-lacustris_contig987:54075..56969 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig987.16165.1mRNA_P-lacustris_contig987.16165.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig987 43344..59821 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig987.16165.1 ID=prot_P-lacustris_contig987.16165.1|Name=mRNA_P-lacustris_contig987.16165.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=400bp
MGAEAGGDAARRARCEPQNRARGCASVGTARCGTTQSRPRVVVRHGVSQR
RRRADGRGGGEGGGEGGAEELLESLLAGLIRLMNFKGIPPSRLFEQHSER
EGEQGLQADGYHQDFEDYPRERQTTKRRWPQASVGGGGGGGGAAPSAQGG
GSWTEAFDVSDLNGAAINQRYGEGYGSSHGASSTMMSQNSRFGSSSSSSG
VAHTADGLYRSSSGGIDRGSEDSGSFFRAEPSQKEGGESAENRAQGVPPP
PTVSEKWSAHNHDAVYSLLSRSFDGLFGELFHRTFAGLMRSPEGNSGEHS
ASPGWAEVSSEGEEDGHELLVGEAFGRSAKERRLQTSTDNGGNYQLEIVA
STGATSTDWNDALYKLEVGMVVPGQTGVPQTLITDGTIDEGTHRLTYRR*
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